Suncus etruscus (white-toothed pygmy shrew): 126006540
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Entry
126006540 CDS
T09902
Symbol
NOP2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
setr03009
]
126006540 (NOP2)
Enzymes [BR:
setr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
126006540 (NOP2)
Ribosome biogenesis [BR:
setr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
126006540 (NOP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
FtsJ
Methyltransf_31
PCMT
Methyltransf_25
FTA4
BMT5-like
Ubie_methyltran
Methyltransf_15
Motif
Other DBs
NCBI-GeneID:
126006540
NCBI-ProteinID:
XP_049627968
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All DBs
Position
4:complement(14417746..14432948)
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AA seq
603 aa
AA seq
DB search
MGRKLDPTKKEKRGPGRKARKQKGAETELARFLPAGDDENAKRLSSRARKRAAKRRLNSA
EAPETNKLTGVKPLLGKPSKEAVQCPGKKGAQALFPTARAKKRPAPPHSSEDEEEEDEDD
SAEEGVAKQGNLWDSDDSDAAMIDDYGVDSASEDEDDEELLPIEKAARKQKAQEAVAGDW
TEESSDEEEGLSPDSGPGKDEEDEDGDSGDLQINVDADAFVLPPAGENEQDAQAPDLQRV
HQRIQDIVGVLRDFATRREEGRSRAEYLNRLQKDLATYYSYGDFLLGKLMDLFPLSELVE
FLEANEVPRPITLRTNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVVYDSSVPIGATP
EYLAGHYMLQGASSMLPVMALAPQEHERVLDMCCAPGGKTSYIAQLMKNTGVILANDANA
ERLKSVVGNLHRLGVTNTIISHYDGRQFPKVAGGFDRVLLDAPCSGTGVISKDPAVKTNK
DEKDILRCAHLQKELLLSAIDSVSATSKTGGYIVYCTCSIMVEENEWVVDYALNKRNVRL
VPTGLDFGQEGFTRFRERRFHPTLRSTRRFYPHTHNMDGFFIAKFKKFANFIPQSQPQPQ
PGE
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcaagttggacccgaccaagaaggagaagcgcgggccgggccgcaaggccagg
aagcagaagggcgccgagaccgagctggcccggttcctgcccgcaggtgacgatgaaaat
gccaagcggctgtccagccgtgcccggaagagggctgctaagaggaggctgaattctgct
gaagcccctgagacaaacaagttgactggggtcaaaccgttgctcggaaagccatcaaaa
gaagctgtccagtgtcctggtaaaaaaggggcccaggctttattccccactgctcgggcc
aagaagcgtccagcgccacctcacagcagcgaggatgaggaggaggaagatgaggatgac
tctgcagaggagggtgtggcaaaacaggggaacctttgggactctgatgacagcgatgcc
gctatgattgatgactatggcgtcgactctgcatctgaggatgaagatgatgaagagctg
ctgcccattgaaaaggctgctcggaagcagaaggcccaggaagctgttgcgggtgactgg
actgaggagtcgtctgatgaagaggaggggctgtcccctgactcagggcctgggaaggat
gaagaggatgaagatggagactctggggatctccagatcaatgtggacgctgatgctttt
gtactgccccctgctggcgagaacgagcaggatgcccaggcacctgacttgcagcgggtt
caccagcgcatccaagacattgtgggggtgctgcgtgattttgccacccggcgcgaggag
ggtcggtctcgggccgagtacctgaaccggctccagaaggatctggccacttactattcc
tatggcgacttcctgcttggcaaactcatggacctcttcccactgtctgagctggtggag
tttttagaagctaacgaggtgccgaggcccatcacgctcaggaccaataccttgaagacc
cgacgccgagacctggctcaggcactcatcaaccgaggcgttaacctggaccccttgggc
aagtggtccaagactggacttgtggtctatgattcgtcggtgcccattggcgcaactccc
gagtatttggccgggcactacatgctgcagggggcctctagcatgttgccagtcatggcc
ttggcgccccaggaacacgagcgcgtcctcgacatgtgctgtgcccctggcgggaagacc
agctacatagcccagctgatgaagaacacgggggtgatcctcgccaatgatgccaatgcc
gagcgcctcaagagcgtggtgggcaacctacaccgtttgggggtcaccaacaccatcatc
agccactatgacgggcgtcagttccccaaggtggctggaggctttgaccgtgtcctgttg
gatgccccctgcagcggcaccggggtcatctccaaggaccctgcggtgaagaccaataag
gatgagaaggacatccttcgttgtgcccacctgcagaaggagctactcttgagcgccatc
gactcagtcagtgccacctccaagacaggcggctacatagtctactgcacctgctccatc
atggtggaggagaatgagtgggtggtggactatgccctgaacaagagaaacgtgcggctg
gtgcccaccgggctagacttcggccaggagggcttcacacgcttccgtgagcggcgcttc
cacccgacgctgcgttccactcgacgcttctacccgcatacccacaacatggacggcttc
ttcatcgccaagttcaagaagtttgctaactttatcccccagtcgcagccccagccccag
cccggtgagtga
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