Suncus etruscus (white-toothed pygmy shrew): 126007053
Help
Entry
126007053 CDS
T09902
Symbol
ABCA4
Name
(RefSeq) LOW QUALITY PROTEIN: retinal-specific phospholipid-transporting ATPase ABCA4
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
126007053 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
setr02000
]
126007053 (ABCA4)
Transporters [BR:
setr02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
126007053 (ABCA4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
ACT_13
AAA_15
AAA_23
AAA_22
AAA_29
Motif
Other DBs
NCBI-GeneID:
126007053
NCBI-ProteinID:
XP_049628522
LinkDB
All DBs
Position
4:complement(46635075..46803892)
Genome browser
AA seq
2257 aa
AA seq
DB search
MGYLRQIQLLLWKNWTVRKRQKIRFVVELVWPLSLFLVLIWLRNVNLPYSHHECHFPNKA
MPSAGLLPWLQGIICNMNNPCFQSTTPGESPGIVSNYNNSILARVYRDFQELLMDAPESQ
HLGQVWSELCALSQLMKTLRMHPERTAGRGIRIQDVLKHEETLTLFLKKNIGLSNSVVHL
LVSSQVRPEQFVHGVPDLALKDIACSEALLERFLIFSQRHGARMVREALCPLSQGTLQWV
EDSLYANIDFFNLVHVFSTFLDRGSQGIDMRSWGKVLSKMLPRIQEFIHRPSVQDLLWVS
RSFGQTGRPDTITQLMASLSALLCGYPEGGGSRVFSFNWYEDNNYKAFLGIDSSRKDPFE
TSNRRGMTFCHALIQTLESNPLTKIAWRAAKPLLMGKILYTPDSPAARKILKNANSTFEE
LDRFRKLAKAWEEVGPEIWYFFDKSTQMTMIRDILANPTVKDFLNRHFGEEGLTVEMALD
FLYNGPRERQVDSMDSFNWRDVFNITDHTLRLVNQYLECLILDKFESYDDEIQLTQRALS
LLEENRLWAGVVFPDMYPWTSSVPPHVKYKIRMDIDMVEKTNKIKDRFWDSGPRADPVED
FRYIWGGFAYLQDMIEQGITRSQAQAEVPIGIYLQQMPYPCFVDDSFMIILNRCFPIFMM
LAWIYSVSMTVKSIVLEKELRLKETLKHQGVSNAVIWCTWFLDSFSIMSMSIFLLSILIM
HGRILHYSNPLILFLFLLAFSIATIMQCFLLSTFFSKASLAAACSGLIYLTLYLPHILCF
AWQDRMTFDLKMAMSLLSPVAFGFGTQYLVRFEEQGLGLQWDNIGTSPMEGDGFNFLLCM
KMLLLDAILYGLLAWYLDQVFPGDYGTPLPWYFLLQESYWLGSEGCSTREERALEKTEPL
TEEMEDPEAPEGVKGSFFEHELPGLVPGVCVKNLVKIFEPNGRPAVDHLNITFYESQITA
LLGHNGAGKTTTLSILTGLLPPTLGTVLIGGKDIESNLDEIRQSLGLCPQHNILFHHLTV
AEHLLFYAQLNGKSTGKAKLEMETMLGDLGLHYKRNEEAQDLSGGMQRKLSVAIAFMGDA
KVVVLDEPTAGVDPYSRRSIWNLLLKYRKGRTIIMSTHHMDEADLLGDRIAIISQGKLYC
SGTPLFLKSCFGTGFYLTLVRRMKTVQGQRRGCQGAHVCTSPSCSGACPACPDDRSLEQV
LDGDVNELTDMVHHHVPEAKLVECIGQELVFLLPNKNFKQRAYASLFRELEETLADLGLS
SFGISDTPLEEIFLKVTEDSDSGLLLAGYTQHTREDVNFRCPTVGWTEKARHTSQVSNNC
SVEPAPHPKDQTSGEQVEHSRFNSGTWLVLQQVQALLVKRFHHSVRSHQDFLAQIVLPAT
FVCLALMLSIIVPPFGEYPALTLHPWMYGQQYTFISMDQPDNEQLLVLADVLLNKPGFDN
RCLKEELLLXNTCGNATPWQTPTVAPSVIHLLQRQDWTVDDPSHSCKCGTREKLTMLAEC
PPGAGGLPPPQRTQSSTEILQDLTNRNVSDFLVKTYPALIRSSLKSKFWVNEQRYGGISI
GGKLPVLPLTADALVGFLSGLGQLMNVSGGPITREASKEMSAFLKHLETEDNIKVWFNNK
GWHALVSFLNVAHNAILRASLLKDKDPEKHGITVINHPLNLTKEQLSEITVLTTSVDAMV
AICVILAMSFVPASFVLYLIQERVNKAKHLQFLSGVSPTTYWVTNFLWDMVNYSVSAMLV
VGIFMGFQKQAYISPHHLPALVALLMLYGWAIIPMMYPASFLFDVPSTAYVALSCANLFI
