Suncus etruscus (white-toothed pygmy shrew): 126006116
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Entry
126006116 CDS
T09902
Symbol
ATG12
Name
(RefSeq) ubiquitin-like protein ATG12 isoform X1
KO
K08336
ubiquitin-like protein ATG12
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04068
FoxO signaling pathway
setr04136
Autophagy - other
setr04140
Autophagy - animal
setr04621
NOD-like receptor signaling pathway
setr04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
126006116 (ATG12)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
126006116 (ATG12)
04136 Autophagy - other
126006116 (ATG12)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
126006116 (ATG12)
04622 RIG-I-like receptor signaling pathway
126006116 (ATG12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126006116 (ATG12)
04121 Ubiquitin system [BR:
setr04121
]
126006116 (ATG12)
03029 Mitochondrial biogenesis [BR:
setr03029
]
126006116 (ATG12)
Membrane trafficking [BR:
setr04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
126006116 (ATG12)
Ubiquitin system [BR:
setr04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
126006116 (ATG12)
Mitochondrial biogenesis [BR:
setr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
126006116 (ATG12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APG12
ATG8
Motif
Other DBs
NCBI-GeneID:
126006116
NCBI-ProteinID:
XP_049627420
LinkDB
All DBs
Position
4:167200836..167208223
Genome browser
AA seq
143 aa
AA seq
DB search
MAEEPDAALRLPAPAPVPAAEGDAPPEASPDSAPPEPPSPAAASPGSEEPAGDARKKIDI
LLKAVGDTPIMKTKKWAVERTRTIQGLIDFIKKFLKLVASEQLFIYVNQSFAPSPDQEVG
TLYECFGSDGKLVLHYCKSQAWG
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggagcccgacgccgctctccggctgcccgcgcccgcgcccgtccccgccgcc
gagggcgacgcgccgcccgaggcgtcccccgactcggcgcccccggagccgccttccccc
gccgccgcctccccgggctcggaggagcccgcgggcgacgccaggaagaaaattgacatc
ttactaaaggctgtaggagacactccaataatgaaaacaaagaagtgggctgtggagcga
acccggactatccaaggactcattgacttcatcaaaaagttcctcaaacttgtggcctca
gaacaattgtttatttatgtcaatcagtcctttgccccttccccagaccaagaggttgga
accctgtatgagtgttttggtagtgatggtaaactggtcttacattactgcaagtctcaa
gcctggggatga
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