Suncus etruscus (white-toothed pygmy shrew): 126006124
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Entry
126006124 CDS
T09902
Symbol
FUBP1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126006124 (FUBP1)
03041 Spliceosome [BR:
setr03041
]
126006124 (FUBP1)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
126006124 (FUBP1)
Spliceosome [BR:
setr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
126006124 (FUBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
Secretin_N
Motif
Other DBs
NCBI-GeneID:
126006124
NCBI-ProteinID:
XP_049627432
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All DBs
Position
4:complement(30860281..30888601)
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AA seq
660 aa
AA seq
DB search
MADYSTVPPPSSGSAGGGGGGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNS
NDYGYGGQKRPLEDGDQPDAKKVAPQNDSFGTQLPPMHQQQSRSVMTEEYKVPDGMVGFI
IGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAP
GFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPL
RITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNG
EMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSVQAGNPGGPG
PGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRN
PPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGPHGVPGPHGPPGPP
GPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQAPPDPAKAGTDPNSA
AWAAYYAHYYQQQAQPPPAAPAGAPAAAQTNGQGDQQNPAPAGQVDYTKAWEEYYKKMGQ
AVPAPAGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQGFANHARSHHHLY
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcagactactccacggtgccgccaccttcctcgggttccgccggtggcggaggcggc
ggcggtggcggcggcggcggaggcggaggcggcgtgaacgatgctttcaaagatgcgctg
cagagagcccggcagattgcagcaaagattggaggtgatgctggtacatcgctgaattca
aatgactatggttatgggggacaaaaaagacctttggaagatggagatcagccagatgct
aagaaagttgctcctcaaaatgattcttttggaacacagttaccaccgatgcatcagcaa
caaagcaggtctgtaatgacagaagaatacaaagtcccagatggaatggttggatttata
attggtagagggggtgaacagatctcacgtatacagcaggaatctggatgcaaaattcag
atagctccagacagtggcggccttccagaaaggtcttgtatgttaactggcactccagaa
tctgttcaatcagcaaaacgattattagaccagattgttgaaaaaggaagaccagcccct
ggcttccatcatggtgatggacctggaaatgcagttcaagaaatcatgattccagctagc
aaagcaggattagttattggaaagggaggagagactattaaacaacttcaggaaagggct
ggtgttaaaatggttatgattcaagatggaccgcagaacactggtgctgacaaacctctt
aggattacaggagatccatacaaagttcaacaagccaaggaaatggtgttagagttaatt
cgtgatcaaggtggtttcagggaagttcgaaatgagtatggatcaagaataggaggaaat
gaagggatagatgtccccattccaagatttgctgttggcattgtcataggaagaaatgga
gagatgattaaaaaaatacaaaatgatgctggtgttcgaattcagtttaagccagatgat
ggaacaacacctgatagaatagcacaaataacgggacctccagatagatgtcagcacgct
gcagaaattattacagatcttcttcgaagtgttcaggctggtaatcctggtggacctgga
cctggtggccgaggaagaggtagaggtcaaggcaattggaacatgggaccacctggtgga
ctacaggagtttaatttcattgtaccaactgggaaaactggcttaataataggaaaagga
ggtgaaaccataaaaagtataagtcaacagtctggtgcaagaatagaacttcagagaaat
cctccacctaatgcagatcctaatatgaagttattcacaattcgtgggactccacagcaa
atagattatgctcggcaactcatagaagaaaagattggtggcccagtaaatcctttaggg
ccacctgtaccccatgggccccacggtgtcccaggcccacatgggcctcctgggccacca
ggccctggaactccaatgggaccatacaaccctgcaccttataatccaggaccaccgggt
cctgctccacatggtcctccagccccatatgccccccaagggtggggaaatgcatatcca
cattggcagcaacaagctcctcctgatccagctaaggcaggaacagatccaaattcagca
gcatgggctgcatattatgctcactattatcagcagcaagcacagccaccacccgcagct
cctgctggtgcaccagctgcagcccaaactaatggacaaggtgatcagcagaatccagct
ccagctggacaggttgattataccaaggcttgggaagagtactataagaaaatgggtcaa
gcagttcctgctcctgccggggctcctccaggtgggcaaccagattatagtgcagcctgg
gctgagtactatagacaacaagctgcttactatgcccagacgagtccccagggaatgcca
caacatcctccagcacctcagggatttgcaaatcatgcaagaagccaccaccatttatat
taa
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