GVNSSAITFILELFENNPTLLRFNAILKRLLLIFPHFCLGRGLIDLALSQAVTDVYARFG
EAHSSNPFQWDLLGKHLAALALEGVLYFLLTLLIQNHFFLTPWIAEPTKEPIVDEDDDVA
EERQRILSGGNKMALLRLNELTKVYSGSSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTF
KMLTGDTTVTSGDATIVGKSILTNTSDVRQNMGYCPQFDVIDDLLTGREHLYLYARLRGV
PAEEIESVAQWSIKSLGLSFYADRLAGTYSHGNKRKLSTAIALVGCPLLVLLDEPTTGMD
PQARRMLWHTIMSIIREGRAVVLTSHSMEECEALCTRLAIMVRGTFQCLGTIQHLKYKFG
DGYIVTMKIRSPRDSLQPDLNPVEQFFQGNFPGSVQRERHHNMLQFQVSSSSLARVFQLL
LSHKDSLLIEEYSVSQTTLDQVFVNFAKQQNETPFLP
NT seq
6774 nt
NT seq
+upstream
nt +downstream
nt
atgggctacttgagacagatccagcttctgctctggaaaaactggactgtgaggaaaagg
caaaagattcgttttgtggtggaacttgtgtggcccttatcattattcctggtcttgatc
tggttaagaaatgtcaatctaccctacagccaccatgaatgccattttcccaacaaagcc
atgccttctgcaggacttttgccatggctccagggaattatctgcaacatgaataatcct
tgttttcaaagtaccacccctggagaatctcctggaattgtgtcaaactataacaactcc
attctggcaagggtatatcgagattttcaagagcttcttatggatgccccagagagccag
caccttggccaagtctggtcagagctgtgtgccttgtcccagctgatgaagacccttagg
atgcacccggagagaacggcaggaagaggaatacgcattcaggatgtccttaaacatgag
gaaacacttacactatttctgaagaaaaacattggcctgtctaactcggttgtccacctt
ctggtcagctcccaagtccgtcctgagcagtttgttcatggagtcccagacctggcactc
aaggacattgcctgcagcgaggccctcctagaacgcttcctcatctttagccagcgccat
ggagcacggatggtgcgagaagccctgtgcccactctctcagggaaccctgcagtgggtg
gaagattcgctgtatgctaatatagacttcttcaatctcgtccatgtgttttccactttc
ctagacagaggttctcaaggtattgatatgagatcctggggaaaagtattatctaaaatg
ttaccaagaattcaagagttcatccatcggccgagtgtgcaggatttgttatgggtgagc
aggtcttttggacagactgggagacctgacacaataacacagctgatggccagtttgtct
gcccttttgtgtggctacccagagggaggaggctcacgagtgttctcctttaattggtat
gaagacaacaactataaggccttcctgggtattgactccagccggaaagatccctttgag
acttctaacagaagaggaatgaccttttgtcatgcgttgatccagaccctggagtcaaac
cctctcaccaaaatagcctggagggccgcaaagcctttgctgatgggaaaaatcctctac
actccagattctccagcagctcgcaagatactaaagaatgctaactcaacttttgaggag
ttggaccgctttaggaagttggccaaagcctgggaagaagtaggacccgagatctggtac
ttctttgacaagagcacacagatgaccatgatcagagacattttggcgaacccaacagtc
aaagactttttaaataggcattttggtgaagaaggtttgactgtggagatggcactagac
ttcctgtataatggtcctcgggagagacaggtggacagcatggacagctttaactggagg
gatgtgttcaacatcactgatcatactctgcgtctggtgaatcaatacctggagtgcttg
atcctggataaatttgaaagctacgatgatgaaattcagctcacacagagagccctatct
ctgctggaggaaaacaggctctgggcaggagtggtattccctgacatgtatccctggacc
agctccgtacctcctcatgtgaagtacaagatacggatggacatagacatggtggagaaa
accaataagatcaaagacaggttctgggactcgggtcccagagcagatccagtggaagac
ttccgatacatctggggaggatttgcctacctgcaggacatgattgaacaaggaatcaca
aggagtcaggcacaggctgaggttcctattggcatctatctacagcagatgccttacccc
