Suncus etruscus (white-toothed pygmy shrew): 126006695
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Entry
126006695 CDS
T09902
Symbol
LRRC8D
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D
KO
K22038
volume-regulated anion channel
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
setr04040
]
126006695 (LRRC8D)
Ion channels [BR:
setr04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
126006695 (LRRC8D)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_4
LRR_8
LRR_14
LRR_R13L1-DRL21
LRR_At5g56370
LRR_9
LRR_5
Motif
Other DBs
NCBI-GeneID:
126006695
NCBI-ProteinID:
XP_049628147
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Position
4:42644896..42816358
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AA seq
858 aa
AA seq
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MFTLAEVASLNDIQPTYRILKPWWDVFMDYLAVVMLMVAIFAGTMQLTKDQVVCLPVLPS
PVNSKAHTTPGNTDVTTPISKMEAATDQDQEGQTTNDISFVTSAVTPDIPLRATYPHTDS
TAPSPESRKEKRNPTGRKTNLDFQQYVFINQMCYHLALPWYSKYFPYLALIHTIILMVSS
NFWFKYPKTCSKVEHFVSILGKCFESPWTTKALSETACEDSEENKQRITGAQTLPKHVST
SSDEGSPSASTPMINKTGFKFSAEKPVIEVPSMTILDKKDGEQAKALFEKVRKFRAHVED
SDLIYKLYVVQTVVKTAKFIFILCYTANFVNAISFEHVCKPKVEHLTGYEVFECTHNMAY
MLKKLLISYISIICVYGFICLYTLFWLFRIPLKEYSFEKVREESSFSDIPDVKNDFAFLL
HMVDQYDQLYSKRFGVFLSEVSENKLREISLNHEWTFEKLRQHVSRNAQDKQELHLFMLS
GVPDAVFDLTDLDVLKLELIPEAKIPAKISQMTNLQELHLCHCPAKVEQTAFSFLRDHLR
CLHVKFTDVAEIPAWVYLLKNLRELYLIGNLNSENNKMIGLESLRELRHLKILHVKSNLT
KVPSNITDVAPHLTKLVIHNDGTKLLVLNSLKKMMNVAELELQNCELERIPHAIFSLSNL
QELDLKSNNIRTIEEIISFQHLKRLTCLKLWHNKIVTIPPSITHVKNLESLYFSNNKLES
LPLAVFSLQKLRCLDVSYNNISMLPIEIGLLQNLQHLHITGNKVDLLPKQLFKCVKLRTL
NLGQNCITSLPEKISQLSQLTQLELKGNCLDRLPAQLGLCRLLKKSGLVVEDHLFDTLPL
EVKEALNQDINVPFANGI
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgtttacccttgcggaagttgcttcactcaatgacattcagccaacttaccgaatcctg
aaaccatggtgggatgtgtttatggattatctggctgtcgttatgttgatggtagccatc
tttgcaggaaccatgcaacttaccaaagatcaggtggtctgcttgccagtattgccatct
cctgtaaattcaaaggcacacacgacaccaggaaataccgacgtgaccacccccatctcg
aaaatggaagcagccactgaccaagaccaagagggacagacgacaaatgacatttccttt
gttacatctgctgtgacacctgacatacctctcagagccacatatcctcacacagattcc
acagctccaagtccagagtccaggaaagagaagagaaatcccacaggacgaaaaacaaac
ttggattttcagcaatatgtatttattaatcagatgtgttaccatctggcccttccatgg
tattctaagtactttccataccttgcacttatacatactataattctcatggtcagtagc
aacttttggttcaaatatcccaaaacctgctcaaaagtggaacattttgtttcaatatta
gggaagtgctttgaatctccttggactacaaaagctttgtctgagacagcatgcgaagac
tcggaggaaaacaagcagagaataactggtgcccagactttaccaaagcatgtgtctacc
agcagcgatgaagggagtcctagtgccagtaccccaatgatcaacaaaactggcttcaaa
ttctcagcagagaaacctgtgatcgaagtccctagcatgaccatcctggataagaaagat
ggggaacaggccaaagctctctttgagaaagtaaggaagttccgagctcatgtggaagac
agtgacttaatctataaactctatgtggtccagaccgttgtcaagacggccaagttcatt
ttcattctctgctatactgcaaactttgtcaatgcgatcagcttcgagcacgtctgcaaa
cccaaagtggagcacttaactggttacgaggtgtttgagtgcacccacaatatggcgtac
atgctgaaaaagcttctgatcagttacatatccattatctgcgtttatggttttatctgc
ctctacactctcttctggttattcaggatcccgttgaaggaatattcttttgaaaaagtt
agagaagagagcagtttcagtgacatcccagatgtcaaaaatgattttgcattcctcctc
cacatggtagaccagtacgaccagctctattccaaacgttttggagtcttcttgtcagaa
gtcagtgaaaataaacttagggaaatcagtttgaaccacgaatggacttttgaaaagctc
cggcaacatgtgtcacgcaatgcccaggacaagcaggagttacatctctttatgctgtct
ggtgtgcccgatgctgtctttgacctcacagacctggacgtgctcaagcttgaactgatt
ccagaagcaaaaatccctgctaagatctctcagatgacaaatctccaagagcttcacctc
tgccactgccctgcaaaagtggaacagactgcttttagttttctccgggatcatttgaga
tgccttcacgtgaagtttactgacgtagctgaaatccctgcttgggtgtatttgcttaag
aacctccgagagttgtatttgataggcaatttgaactcagaaaataataagatgataggc
cttgaatctctccgagagttgcgacaccttaagattctccacgtgaagagcaatttgacc
aaagtcccctcaaacattacagatgtggccccacatcttacaaagttagtcattcataat
gacggcacgaaactcttggtattgaacagccttaagaaaatgatgaatgtcgctgagctt
gagctccagaactgtgagctcgagaggattccacacgctattttcagtctctcgaatttg
caggaactggatttaaaatcgaacaatatacgcaccattgaggaaatcatcagtttccaa
cacttaaaacgactgacttgtctaaaattatggcataataaaatcgttaccattcctccc
tccatcacccatgtcaaaaacctggagtcactttatttctctaacaacaagctcgaatcc
ttaccactggcagtgtttagtttacagaaactcagatgcttagacgtaagctacaacaac
atttcaatgcttcccatagaaataggattacttcagaacctgcagcatttgcatatcact
gggaacaaagtggaccttctgcccaaacaattgtttaaatgcgtcaagttgaggactttg
aatctggggcaaaactgcatcacctccctcccagaaaaaattagccagctctcgcagctc
acgcagctggagctgaaggggaattgcttggaccgcctgccagcccagctgggcctgtgt
cgcctgctcaagaagagcgggcttgttgtggaagatcacctttttgacaccctgccactc
gaagtcaaagaagcattgaatcaagacataaatgtcccctttgcgaatgggatttaa
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