Suncus etruscus (white-toothed pygmy shrew): 126007236
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Entry
126007236 CDS
T09902
Symbol
WRN
Name
(RefSeq) LOW QUALITY PROTEIN: bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
setr03032
]
126007236 (WRN)
03400 DNA repair and recombination proteins [BR:
setr03400
]
126007236 (WRN)
Enzymes [BR:
setr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
126007236 (WRN)
DNA replication proteins [BR:
setr03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
126007236 (WRN)
DNA repair and recombination proteins [BR:
setr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
126007236 (WRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DEAD
HTH_40
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
SAM_GIDA_C
Motif
Other DBs
NCBI-GeneID:
126007236
NCBI-ProteinID:
XP_049628658
LinkDB
All DBs
Position
4:138390160..138518647
Genome browser
AA seq
1356 aa
AA seq
DB search
MEMVVGFDIEWPPVXTVKGKLSRVALIQLCVSESKCYLFHIPSVSVFPQGLKMLLENEAI
KKTGVGIEGDQWKLLRDFDVKLKSFVELTDVANEKLQCTETWSLNSFLRHLFGKQLLKNK
AIRCSNWNDFPLSETQKLYAATDAYAGLIIYRKLEILGDAVTQMFAINKEEELSSHNVKK
QLTSISQEMLELAEHLPDTLSKLEDPKRISLLLKDISTNLYSLKKLLLDSCAINPELQHR
SDSDFLEDSIAGGLHQKQIREHKIVNEFEVEDEKSLENLTEFNIENVFGNDLKQGDNKLE
DQLRDKSKTNTERTCLMSLDVTDSELQMLEQQVPEKISSDIICTSPELLSSKDNEDDTSY
IIESDEELEIEMLKSLENINSDTVDSVYSKCVEMENDLDLHSEDGDDEEESIEEEKDDID
PSLPEPSTDQITCLKTYFGHSSFKPVQWKVIHSVLKERRDNVVVMATGYGKSLCFQYPPV
YVGGIGLVISPLISLMEDQVLQLEMSSIPACLLGSAQPKNVLSDVKSGKYRIVYLTPEFC
ISHLGLLQELEAHIGITLIAVDEAHCISEWGHDFRNSYRSLNSLRRILPLVPIVALTATA
TSSVREDIIHSLKLKDPEITLTGFDRPNLYLEVGRKTGNICQDLKRFLIKKTSSTWEFEG
PAIIYCPSRKMTEQVAAELRPLQLACETYHAGMSIKLRKELHHKFMRDEIQCVIATVAFG
MGINKADIRKVIHYGAPKEMESYYQEIGRAGRDGLPSSCHLLWAPADITLNRHRLNEIQN
EKFRLYKLKMMAKMKKYLHSSNCRRQIILSHFEDKQLRKASLGIMGTEKCCDNCKSRLNS
CLAIDDPVDTLQDFGSQAFQLLSAVTILGEKFGIGVPILFLRGSYSQRLEDKYRRHSFFG
IGKNHTESWWKAFSYQLVIEGFLVETSGYNKFAKIYKLTEKGRNWLANANTESDRKLILQ
TNEELCSSEHLPSSKTISSGNQQYFSRQELIELSAERKSNLEKMYSYKTFDKMSSGNNSP
KKSIMLQSPEKFSEPVISAQEQEIQTTLYIRLVEARQKHASKMNVPPAILATNKILLDMA
KMRPTTVENVKRIDGVSEGKSTMLAPLLDVIKNFCQINHVQADLFSSTEPQEKLKNILRV
EKEACLLSQSVAITYSLFQKEKMSLERVAENRILPLPTVGMHLSQAMKAGYPLDMERAGL
TPEVQKIIADVIRNPPINSDINKMKLIRTLVPEDIDTYLIHMAIEILNKDSKYRLLCQPS
YDSNKKRCYSDSEESCSSSKRNKEEDTNIKPFLLSCDLKALDDRDDSLCSSSDVLMPSQL
HCLFAMRNPDPSLVIFSCSKLVVDRYESKDTDDSSR
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atggagatggtggtaggatttgacattgaatggccaccagtataaaccgtaaagggaaaa
ctgagcagagttgcactaattcagttgtgtgtgtcagagagcaaatgttacttgtttcat
attccttctgtatctgtttttcctcagggcttaaaaatgttgcttgaaaatgaagcaatt
aaaaagacaggtgtaggtattgaaggagatcagtggaaacttctgcgtgactttgatgtt
aaattaaagagttttgtggaactaacagatgttgccaatgaaaagttgcaatgtacagag
acctggagcctcaatagttttttaagacatctctttggtaaacagcttctgaaaaacaag
gctatccgctgtagcaactggaatgattttcctctcagcgaaacacagaaactgtatgca
gccactgatgcttatgctggtctcatcatttaccgaaaattagaaattttgggagatgct
gttacacaaatgtttgctataaataaagaggaggagctatcatctcacaatgtaaagaaa
cagttgacttccatttctcaggagatgttggagctggctgaacatcttcctgatacttta
agcaaattggaagacccaaagaggatttctttgctcttaaaggatatttctacaaattta
tattcactgaagaagttactattagattcttgtgccatcaatcctgaactacaacacaga
agtgactctgatttcctggaggattcaattgctggtggactacatcagaaacaaattaga
gaacataaaattgttaatgaatttgaagttgaagatgagaaatcacttgaaaatttaact
gagtttaatatagagaatgtatttggaaatgatttgaaacaaggagataataagcttgaa
