KEGG   Suncus etruscus (white-toothed pygmy shrew): 126006741
Entry
126006741         CDS       T09902                                 
Name
(RefSeq) DNA polymerase beta-like
  KO
K02330  DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03410  Base excision repair
setr05166  Human T-cell leukemia virus 1 infection
setr05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:setr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    126006741
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    126006741
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    126006741
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:setr03400]
    126006741
Enzymes [BR:setr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     126006741
DNA repair and recombination proteins [BR:setr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     126006741
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     126006741
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_lambd_f HHH_8 DNA_pol_B_thumb HHH_5 HHH Cdd1 HHH_2 NTP_transf_2
Other DBs
NCBI-GeneID: 126006741
NCBI-ProteinID: XP_049628222
LinkDB
Position
4:55578189..55579517
AA seq 335 aa
MSKRKAPQETLNGGITDMLTELDNFEKNVNQAIHKYNAYRKAASVIAKYPHKIKSGAEAK
KLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVTGIGPSAARKFVDEGIK
TLEDLRKNEEKLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLNEVNKVDSEYIATVCGS
FRRGAESSGDMDVLLTHPSFTSESTKQPKLLHRVVEQLQKVHFITDTLSKGETKFMGVCQ
LPSKSDGTEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRP
LGVTGVAGEPLPVESEKDIFDYIQWKYREPKDRSE
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgagcaaacggaaggcgccgcaagagactctcaacgggggtatcaccgacatgctcaca
gaactcgacaactttgagaagaatgtgaaccaggctattcacaagtacaacgcctacaga
aaagcagcatctgtgatagcaaagtaccctcacaaaataaagagtggagcagaagctaag
aaattgcctggagtaggaacaaaaattgctgaaaagattgatgagtttttagcaactgga
aaattgcggaaactagaaaagattcggcaggatgatacaagttcatctatcaattttctg
actcgagttactggcattggtccctctgctgcaaggaagtttgttgatgaagggattaaa
acattagaagatctccgaaaaaatgaagaaaaattgaaccatcatcagcgtattgggcta
aaatatttcgaagactttgagaaaagaattcctcgagaagagatgttacaaatgcaagat
attgtactaaatgaagttaataaagtggattctgaatacattgctacagtctgtggcagt
tttagaagaggtgcagaatcgagtggtgatatggatgttctcttgacccacccaagcttt
acctctgagtcaaccaaacagccgaaactattacatcgtgttgtggagcagttacaaaag
gtccattttattactgataccctgtcaaagggtgaaacgaagttcatgggtgtttgccag
cttcctagtaaaagtgatggaacagaatatccacacaggagaattgatatcaggttaata
cccaaggatcagtattactgtggagttctctatttcactgggagtgatattttcaacaag
aacatgagagcccatgccctagaaaagggcttcacaatcaacgaatacacaattcgtcct
ttgggagtcactggcgttgctggggaacccctgccagtggaaagtgaaaaagacattttt
gactacatccagtggaaataccgagaacccaaggatcgaagtgaatga

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