tgctttgtggacgactcttttatgatcatcctgaaccgctgtttccctatcttcatgatg
ctggcttggatctactctgtctccatgactgtaaaaagtattgtcttagagaaggagtta
agactaaaggagaccttgaaacatcagggggtttccaatgcagtgatttggtgtacctgg
tttctggacagcttctccattatgtcaatgagcatcttcctcttgtctatattgatcatg
catgggcgaattctacactatagcaatccactcatcctcttcctgttcctgttggctttc
tccatcgcgaccatcatgcagtgcttcctgctcagcaccttcttctccaaggccagtttg
gctgcagcctgcagtggcctcatctacttgaccctctacctgccacatattctctgcttc
gcctggcaagaccgcatgacctttgacctgaagatggctatgagcctgttgtctccagta
gcatttggatttggcactcagtacctggttcgttttgaggagcaaggtctgggtctgcag
tgggacaatattggaaccagtcccatggaaggggatggatttaattttctcttgtgcatg
aagatgctgctgcttgatgctatactgtatggcctgcttgcctggtacctcgaccaggtg
tttccaggagactatggaaccccacttccttggtatttccttctacaagaatcctattgg
cttggcagtgaaggatgttcaaccagagaagagagggctctggaaaagacagagcccctg
acagaggaaatggaagatccagaagccccagaaggagttaaaggctccttcttcgaacat
gagcttccaggcttagtgcctggcgtctgtgtgaagaatctcgtcaagatttttgaaccc
aatggcaggccagccgtggatcacctcaacattaccttctacgagagccagatcactgca
ctccttggtcacaatggagcggggaaaactaccaccttgtccatcctgacgggtctgttg
ccaccaacactggggactgtgcttattgggggaaaggacattgagagcaacctggatgaa
attcggcagagccttggcctatgtccacaacacaacatccttttccaccacctcacagtg
gctgagcacctcctcttctacgcacaactgaacgggaagtccacaggaaaagccaagcta
gagatggaaaccatgttgggggacctgggccttcactacaagaggaatgaagaagcacag
gatctctcaggtggcatgcagagaaagttgtccgtggctatagcttttatgggtgatgca
aaggtggtggttctggatgaacccactgctggggtggacccctactccagacgttctatc
tggaacttgctcctgaagtatcgcaaaggcagaaccatcatcatgtccactcaccacatg
gatgaggctgaccttctcggagatcgcattgccattatttcccaaggaaagctctactgc
tcagggaccccactcttcctgaagagctgctttggcactggcttctacttgaccttggtg
cgcagaatgaaaaccgtgcagggccaaaggagaggctgccagggagcccacgtctgcaca
tctcccagctgctccggagcatgtccagcctgcccagatgacaggagtctggaacaagtt
ctggatggggatgtgaatgagctgacggatatggttcaccaccacgttccagaggccaag
ctagtagaatgcattggccaagaacttgtcttccttcttccaaataagaacttcaagcag
agagcctatgccagccttttcagagagctggaggagacactcgctgacctggggctcagc
agttttgggatttctgacactcctctggaagagatttttctgaaagtcacagaggattct
gactcaggacttctacttgctggctacactcagcatacaagagaggatgtcaacttccgc
tgtcctactgtgggttggacagagaaggccagacatacatcccaggtctccaacaactgc
tctgtggaaccagctcctcaccccaaggaccagacttctggggagcaggtagagcactcc
cggttcaactcaggaacatggctggtcctccagcaagtacaagcactgctggtcaagcga
ttccaccactcggtccgcagccaccaggacttcctggcccagattgtgctcccggccact
tttgtgtgtttggctttgatgctttccatcatcgtccctccttttggtgaatatcccgcg
ttgaccctccacccctggatgtatggacaacagtataccttcatcagcatggatcagcca
gacaatgagcagctcttagtcctcgcagatgtgctcctgaacaagccaggctttgacaac
cgctgcctgaaggaagagttgcttctgtgaaacacctgtggcaatgcaaccccctggcaa