gatcaactaagagacaagtcaaaaactaatacagagagaacttgtttgatgtcattagat
gttacagattctgaactccaaatgttggaacagcaggttcctgaaaaaatttcaagtgat
attatttgcacatctcctgagcttttgtcttccaaggataatgaagatgatacatcttat
ataattgaaagtgatgaagaattagaaatagagatgcttaagtctttagaaaacataaat
agtgacacagtagattcagtttattcaaagtgtgtagaaatggaaaatgatctggatctt
cattctgaagatggggatgatgaggaagaatccattgaagaggaaaaagatgatatagac
ccttcattaccagaacctagtacagatcaaattacttgtctcaagacctactttggccat
tccagttttaagccggttcagtggaaagtaattcattcggtactgaaagaaagaagagat
aatgttgttgtcatggcaactggatatggaaagagtttgtgcttccagtatccccctgtt
tatgtaggggggattggccttgtcatctctcctcttatttctttgatggaagaccaagtg
ctccagcttgaaatgtctagtattccagcttgtttacttggatcagcacagccaaaaaat
gttctctcagatgttaaatcaggtaaatatcgaattgtatacctaacaccagaattctgt
attagtcacttgggcctactccaggaactcgaagctcatattggtatcactcttattgct
gtggatgaggcacactgtatttctgagtggggacatgattttagaaattcatatagatct
ctgaactccctaaggagaatacttccattggtgccaattgttgcccttactgctactgca
acttcttcagtccgggaagacattattcattctttaaagctgaaagatcctgagattacc
cttactggttttgatcgaccaaacttgtatttagaagttggacgaaaaactggaaatatc
tgtcaggatctgaagcgttttctgatcaaaaaaacaagttctacctgggaatttgaaggt
ccagctatcatctattgtccttccagaaaaatgacagaacaagttgcagctgaacttagg
ccactgcagttagcctgtgaaacataccatgcaggcatgagtattaagttaaggaaagag
ttgcatcataagttcatgagagatgaaattcagtgtgtcatagctactgtagcttttgga
atgggaattaataaagctgacattcgcaaagtcattcattacggtgctcctaaggaaatg
gaatcatattaccaggagattggcagagctggccgagatggacttccaagttcttgccac
ttactctgggctccagcagatattactttaaatagacaccgccttaatgagatacaaaat
gaaaagtttcgattatacaaattaaagatgatggcaaagatgaaaaagtatcttcattcc
agcaactgtaggagacaaatcatcttatctcattttgaagataaacaactacgaaaagcc
tccttgggtattatgggaactgaaaaatgctgtgataattgcaagtccagattgaattct
tgcttagcaattgatgacccagtggacactctacaggactttggttcacaagcatttcaa
ttactatctgcagtgaccatcttaggagaaaagtttggaattggggttccaattttgttt
cttcgaggatcttattcccagcgtcttgaagacaaatatcgcaggcacagtttcttcggc
attggcaagaatcacacagagagttggtggaaggctttttcttatcagcttgttattgaa
ggattcttggtagaaacttctgggtacaacaaatttgctaagatttacaaacttacagaa
aagggtagaaattggcttgctaatgccaatacagagtctgatcggaagcttatccttcaa
actaatgaagaattatgttcatcagagcatctaccaagttctaaaactatatcttcaggc
aatcaacaatatttctctagacaagaattaattgaattaagtgcagagaggaagtctaac
ttggagaagatgtattcttacaaaacatttgataagatgtcttctggaaataatagtcct
aaaaaaagtatcatgctgcagtcaccagaaaaattctcagaacctgtgatttcagctcaa
gaacaggagattcaaacaacattatatatcaggttggtagaagccaggcagaaacatgcc
agtaaaatgaatgttccaccagccattcttgcaacaaataagatattgctggacatggcc
aaaatgagacctactacagttgaaaacgtgaaaaggattgatggtgtttctgaaggcaaa
tctactatgttggctcctctgttggacgttatcaaaaatttctgccaaataaatcatgtc
caggcagacctattttcaagtacagaacctcaggaaaaactgaagaacatcttgagggta
gaaaaggaagcatgtttactttcacagtctgtggctattacatattctttattccaaaaa
gagaagatgtctttggagcgtgtagctgagaacaggattttgcctctcccaacagttggc
atgcacttatcccaagcgatgaaagcaggctaccctctagatatggagagagcaggcctg
actccagaggttcagaagattattgctgatgttatccgaaaccctcccatcaactcagat
ataaataaaatgaaactaattagaacgttagttcctgaagacattgacacataccttatt
catatggcaattgagattctgaataaagattctaagtacagattgttatgccaaccttcg
tatgattccaacaaaaagagatgttactctgactctgaagagagctgttcaagttctaag
agaaacaaggaagaagacactaatatcaagcctttcctcctgtcctgtgatctcaaagct
ttggatgatagggatgattctttatgttctagtagtgatgtattgatgccatcacagtta
cattgtctatttgccatgaggaaccctgacccatccttggtgattttttcctgcagtaaa
ctagtggtagatcgctatgagtccaaagacactgatgattcctcaagataa
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integrated database retrieval system
