Suncus etruscus (white-toothed pygmy shrew): 126006231
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Entry
126006231 CDS
T09902
Symbol
RHOT1
Name
(RefSeq) mitochondrial Rho GTPase 1 isoform X1
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
126006231 (RHOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
setr03029
]
126006231 (RHOT1)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
setr04031
]
126006231 (RHOT1)
Mitochondrial biogenesis [BR:
setr03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
126006231 (RHOT1)
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
126006231 (RHOT1)
GTP-binding proteins [BR:
setr04031
]
Small (monomeric) G-proteins
Rho Family
Miro
126006231 (RHOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
EF-hand_7
Arf
MMR_HSR1
EF-hand_6
EF-hand_1
SRPRB
RsgA_GTPase
Dynamin_N
AAA_22
Rad4
EF-hand_5
EF-hand_8
AAA_25
Motif
Other DBs
NCBI-GeneID:
126006231
NCBI-ProteinID:
XP_049627545
LinkDB
All DBs
Position
1:complement(162975335..163056630)
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AA seq
672 aa
AA seq
DB search
MRAGRARPLRAGAMKKDVRILLVGEPRVGKTSLIMSLVSEEFPEEVPPRAEEITIPADVT
PERVPTHIVDYSEAEQSDEQLHQEISQANVICIVYAVNNKHSIDKVTSRWIPLINERTDK
DSRLPLILVGNKSDLVEYSSMETILPIMNQYTEIETCVECSAKNLKNISELFYYAQKAVL
HPTGPLYCPEEKEMKSACIKALTRIFKISDQDNDGTLNDAELNFFQRICFNTPLAPQALE
DVKNVVRKHISDGVADSGLTLKGFLFLHTLFIQRGRHETTWTVLRRFGYDDDLELTPEYL
FPLLKIPPDCTTELNHHAYLFLQSTFDKHDLDRDCALSPDELKDLFKVFPYIPWGPDVNN
TVCTNERGWITYQGFLSQWTLTTYLDVQRCLEYLGYLGYSILTEQESQASAITVTRDKKL
DLQKKQTQRNVFRCNVIGMKNCGKSGVLQALLGRNLMRQKKIREDHKSYYAINTVYVYGQ
EKYLLLHDISESEFLTEAEIICDVVCLVYDVSNPKSFEYCARIFKQHFMDSRIPCLIVAA
KSDLHEVKQEYSISPTDFCRKHKMPPPQAFTCNTADAPSKDIFVKLTTMAMYPHARLRCM
CACNRCTFCICQNFLNSDLLQSVKNKIFTAVLNRHVTQADLKSSTFWLRASFGATVFAVL
GFAMYKALLKQR
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcgggccgagcgcggcccctccgagccggcgccatgaagaaagacgtgcggatc
ctgctggtgggagaacctagagttgggaagacgtcactgattatgtctctggtcagtgaa
gaattcccagaagaggttcctccccgggcagaagaaatcaccattccagctgatgtgacc
cctgagagagttccaacacacatcgtagattactctgaagcagaacaaagtgatgaacaa
ctacatcaagaaatatcacaggctaatgtcatctgcatagtttatgctgttaataacaaa
cattctattgataaggtaacaagtcgatggatacctctcataaatgaaaggacagacaaa
gacagcaggttgcctttgatactggttgggaacaaatctgatctggtggaatatagcagt
atggagaccatccttcctattatgaaccagtacacagagatagaaacctgtgtggagtgc
tcagcaaaaaacctgaagaacatatctgagctattttattatgcacagaaagcagttctt
catcctacagggcccttgtactgcccggaggagaaagagatgaagtcagcctgtataaaa
gcccttactcgaatatttaaaatatctgatcaggataacgatggtactctcaatgatgct
gaactcaacttttttcagagaatttgtttcaacactccattagctcctcaagctctggaa
gatgtcaagaatgtagtgagaaaacatataagtgatggcgtggcagacagtggattgacg
ctgaaaggttttctttttttacatacactttttatccagagagggagacatgaaaccact
tggactgtgcttcgaagatttggttatgatgatgatctggaactgacacctgaatattta
tttcccttattaaaaatacctcctgattgcactactgaattaaatcatcatgcatatctg
tttctccagagtacctttgacaagcatgatttggatagagactgtgctctgtcgcctgat
gagcttaaagatttgtttaaagttttcccttatataccttggggaccagatgtcaataat
acagtttgcacaaatgaaagaggatggataacgtaccagggatttctttcccaatggacg
ctcaccacctatttagacgtgcaacgatgtctggagtatttgggctatctaggctattcg
attctgactgagcaagaatctcaagcttcagccattacagtaacaagagataaaaagtta
gaccttcagaaaaaacaaacccaaagaaatgtgttcagatgtaatgtaattgggatgaag
aactgtgggaaaagtggtgttcttcaggctctccttggaagaaacttaatgagacagaag
aaaattcgtgaagatcataaatcctactatgcgatcaacactgtttatgtgtatggacaa
gagaaatatttattgttgcatgatatctcggaatcggaatttcttactgaggctgagatc
atttgtgatgttgtgtgcctggtgtatgatgtcagtaaccccaaatccttcgaatactgt
gccaggatttttaagcaacactttatggacagcagaataccttgcttaatcgtagctgca
aagtcagacctgcatgaagttaaacaagaatacagtatttcacctactgatttctgcaga
aaacacaaaatgcctccaccacaagccttcacttgcaatactgctgatgcacccagtaaa
gatatctttgttaaattgacaaccatggccatgtacccccatgcccggttacgctgtatg
tgcgcctgcaacaggtgtacattttgcatctgtcagaacttcctcaactcagacttgctg
caatctgtaaagaacaaaatcttcactgcagttcttaacaggcacgtgacacaagctgac
ctcaagagctccacgttttggcttcgagcaagtttcggtgctactgtgtttgcggttttg
ggctttgctatgtacaaagcattattgaaacaacgatga
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