acgcccactgtggcccctagtgtcatccatctgctgcagaggcaggactggacggtagat
gacccttcacactcctgcaaatgcggcacccgtgagaagctcactatgctcgctgagtgc
cccccgggggcaggaggactcccaccccctcaaagaacacagagtagcacagagattctg
caagacctcaccaacaggaacgtctccgacttcttggtcaaaacctatcccgcactgata
agaagcagcctaaagagcaaattctgggtcaatgaacaaagatacggaggaatttccatt
ggagggaagctcccagttcttcccctcactgcggatgcccttgttggatttctcagcggc
cttgggcagctcatgaatgtgagcgggggccctatcaccagagaggcctctaaagaaatg
tctgcctttctcaaacatctggaaactgaagacaacattaaggtatggtttaacaacaaa
ggctggcatgccttggtcagcttcctcaacgtggcccacaatgccatcttacgggccagc
ctgcttaaggacaaggaccctgagaagcatggcatcacagttataaatcatcccttgaat
ctgaccaaggagcagctctcagagattacagtgctcactacctcggtggatgcaatggtt
gccatctgtgtgattctcgctatgtccttcgtcccagccagctttgtcctctatttgatc
caggagagggtgaataaagccaaacacttgcagtttctcagtggagtgagcccaaccacc
tactgggtgaccaactttctctgggacatggtgaactactctgtgagtgccatgctggtg
gttggcatcttcatgggcttccagaagcaagcctacatttccccacaccatctccctgcc
cttgtggccctgctcatgctctacggatgggctatcatccccatgatgtacccagcatcc
ttcctgtttgatgtccccagcacagcctatgtggccttgtcctgtgctaatctcttcatc
ggagtcaatagcagtgccatcacattcatcttggaattatttgagaataacccaacgctg
ctcaggttcaatgccatactgaagaggttactcctaatcttcccccatttctgcctgggc
cggggcctcatcgacctggcgctgagtcaggcagtgactgacgtctatgcccggttcggc
gaggcacactcttcgaatccattccaatgggacctgctggggaagcacctggctgccctg
gctctagaaggggtgctgtacttccttctcaccctcctcatccagaaccacttctttctt
actccatggatagctgagcccactaaggagcccattgtagatgaagatgatgatgtggct
gaagaaagacaaagaattttaagtggagggaataaaatggctctcttaaggctgaatgaa
ttaaccaaggtatattctggcagttccagtccagcagtggacaggctgtgtgtgggggtc
cgccctggagagtgctttggcctcttgggagtgaatggagctggaaaaacaaccactttc
aagatgctcaccggagacaccacagtcacctctggtgatgccaccatagtaggcaagagc
attttaaccaatacttctgatgttcgtcaaaatatgggctactgtcctcagtttgatgtc
atcgatgaccttctcacagggagagagcacctttacctctatgcacgacttcgaggggta
ccagcagaggaaattgagagtgttgcacaatggagtattaagagtctgggcctgtctttc
tatgcggaccgcctggctggtacttatagtcacggcaacaagcggaaactctccacagcc
atcgcactggtgggctgcccactactggtgctactggatgagcccactacaggcatggac
ccgcaggcacgccgcatgctatggcacaccatcatgagcatcatcagagaaggaagagct
gtggtcctcacatcccacagcatggaagaatgtgaggccctgtgcacacggctggccatc
atggtgagggggacctttcagtgtctgggaaccatacagcatctcaagtacaagtttgga
gatggctacatcgttacaatgaaaatcagatccccaagggacagcctccaaccagacctg
aacccagtggagcagtttttccaggggaacttcccgggcagcgtgcaaagggagcgacac
cacaacatgctgcagttccaggtctcctcctcctccctggctagggtcttccagttgctc
ctctctcacaaggacagtctgctcatcgaggagtactctgtctcgcagaccacactggac
caggtatttgtgaactttgctaaacaacagaatgaaactccctttttaccttga
DBGET
integrated database retrieval system
