Suncus etruscus (white-toothed pygmy shrew): 126008620
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Entry
126008620 CDS
T09902
Symbol
ITGA4
Name
(RefSeq) integrin alpha-4
KO
K06483
integrin alpha 4
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04151
PI3K-Akt signaling pathway
setr04510
Focal adhesion
setr04512
ECM-receptor interaction
setr04514
Cell adhesion molecules
setr04640
Hematopoietic cell lineage
setr04670
Leukocyte transendothelial migration
setr04672
Intestinal immune network for IgA production
setr04810
Regulation of actin cytoskeleton
setr04820
Cytoskeleton in muscle cells
setr05135
Yersinia infection
setr05140
Leishmaniasis
setr05165
Human papillomavirus infection
setr05410
Hypertrophic cardiomyopathy
setr05412
Arrhythmogenic right ventricular cardiomyopathy
setr05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
126008620 (ITGA4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126008620 (ITGA4)
04514 Cell adhesion molecules
126008620 (ITGA4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
126008620 (ITGA4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
126008620 (ITGA4)
04810 Regulation of actin cytoskeleton
126008620 (ITGA4)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
126008620 (ITGA4)
04670 Leukocyte transendothelial migration
126008620 (ITGA4)
04672 Intestinal immune network for IgA production
126008620 (ITGA4)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
126008620 (ITGA4)
09171 Infectious disease: bacterial
05135 Yersinia infection
126008620 (ITGA4)
09174 Infectious disease: parasitic
05140 Leishmaniasis
126008620 (ITGA4)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
126008620 (ITGA4)
05412 Arrhythmogenic right ventricular cardiomyopathy
126008620 (ITGA4)
05414 Dilated cardiomyopathy
126008620 (ITGA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
setr04147
]
126008620 (ITGA4)
04515 Cell adhesion molecules [BR:
setr04515
]
126008620 (ITGA4)
04090 CD molecules [BR:
setr04090
]
126008620 (ITGA4)
Exosome [BR:
setr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
126008620 (ITGA4)
Exosomal proteins of other cancer cells
126008620 (ITGA4)
Cell adhesion molecules [BR:
setr04515
]
Integrins
Integrin alpha subunits
126008620 (ITGA4)
CD molecules [BR:
setr04090
]
Proteins
126008620 (ITGA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP
FG-GAP_3
Integrin_alpha
CATSPERG_C
FG-GAP_2
Motif
Other DBs
NCBI-GeneID:
126008620
NCBI-ProteinID:
XP_049628828
LinkDB
All DBs
Position
5:complement(84293770..84387090)
Genome browser
AA seq
1041 aa
AA seq
DB search
MAGEARRGPAPRRAAVPQAGMLLLLLLLWLCLGCVPIARTYNVDTENALLYQGPPDTLFG
YSVALHSHGAHRWLLVGAPRATWPSNASVDHPGAIYKCRIGRNPGQTCEQLQLGSPQGEP
CGKTCLEERDNQWLGVSLSRQPGENGSIVACGHRWKNIFYIKTENKLPSGICYAIPSDLR
AELSKRIAPCYQDYAKKFGENYASCQAGISSFYTKDSIVMGAPGSAYWTGSLFVYNIITN
KFMAFLDRRNQVKFGSYLGYSVAAGHFRSRHTTEVVGGAPQHEQIGKAYIFSIDAKELNI
IHEMKGKKLGSYFGAAVCAVDLNADGFSDLLVGAPMQSVVREEGRVYVYINSRSGAVMNE
MEIELVGSDKYAARFGESIANLGDIDNDGFEDVAIGAPQEDDLRGAVYIYNGREDGISST
FSQRIESIQISNSLSMFGQSISGQIDADNNGYVDIAVGAFRSNSAILLRTRPVVIVEASL
NHPESINRTNFDCVENGLPSVCMDLNLCFSYKGKEVPGYIVLFYNMSLDMNRKAETPARF
YFSSNGTSDVITGSIKVSSKRANCQTHQAFMRKDVRDILTPIQIEAAYHLGHHVLSKQST
DEFPPLQPILQQTKAKDKIEKTIHFARFCANENCSADLQVTAKIGFLKPHENKTYLAVGS
MKTLMLNVSLFNAGDDAYETTLHIQLPSGLYFIKILDLEEKQINCEVTDNSGIGKLVCTV
GYIYVDHLSKTDISFLLDASSLSRAEEDLNITMHASCENEGDVDSLKDNKASITLPLKYE
VMLGVHGFVNPTSFVYGSKEDETETCMEEKVNFTFHVINTGLGMVPNVSVEIMIPNSFMP
QNYVLFNILDVQSTTGECLYKNYERTCELEQQKGGMQILKDMYLFFSKTDKMLFHCMKVD
