Suncus etruscus (white-toothed pygmy shrew): 126006169
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Entry
126006169 CDS
T09902
Symbol
HDAC10
Name
(RefSeq) polyamine deacetylase HDAC10
KO
K18671
histone deacetylase 10 [EC:
3.5.1.98
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04613
Neutrophil extracellular trap formation
setr05034
Alcoholism
setr05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
126006169 (HDAC10)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
126006169 (HDAC10)
09165 Substance dependence
05034 Alcoholism
126006169 (HDAC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
setr03036
]
126006169 (HDAC10)
Enzymes [BR:
setr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
126006169 (HDAC10)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
126006169 (HDAC10)
BRITE hierarchy
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
126006169
NCBI-ProteinID:
XP_049627457
LinkDB
All DBs
Position
4:549899..557569
Genome browser
AA seq
693 aa
AA seq
DB search
MGTALVYHEAMTAARLLWDDPECAIERPERLAAVLERLRERGLEQRCLGLQAREASEAEL
HLVHSPEYVALVRGTQALDTPELRALSAKFDAVYFHPATFHCARLAVGAALQLVDAVLTG
TVRNGLALVRPPGHHSQRAAANGFCVFNNVAIAARHAMQTHGVRRVLIVDWDIHHGQGTQ
YIFEDDPSVLYFSWHRYEFGRFWPHLRESDVDSVGRGLGRGFTVNLPWNQVGLGNADYVA
AFLHVLLPLAFEFNPELILISAGFDSAIGDPEGQMQATPECFAHLTQLLQPLARGRICAV
LEGGYHLESLAQSVCMTLQALLGDPAPPLSGNMEPHCSALESIERVRASHAPHWASIQAE
GQGASAQPEDSVVGREPNCPLEPIAPLGPHPCSPPPNPLPLLPGDPEFKETEASTEATLS
SLRNQLHFHLLPPVRVAAVLAVSDATLDLPPDVLCQEDSAPAEETQTWARRHAALAQDMA
LGTLGKLLCLLDWIRAEQVSSGFAAIPGPALVATLDVAVRSSLAHGSQRLLCVTGEQLDR
PLDLADDGRTLWLQLGAEEAAVPSMFHVSIPMPETAGGFLSYLFTLVLPLAYSFRPDLVL
VVLGPAHGLQAPQAALLVALLQGPVGGRVVVLMEEVSTAQLAGVLARVLRGDSPPSLGPF
SAPSPEDTQALKGLRQQLEPQWKMLQVAAPVKR
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggggacggcgctcgtctaccacgaggccatgaccgcggccaggctgctgtgggacgac
cccgagtgcgcgatcgagcgtcccgagcgcctggccgccgtcctggagcgcctgcgggag
cggggcctggagcagcggtgcctcggcctgcaagcccgcgaggcctcggaggccgagctg
cacctggtgcacagtcccgagtacgtggctctcgtgcgggggacccaggccttggacacc
ccggagctgcgagcgctctcggcaaagtttgacgccgtctacttccacccggcgaccttc
cattgtgccaggctggccgtgggtgctgcgctgcagctggtggacgctgtgctgaccgga
actgttcgcaacggcctggccctggtgaggccgcctgggcaccacagccagcgagccgct
gccaacggattctgtgtgttcaacaacgtggccatagcagccagacacgccatgcagacc
cacggcgtgcgcagggtcctcattgtggactgggacattcaccatggccaaggcacccag
tatatcttcgaagatgaccccagcgtcctttacttctcctggcaccgctatgaatttggg
cgtttctggcctcacctgagggagtcggatgtggattccgtggggagggggctaggccgt
ggcttcacggtgaacctgccctggaaccaggtgggtttggggaatgctgactacgtggct
gccttcctgcatgtgctgctcccgctggcttttgagttcaatcctgagctgattctcatc
tctgcaggattcgactccgccattggggaccctgaggggcagatgcaggccacccccgag
tgcttcgcacacctcacccagttgttgcagccgctggccagaggcaggatctgcgctgtc
ctggagggtggctaccacctggagtctctggcacaatccgtttgcatgacgctgcaggca
ctgctgggggaccctgccccacccttgtctgggaacatggaaccgcactgcagcgccctg
gagtccatcgagagggtgagggcctcgcacgcccctcactgggccagcatccaggccgaa
ggtcagggggcctcagcccagccggaggacagcgtcgtgggccgagagcccaactgtccc
ctagagccaattgctccgctgggtccccacccctgctccccgccgccaaatcccttacct
ctgctgcctggggaccctgagttcaaggagactgaagcttcgacagaagccaccctgagt
tccctccggaaccagctccacttccatctgctgccacctgttcgtgtggctgctgtcctg
gctgtgtcggatgccaccctggacctgccccctgatgtcctttgtcaggaggactcagcc
ccagcagaggagacacagacctgggccaggcgacacgcggcactggcccaggacatggcc
ttggggaccctagggaagcttctgtgcttactggactggattcgggctgagcaggtcagc
agtggtttcgcagctatcccgggtcctgctctggtggctaccctggacgttgctgtccgt
tccagtctggcccatggatcccagaggctgctctgtgtgacgggggaacagttggatcgg
cccctggaccttgctgatgacgggaggactctgtggctgcaacttggggccgaggaggcg
gctgttccatccatgttccacgtctccataccaatgccagagacggctggtggattcctg
agttacctctttaccctggtgctgccgctggcctatagtttccggcctgacttggtgctg
gtggtgctggggccagcacatggcctgcaggccccgcaagccgctctcctggtcgcattg
ctgcaggggcctgtggggggcagagttgtggtcctgatggaagaggtctccacagcccag
ctggccggggttctggctcgggtgctgcgtggagactcaccccccagcctgggccccttc
tccgcgccctcccctgaggacacgcaggccctgaagggcctgagacagcagctggagcca
cagtggaagatgctgcaggtggcggctcccgtgaagcgttga
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