Suncus etruscus (white-toothed pygmy shrew): 126006966
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Entry
126006966 CDS
T09902
Name
(RefSeq) C-type lectin domain family 6 member A-like
KO
K17514
C-type lectin domain family 6 member A
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
126006966
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
setr04054
]
126006966
04091 Lectins [BR:
setr04091
]
126006966
Pattern recognition receptors [BR:
setr04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
126006966
Lectins [BR:
setr04091
]
C-Type lectins
Asialoglycoprotein and DC receptors
126006966
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
DUF6161
Comm
Motif
Other DBs
NCBI-GeneID:
126006966
NCBI-ProteinID:
XP_049628458
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All DBs
Position
4:complement(15539138..15616235)
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AA seq
371 aa
AA seq
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MLVLNAYAQGAHSSLWWQRGLSARTAVAPAARAVSRELAVGITERKANPGQPFRCGCQRE
WPGRGSALFQLQTNLRLEEAIIVILLVHSHDLLDFSPGSQLDRHLSFRDKNVFVCSDFKR
HCKLFEVPVRVLSEDSRLSLLSMTTEITYAEVRFKNEQPKSLGNPSGAPAGKASCWFQTR
LWFVAVVCIVLISTCFIVSCVVFYEFTYGKTNKRLSQLHTHSSLTCFSEETIETGKTWGC
CPTNWKSFGSSCYFISEEFNFWAKSEQICVGMGAHLMVINTKKEQDFIVKHLNETYEYFL
GLSDPQGNDNWQWIDKTPYQENFRFWHKNEPNFSGEECGSIVFWKDEGWGWNDVFCFNNL
YSICEMNKLYL
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtgctcaacgcctatgctcaaggagctcatagctccctctggtggcagcgaggg
ctcagtgcccggacggctgtggcaccagcggccagagcagtcagtagagaattagcagta
ggaatcacggagagaaaagcaaaccccggccagcccttcaggtgtggctgccaacgggag
tggccaggaagaggatctgctctcttccagcttcagacaaatcttagactggaggaggct
atcatcgtcatcctcctcgtccactcccacgaccttcttgacttctctcccggaagtcag
ctggacaggcacctctcctttcgtgataagaatgtctttgtctgctctgactttaaaagg
cactgtaagttgtttgaagtgccagtgagagtcttgtctgaagacagtagattatctctt
ctcagcatgactacagagatcacttatgctgaagtgagattcaaaaatgaacaacctaag
tccttgggcaacccatcaggggctcctgcagggaaagcatcatgctggttccaaacaagg
ctctggtttgtggctgtggtttgcattgtcctgatcagtacttgtttcattgtgagctgt
gtggtgttttacgaatttacatatgggaaaactaacaagaggctctctcaactacataca
cattccagtctaacctgcttcagtgaggagaccattgaaacaggaaagacctggggatgt
tgtccgactaactggaaatcatttggttccagttgctacttcatttctgaggaatttaat
ttttgggctaagagtgagcagatatgtgttggaatgggggctcatctcatggtgatcaat
acgaaaaaggaacaggattttattgtcaagcatctgaatgaaacatatgaatattttctg
gggctctcagatccccaaggaaatgataattggcaatggattgacaagactccttaccag
gaaaatttcaggttttggcacaaaaatgagcctaatttttctggcgaagagtgtggttca
atagttttctggaaagatgaaggatggggctggaatgatgttttctgtttcaacaatctg
tattcaatatgtgagatgaataaactttacttatga
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