Suncus etruscus (white-toothed pygmy shrew): 126006232
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Entry
126006232 CDS
T09902
Symbol
DDX17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
setr03041
]
126006232 (DDX17)
Enzymes [BR:
setr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126006232 (DDX17)
Spliceosome [BR:
setr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
126006232 (DDX17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
126006232
NCBI-ProteinID:
XP_049627541
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Position
4:complement(6118914..6138676)
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AA seq
650 aa
AA seq
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MRGGGFGDRDRDRDRGGFGARGGGGLALKKFGNPGERLRKKKWDLSELPKFEKNFYVEHP
EVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQC
QGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQ
VQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRC
TYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINV
GNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMR
RDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSS
EDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGG
GGGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGYANGSGY
GSPNSAFGAQAGQYTYGQGTYGAAAYGTSGYTAQEYGAGTYGASSTASTGRSSQSSSQQF
SGLGRSGQQPQPLMSQQFAQPPGATSMINYMGQTAYQYPPPPPPPPPSRK
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgggggcggcttcggggaccgcgaccgggaccgcgaccgcggcggatttggagca
agaggtggcggtggccttgccttgaagaaatttggtaatcctggagagcggttgcgtaaa
aagaagtgggatttgagcgagctccctaaatttgagaagaatttttatgtggaacatcca
gaagtggcaaggctgacaccatatgaagttgatgaactacgtcgaaaaaaagagattaca
gtgcgagggggtgatgtgtgtcccaagcctgtttttgccttccatcatgctaacttccca
cagtatgtcatggatgtgctgatggatcaacacttcacagaaccaactccgattcagtgc
cagggatttcctttggctcttagtggccgggatatggtgggcattgctcagactggctct
gggaagacattggcgtatttgcttcctgcaattgttcatattaaccaccagccatacttg
gaaaggggagatggcccaatctgtctggttttggctccaaccagagagcttgcccagcaa
gtccagcaggtggctgatgactatggcaagtgctctagattgaagagcacatgcatttat
ggaggtgctcccaagggcccccaaattcgagacttggaaagaggtgtggaaatttgtata
gctactcctggacgcctgatagatttcctggagtcaggaaagacaaatcttcgtcgatgc
acttaccttgtactggatgaggctgacagaatgctcgatatgggttttgagcctcagatc
cgtaaaattgttgaccaaatcaggcccgataggcagacattgatgtggagtgctacctgg
ccaaaagaagtacggcagctggcggaggatttccttcgtgattatacccagatcaatgtg
ggcaacctggagctgagtgccaaccacaatatcctccagattgtggacgtctgcatggag
agcgagaaggaccacaagttgatccaactcatggaggaaataatggctgagaaagaaaat
aagacaataatatttgtggagacaaagagacgctgtgatgacctcacccgcaggatgcgc
agagatggctggccagctatgtgtattcatggagataagagtcaaccagaacgagattgg
gtgcttaatgagttccgttctggaaaggctcccatcctcattgccacagacgtagcctcc
cgagggctagatgtggaagacgtcaagtttgtcatcaactatgactatccaaacagctct
gaagattacgtgcatcggattggccgaacagctcgtagcaccaacaagggcactgcttat
accttcttcactccggggaatctcaagcaggcccgagagctgatcaaagtgctggaggag
gccaaccaggccatcaacccaaagctcatgcaactggtggaccacagaggcggaggcggc
ggagggggaggtcgttcccggtatcggaccacttcttcggccaataatcccaatctgatg
tatcaggatgagtgtgaccggagacttcgaggagtcaaggatggtggccggagagactca
gcaagctatcgagatcgcagtgaaaccgatagagcgggttatgctaacggcagtggctat
ggaagtcccaactctgcctttggtgcccaggctggccagtatacctatgggcaaggcacc
tatggggccgccgcctacggtaccagtggctatacagcccaggagtacggggctggcact
tacggggccagcagcaccgcctcaacagggagaagttcacagagctctagccagcagttc
agtgggctcggccggtccggccagcagccacagcctctcatgtcccagcagtttgctcaa
cccccaggagccaccagcatgataaattacatggggcagacagcctaccagtacccgcca
cccccgccaccaccacccccctcccgcaagtga
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