PFCLNILCNFGTMESGKEASVQIQLEGRPSLLEIDESSTLKFEIRATAFPEPNPKVIELN
KDENVALVLLEGVHHQRPKRNFTIMIVSISLLFGLILLFLISGAMWKVGFFKRQYKSILQ
EENKRDSWSYVNSKINDDEEH
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggccggggaagcaaggcgcgggccggcacctcgaagggctgcggtcccccaggctggg
atgctgctgctgctgctgctgctgtggctgtgtttgggttgtgtcccgatcgcgcgcacc
tacaacgtggacaccgagaacgcgctgctctaccaggggcccccggacaccctcttcggc
tactcggtggcgctgcacagccacggggcgcaccgctggctcctcgtgggcgcgcccagg
gccacttggccctccaatgcttccgtggaccatcccggggcgatttacaaatgcaggata
ggaaggaatccgggccagacctgtgagcagcttcaactgggtagccctcaaggagaacct
tgtggaaagacatgtttggaagaaagagacaatcagtggttgggagtttcgctttccaga
cagccaggagaaaatggatccattgtggcttgtggacatagatggaaaaatatattttat
ataaaaactgaaaataagcttcccagcggtatttgctatgcaataccttctgacttacga
gcagaactgagtaaaagaatagctccgtgttatcaagattatgcaaaaaaatttggagaa
aattatgcctcatgtcaagctggaatatctagtttttacacaaaggattcaattgtgatg
ggagctccgggatcagcttattggactggctctctttttgtctacaatataattacaaat
aaattcatggcatttttagacagaagaaatcaagtaaaatttggcagctatctaggatac
tcagtggcagctggtcactttcgaagtcggcacacaactgaagtagttggaggagccccc
caacatgaacaaattggcaaagcatacatattcagcattgatgcaaaagaactgaatatc
atacatgaaatgaaaggtaaaaagctcggctcttactttggagctgctgtctgtgcagtg
gacctcaatgcagatggcttttcggacctccttgttggagcccccatgcagagcgtcgta
agagaggaaggaagagtctatgtgtatatcaactctcgctcgggagcggtaatgaatgaa
atggaaatagagctcgttggcagtgacaaatatgctgcaagatttggggaatctattgct
aatcttggtgacattgataatgatggctttgaagatgttgctattggagcaccacaagaa
gatgacttgcggggtgctgtttacatttacaatggccgagaagatgggatctcatctacc
ttctcacagagaattgaaagcattcagatcagcaactctctaagtatgtttggacaatct
atatctggacaaattgatgcagataacaatggatatgtagatatagcagttggtgctttc
cgatctaattctgctattttgctaaggacaaggcctgtggtgattgttgaagcttcttta
aaccatcccgagtcaataaacagaaccaattttgactgtgttgaaaatggattaccatct
gtatgcatggatctaaatctatgtttctcatataagggcaaagaggtgccaggttatata
gttttattctataatatgagtctggatatgaaccgaaaggcggagaccccagccaggttt
tacttttcctccaatggaacttctgatgtgataacaggaagcataaaagtatcaagcaaa
agagctaactgtcaaacccatcaagcatttatgcggaaagatgtgcgggacatccttacc
ccaattcagatagaagctgcctaccacctcgggcatcatgtcctcagtaaacagagcaca
gacgaattcccaccactgcagccaattctgcagcagacaaaagcaaaagacaagattgaa
aaaacaatacactttgcaagattttgtgccaacgaaaattgttctgctgatttgcaggtt
actgcaaaaatcggatttttgaagccacatgaaaataaaacctaccttgctgttggaagt
atgaagactttaatgttgaatgtgtccttgtttaatgctggagatgatgcctatgaaaca
actctccatatccaactaccctcaggtctttatttcataaagattttagacctggaagag
aagcaaattaactgtgaagtaacagacaactctggcataggaaaacttgtctgcactgtt
ggttatatctatgtggatcatctctcaaaaacagatattagctttctcctggatgcaagc
tcgctcagcagagcagaagaagacctcaacatcactatgcatgcttcctgtgaaaatgaa
ggagacgtagacagtctcaaggacaacaaagcctcgataacgttaccactgaagtatgag
gtgatgctcggtgtacatgggtttgtaaacccaacttcatttgtgtatggatcaaaggaa
gatgaaactgaaacatgcatggaggaaaaagtaaacttcactttccatgtcatcaacact
ggtcttggcatggttccaaatgttagtgttgaaatcatgataccaaattcttttatgccc
caaaattatgtattgttcaacattttggatgtccagagtactactggagaatgcctttat
aagaactatgaaagaacctgtgaattagagcagcaaaaaggtggaatgcaaatcctgaaa
gacatgtacctattcttctcaaagactgataaaatgctctttcactgcatgaaagttgat
ccattttgtttaaatatcttatgcaattttgggacaatggaaagtggaaaagaagccagt
gttcaaattcagttggaaggccggccgtctcttttagaaatagatgaaagttcaacactc
aagtttgaaatcagagcgacagcttttccagagccaaatccaaaagtcattgaattgaac
aaggatgaaaatgtagcacttgttcttctggaaggagtacatcatcaaagacccaaaaga
aatttcactatcatgattgtctcaattagcctgctgtttggacttattttactcttcctt
atttcaggtgccatgtggaaggttggcttctttaaaagacagtataaatctatcttacaa
gaagaaaacaaaagagacagttggagttatgtgaacagtaaaatcaatgatgatgaagaa
cattaa
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