Suncus etruscus (white-toothed pygmy shrew): 126006469
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Entry
126006469 CDS
T09902
Symbol
LSM1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126006469 (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126006469 (LSM1)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126006469 (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
126006469 (LSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
126006469
NCBI-ProteinID:
XP_049627858
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All DBs
Position
4:complement(146626641..146650842)
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AA seq
133 aa
AA seq
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MNYMPGTASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIP
RGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRVEQQTKLEAEKLKVQALKDR
GLSIPRADTLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactatatgcctggcaccgccagcctcatcgaggacatcgacaaaaaacacttggta
ctattgcgagatggaaggacacttataggctttttgaggagcattgatcagtttgctaac
ttagtgctacatcagactgtggagcgtattcatgtgggcaaaaaatacggtgatattcct
cgaggaatttttgtggtcagaggagaaaatgtggtcctcctaggagaaatagacttggaa
aaggagagtgacacaccccttcaacaagtatctattgaagaaatcctggaagagcaaaga
gtggaacagcagacaaagctggaagcagagaagctgaaagttcaggcacttaaggaccga
gggctctccattcctcgagctgatactctagatgagtattag
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