Suncus etruscus (white-toothed pygmy shrew): 126006427
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Entry
126006427 CDS
T09902
Symbol
CSGALNACT1
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
setr01100
Metabolic pathways
Module
setr_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
126006427 (CSGALNACT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
setr01003
]
126006427 (CSGALNACT1)
Enzymes [BR:
setr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
126006427 (CSGALNACT1)
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
126006427 (CSGALNACT1)
Glycosyltransferases [BR:
setr01003
]
Glycan extension
O-Glycan
126006427 (CSGALNACT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
FlxA
DUF3450
DUF2524
Motif
Other DBs
NCBI-GeneID:
126006427
NCBI-ProteinID:
XP_049627807
LinkDB
All DBs
Position
4:152553828..152641263
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AA seq
536 aa
AA seq
DB search
MADCGVMMVRRGLLPWVSRVVVLLVLLCCAISVLYMLACTPKGDEEQLGLPRANGPTGKD
GYQAVLQEWEEQNRNYISSLKKQISQLKEELQERSAQLKITQHHSKEPVGLELPAPTEKN
QADLVAFLHSQMDRAEVHTGVKLATEYAAVPFDSFTLQKVYQLETGLTRHPEEKPVRKDK
REELVEAIESALETLNSPVESSQKQRTYTTSDFIEGIYRTEKDKGTLYELTFKGDQKHEF
RRLVLFRPFGPIMKVKKERLNMANTLINIIVPLAKRVDKFRQFMQNFREMCIQQDGRIHL
TVVYFGKEEMNEVKGILENTSKTANFRNFTFIQLNGEFSRGKGLDVGARFWKRSNVLLFF
CDVDIYFTSEFLNTCRLNTQPGKKVFYPVLFSQYNPGIIYGHHDAVPPLEQQLVIKKETG
FWRDFGFGMTCQYLSDFINIGGFDLDIKGWGGEDVHLYRKYLHSNLIVVRTPVRGLFHLW
HEKRCMDELTPEQYKMCMQSKAMNEASHGQLGMLVFQHEIEAHLRKQKQKTSSKKT
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggctgattgtggagtgatgatggttcgcagggggctgcttccgtgggtctcccgagtg
gtggtgttgctggtgctcctctgttgtgccatctctgtgctctacatgttagcgtgcaca
ccaaaaggtgatgaggagcagttagggctacccagggcaaatgggcccacagggaaagat
gggtaccaagctgttctgcaggagtgggaggagcagaaccgaaattacatcagcagcctc
aagaagcagatctctcagctcaaggaagaactgcaggagaggagcgcacagctcaagatc
acacagcaccattccaaagagcctgtgggtcttgagctcccagcacccactgagaaaaac
caggctgacctggtggccttcctgcactcacagatggaccgagccgaggtgcacactggt
gtcaagctggccactgagtatgcggctgtgcctttcgacagtttcaccctgcaaaaggta
taccagctggaaactggcctgactcgccacccagaggagaagccagtgaggaaagacaag
cgggaagagttggtcgaagcaattgagtcagccctggagaccctaaacagccctgtggag
agcagtcagaagcagcgcacttacacgacctctgacttcatagaagggatttaccgaaca
gaaaaggataaaggcactttgtatgaactcacttttaaaggggatcaaaagcatgaattc
agacgacttgttttatttcggccatttggccctatcatgaaagtgaaaaaagaaagactc
aacatggccaatacacttatcaatattatcgtgccactggcaaagagagtggataagttt
cggcagttcatgcagaatttcagggagatgtgcatacagcaggatggtagaatccacctc
acagttgtttactttggaaaagaagaaatgaatgaagtcaaaggaattcttgaaaacact
tccaaaactgccaacttcaggaactttaccttcattcaactgaatggagaattttctcgg
ggaaagggacttgatgttggagctcgcttctggaagcgaagcaatgtcctcctctttttc
tgtgatgtggacatctacttcacttccgaatttctcaatacctgtagactgaacacacaa
ccagggaagaaggtattttatccagtccttttcagccagtacaacccaggtataatatat
ggccatcatgatgcagtccctcctttagaacagcagctggtcataaagaaggaaactgga
ttttggagagactttggatttgggatgacatgtcaatacctctcagacttcatcaatata
ggtgggtttgacttggacatcaaaggctggggtggagaggatgtgcacctctatcgcaag
tacctccatagcaacctcatagtagtgcggacacctgtgcgaggacttttccacctgtgg
catgagaaacgctgcatggatgagctgactcctgaacagtataagatgtgcatgcagtcc
aaggccatgaacgaagcatcccatgggcagctgggcatgctagttttccagcatgaaata
gaggctcaccttcgcaaacaaaagcagaagacgagtagcaaaaaaacataa
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