Suncus etruscus (white-toothed pygmy shrew): 126006253
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Entry
126006253 CDS
T09902
Symbol
NUP50
Name
(RefSeq) nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03013
Nucleocytoplasmic transport
setr05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126006253 (NUP50)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
126006253 (NUP50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126006253 (NUP50)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126006253 (NUP50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
126006253
NCBI-ProteinID:
XP_049627584
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All DBs
Position
4:complement(2066914..2073804)
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AA seq
442 aa
AA seq
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MAKRIAEKELTDRNWDQEDEVEEVGTFSVASEEVLRSRAIKKAKRRNPSTEPDGGGAFQG
FKGLVAPSGGSVVGFGIVGKPLEGLTNGTGISPLTSTPKAVLGAANGPASLGNTKGPKPR
NGDAQQPPSGSAPGSAYHKQLAALNRSVRDWIVKHVDANPLCDLTPIFTDYEKYLAGIEQ
QHGGARSEFGSEASQASGESEATSLFGAPKSQPSAAFSFHTSDDSSEGASAKAEPAATST
GVSFSFGKKVDSSVLTTLSPTPLPGLSFSSSNTNLFGKDTPQNKPTASPFSKEVVEGQGE
GGSGGKGTAEDEDSDEPPKVVVTEVKEEDAFYSKKCKLFYKKDDEFKEKGIGTLHLKPTA
NQKTQLLVRADTNLGNILLNVLVPPNMPCTRTGKNNVLIVCVPNPPLDDKNPSVPVPMLV
RVKTAEDADELHRILLERRGGP
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagaattgctgagaaagaattgactgacagaaactgggaccaagaagatgag
gtcgaggaggtgggcaccttctctgtggccagcgaggaggtactgaggagcagagccatc
aagaaggccaagcgcaggaaccctagcacagagcctgatggcggaggtgccttccaaggc
ttcaaaggtctggtcgccccatctggaggcagcgtcgtgggctttggcatagttgggaag
ccgctggagggactgaccaacgggactggcatctccccactcaccagcacccccaaggcc
gtcctgggtgccgccaacggcccggcctccttggggaacacgaagggccccaagccccgc
aatggggatgcgcagcagccaccctccggatcagcccctggtagcgcctaccacaaacag
ctggcggccctcaaccgctcggtgcgggactggatcgtgaagcacgtggatgcaaacccc
ctatgcgacctgacccccatcttcaccgactacgagaagtacctggctggcatcgagcag
cagcacggcggagcccggagtgagttcggaagcgaagccagccaggcttccggggagtcg
gaggcaacctcgctgtttggtgcccccaagtcacagccctcggcggccttctcatttcac
accagtgatgactcctcagaaggcgcctcggccaaggcggagccagcggccaccagcacg
ggcgtctcattcagcttcggcaagaaggtcgacagctctgtcctgaccacgctcagcccc
acacccctgcccgggctttcattttcctctagcaacaccaatttatttggcaaagatact
ccccagaacaagcccactgcctcgcccttctccaaggaggttgtggaaggccagggggaa
ggtggcagtggcggcaaaggcactgccgaagacgaggacagtgatgagccacccaaggtc
gtcgtcacggaagtgaaagaggaagatgctttctattccaagaagtgcaaactcttctac
aagaaggacgatgagttcaaggagaagggcattgggaccctgcacctgaagcccacagcc
aaccagaagacgcagctgctggtgcgcgccgacaccaaccttggcaacatcctcctgaat
gtgctggtgccccccaacatgccgtgcacacggactggcaagaacaacgtcctcatcgtg
tgtgtccccaacccgccgctggacgacaagaaccccagcgtgcctgtgcccatgctggtg
cgggtcaagacggcggaagatgctgacgagctgcatcggatcctgctggagagacgcggt
ggcccctga
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