Suncus etruscus (white-toothed pygmy shrew): 126006284
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Entry
126006284 CDS
T09902
Symbol
DDX52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
setr03009
]
126006284 (DDX52)
Enzymes [BR:
setr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126006284 (DDX52)
Ribosome biogenesis [BR:
setr03009
]
Eukaryotic type
90S particles
Helicases
126006284 (DDX52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
Cas3-like_C_2
BRD4_CDT
MCM3_WHD
Motif
Other DBs
NCBI-GeneID:
126006284
NCBI-ProteinID:
XP_049627633
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All DBs
Position
1:170380503..170405544
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AA seq
611 aa
AA seq
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MDAHDLFRRLGSGARFDVRRFSADASRFQVGKRKYNFDSSEVLQRLDFFGNKKSVPGESG
TSAILKSQDEEEKEQLTERKREQNKKRRKKMSSEIIPEEEESTIQWISSVEAKIEDKKIK
KETKLTSGKLENLRIEKINFFRNKHKIHVQGTDLPDPIATFQQLDQEYKISSQLLQNILG
AGFQTPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPENKGFRALIISP
TRELATQIHRELVKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQ
DPPGIDLTSVEWLVVDESDKLFEDGKTGFREQLASIFLACTSHKVRRAMFSATFAYDVEQ
WCKLNLDNVVSVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSI
ERAKELFHELIYEGINVDVIHADRTQQQRDNTVQSFRAGKIWVLICTALLARGIDFKGVN
LVINYDFPTSSVEYIHRIGRTGRAGHKGKAVTFFTEDDKPLLRSVANVIQQAGCPVPEYI
KGFQKLLSKQKKKMIKKPLERASISTTPKYFLEKAKEKQKKPTGQKNSKKKVAVKDKSLK
KKTLKDSKNSL
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggacgctcacgatctctttcggcgcctggggtcgggcgccaggttcgacgtgagacgc
ttctcggcggacgcgtcgcgattccaggttgggaaaaggaaatacaactttgattcatca
gaggtgcttcagagactggacttctttggaaacaagaaatcagttccaggagagtctggc
acatcagcaatacttaaatcccaagatgaagaggaaaaagaacaacttactgaaaggaag
agggaacaaaacaaaaaaaggaggaaaaagatgtcttcagaaattattcctgaagaagaa
gagtctactattcaatggatatcatctgtggaagcaaagatagaagataaaaaaattaaa
aaagaaactaaactaacttcaggaaagttggaaaatctcagaatagaaaagataaacttc
ttccgaaataaacacaaaattcatgttcaaggaactgatcttcctgacccaattgctacg
tttcagcaacttgaccaggaatataaaatcagttctcaactgcttcagaatattctaggt
gcaggctttcagacacctacaccaatccagatgcaggctattccagttatgctccatggt
cgagaacttctggcttctgctcctactggatctggaaagactttggcttttagcattcct
attttaatgcagctaaaacaaccagaaaataaaggcttcagagctctgattatctcacca
acacgagaacttgctactcagattcaccgagagctggtgaaaatctctgagggaacagga
tttaggatacacatgatacacaaagcagcagtggcagccaagaaatttggacctaaatct
tctaagaaatttgatattcttgtgacaactccaaatcgacttatctacttattgaagcaa
gatccaccaggaatagatttgacaagtgttgaatggctggtggtagatgaatctgacaag
ctgtttgaagatggcaaaactgggtttagagaacagctggcatctattttcctagcctgc
acctcccacaaggtcagaagagctatgttcagtgcaacctttgcatatgatgttgagcag
tggtgcaaacttaatctggacaatgtcgtttctgtatccattggagcaaggaattctgca
gtagagactgtagaacaagaacttctctttgttgggtctgaaactggaaaacttctggca
atgagggagcttgttaaaaagggtttcaatccacctgttcttgtttttgttcagtccatt
gaaagggcaaaagaactttttcatgaactcatatatgaaggtattaacgtggatgttatt
catgcagacagaactcaacaacagagagataacacggtccagagcttcagagctggaaag
atctgggttcttatttgtacagccttgcttgccagagggattgattttaaaggtgtgaac
ttggtgatcaactatgattttcctaccagttccgttgaatatatccacaggataggtcga
actggaagagctgggcataagggaaaagctgttacatttttcactgaagatgataagcca
ttattaagaagtgttgccaatgtaatacagcaggctggatgtcctgtaccagaatacatc
aagggtttccaaaaactgctaagcaaacaaaagaaaaaaatgattaagaagccattggaa
agggcaagtattagtacaacaccaaaatacttcttagaaaaagctaaagaaaaacagaaa
aaacccactggtcaaaaaaacagcaagaagaaagtagcagttaaagacaaaagtttaaaa
aaaaaaactttaaaagacagtaagaacagtttgtga
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