Suncus etruscus (white-toothed pygmy shrew): 126007001
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Entry
126007001 CDS
T09902
Symbol
FBXO42
Name
(RefSeq) LOW QUALITY PROTEIN: F-box only protein 42
KO
K10317
F-box protein 42
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
126007001 (FBXO42)
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
126007001 (FBXO42)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_4
Kelch_5
Kelch_1
Kelch_6
Kelch_2
NANM
F-box-like
F-box
F-box_5
Motif
Other DBs
NCBI-GeneID:
126007001
NCBI-ProteinID:
XP_049628488
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Position
4:21223309..21279862
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AA seq
716 aa
AA seq
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MASSSDSEDDSFMAVDQEETVLEGTMEQDDEPHPVLEVDETRHNRSMSELPEEVLEYILS
FLSPYQEHKTAALVCKQWYRLIKGVAHQCYHGFIKAVQEGNIQWESRTYPYPGTPITQRF
SHSACYYDANQSMYVFGGCTQSSCNAAFNDLWRLDLNSKEWIRPLASGSYPSPKAGATLV
VYKDLLVLFGGWTRPXPYPLHQPERFFDEIHTYSPSKNWWNCIVTTHGPPPMAGHSSCVI
DDKMIGFGGSYAPKSNDVWVLDLEQWAWSKPNISGPCPHPRGGQSQIVIDDATILILGGL
CGGPNALFKDAWLLHMHSGPWAWQPLKVENEDHGAPELWCHPACRVGQCVVVFSQAPSGR
APLSPSLNSRPSPISATPPALVPETREYRSQSPVRSMDEAPCVNGRWGTLRPRAQRQTPS
SSREGSLSPARGDGSPVLNGGSLSPGTAAVGGSSLDSPVQAISPSTPSATEGYDLKMGLS
LAPRRGSLPDQKDLRLGSIDLNWDAKPTSSSNHTDGVDSRTVGGSVRHPPEQTNGVHTPT
SRGSALAGAVSPGALRRSLEAIKSMSSKGPSASAALSPPLGSSPGXPGSQNVSAGETVPV
PRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPLYQSMNCKPMQMYVLDIKDXKEKGRVK
WKVFNSSSVVGPPETSLHTVVQGRGELIIFGGLMDKKQNVKYYPKTNALYFVRAKR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggccagctcctcagacagtgaagatgacagttttatggctgtggaccaagaagaaact
gtgctggaagggacaatggagcaagatgacgagccccatccagtattagaggttgatgag
accagacataataggtccatgtctgagctgcctgaagaggtcttagagtatatactgtct
tttctttcaccatatcaagaacacaaaactgcagctcttgtctgcaaacagtggtatcga
cttatcaaaggtgtagcccaccagtgttaccatggtttcataaaagctgtacaggaagga
aatattcagtgggagagtcggacttacccctatcctggaaccccgatcactcagcggttt
tcacacagtgcatgctattatgatgctaatcagtctatgtatgtgtttggaggctgtact
cagagtagctgcaatgctgccttcaatgatctttggagactagacctaaatagcaaagag
tggattcgacctttggcttcagggtcctatccttcccccaaagctggagcgactctggtt
gtctacaaagatctgctggtgctgtttggtggctggacgcggccanagccttatcccctg
caccaaccagagagattctttgatgaaatacatacttactcgccctcgaaaaactggtgg
aactgtattgtgaccacacacgggccacctcccatggctggccattcctcctgtgtgata
gatgataaaatgatcggctttggaggctcctatgccccaaagagtaatgatgtctgggtt
cttgaccttgagcagtgggcgtggtccaagccgaatatttccggcccctgtcctcatcct
cgaggtggccagtcgcagattgttatagatgatgcaactatcctaatccttggagggttg
tgtggcggacccaatgctctattcaaggatgcttggttgttgcacatgcactcgggcccc
tgggcctggcagcctctcaaggtagaaaatgaagatcatggggctccggaactctggtgc
catccagcttgtcgggtgggacagtgtgtggtggtcttcagccaggctcctagtgggaga
gctccactcagccctagtttgaactcgcgcccatcgcccatcagtgccactcctccagcc
ctggttccggaaacccgagagtaccgctctcagtctccagtaaggagtatggatgaagca
ccctgtgttaatggccgctggggaacactgaggcccagagctcagagacagaccccctca
agttcccgggaagggagcctttccccggccagaggagacggctcccccgtcctcaatggt
gggagtttgtctccaggaactgcagcggtaggcggctcttccctggacagtcctgtgcag
gccatctctcctagcactccatctgccactgaaggatatgatctaaaaatgggcctttct
ttggccccccgacgtggatccctaccagatcagaaagacctgcgattgggatcaatagat
ctgaattgggatgcgaaacccacttccagtagcaatcacacggatggcgtggacagcagg
acagttgggggcagcgtgaggcaccctcctgaacagacaaatggtgtgcatacccccacc
tcacgtggcagcgcccttgcaggtgctgtctccccaggagccttgcgtcggagcctggaa
gccattaagtcaatgtcctccaaaggcccttcggcctctgcagctctgagccctccactg
gggtcttctccaggcntccccggaagccagaacgtgagtgcaggagagactgtgcccgtt
ccccgcccagggcctgcccaaggagatggacattctttacctcccattgcccgccgcctg
ggccaccaccctccgcagtctctgaatgttggtaagcccttgtaccagagtatgaactgc
aagcccatgcagatgtacgtgctggacattaaagacnacaaagagaaggggagggtcaaa
tggaaagtatttaatagcagttctgtggttggaccgcccgaaaccagcctgcacacagtg
gtacaaggcaggggggagctcatcatcttcggaggactcatggacaagaagcagaatgtg
aagtactatccaaaaacaaacgccttgtactttgtgcgagcaaagagataa
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