Suncus etruscus (white-toothed pygmy shrew): 126006448
Help
Entry
126006448 CDS
T09902
Name
(RefSeq) farnesyl pyrophosphate synthase-like
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr00900
Terpenoid backbone biosynthesis
setr01100
Metabolic pathways
setr05164
Influenza A
setr05166
Human T-cell leukemia virus 1 infection
Module
setr_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
126006448
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
126006448
05164 Influenza A
126006448
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
setr01006
]
126006448
Enzymes [BR:
setr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
126006448
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
126006448
Prenyltransferases [BR:
setr01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
126006448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
NCA2
Motif
Other DBs
NCBI-GeneID:
126006448
NCBI-ProteinID:
XP_049627836
LinkDB
All DBs
Position
4:complement(155892890..155894053)
Genome browser
AA seq
352 aa
AA seq
DB search
MNGGKNSDVVSQEKQEFLQYFPEIVKLLTEDDLDHPEIGDVITRLKEILEYNTLGGKYNR
GMTVVAAYWELVGPKKQDAKNIQRALTVGWGVELLQTFYLMIDDIMDSSITRRGKLCWYK
KPGIGLDAVNDSLMVEACIYRLLKLCCRDQPYYLNLIELFLEITYLSEVGQSLDVMTAPQ
DSVDLGRFTEKRHKDIVVYKTAFYSYLPVAAAMYMAGIDDEKTHANAKRILLEMGAFFQI
QDDYLDFFGDLSVTGKIGTDIEDNKCSWLVVQCMQRASPEQRQILQEYYGQKDPKKVAKV
KALYEEMDLRGVFTRYEEDSYNPLVSLVEKDAKPLPPSIFLRLAQKIYKRRK
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaggcaagaattcagatgtagttagccaagagaagcaggaattcctccagtac
ttccctgagattgttaagttgctgacagaagatgacctggaccaccctgagataggagat
gtgatcactcgtctcaaggagatcctggagtacaacacgcttgggggcaaatacaatcgg
ggcatgacagtggtggctgcctactgggagctggttgggcccaagaagcaggatgccaag
aatatccagcgtgccctcactgtgggctggggtgtggaactgctccaaactttctacctg
atgatagatgacatcatggattcgtccataactcgccgggggaagctctgttggtataag
aagccgggcataggtctggatgctgtgaatgattctttgatggtggaggcctgtatctat
cgtctgttgaagctctgctgccgggatcagccctattacctgaacctcattgaactcttc
ctagagataacctatctgagtgaagttgggcagtctttagatgtcatgacagccccacaa
gacagtgtggatcttggcagattcaccgaaaagaggcacaaagacattgtcgtatataag
accgccttctactcctaccttcctgtggctgctgccatgtacatggcaggcattgacgat
gagaagactcatgctaatgccaagagaatcctcctagagatgggagcgttctttcaaata
caggatgattatctggacttctttggggacctcagtgtgacaggcaagattggcaccgac
attgaggacaacaagtgcagctggctggtggtccagtgtatgcagcgggcttcgccagag
cagcgtcagatcctccaggaatactatgggcagaaggatcccaagaaggtggctaaagtg
aaggcgctctatgaggaaatggatctgcgcggcgtgttcacacggtatgaagaagacagc
tacaatccccttgtgagcctcgtggagaaggatgcgaagcccctgccaccgagcatcttc
ctgaggctggcacagaagatctataaacgcagaaaatga
DBGET
integrated database retrieval system
