Suncus etruscus (white-toothed pygmy shrew): 126008644
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Entry
126008644 CDS
T09902
Symbol
COL14A1
Name
(RefSeq) collagen alpha-1(XIV) chain
KO
K08133
collagen type XIV alpha
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
126008644 (COL14A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
setr00535
]
126008644 (COL14A1)
Proteoglycans [BR:
setr00535
]
Extracellular matrix (ECM) proteoglycans
Others
126008644 (COL14A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
VWA_3
CBM_4_9
Motif
Other DBs
NCBI-GeneID:
126008644
NCBI-ProteinID:
XP_049628842
LinkDB
All DBs
Position
5:106053593..106329579
Genome browser
AA seq
2143 aa
AA seq
DB search
MGGSAEESARRPDKRSLLAPTPRERLTWTWDEPKGTPTGCGGPGSWEIRAWSGGRALGGS
ACPVHPLTNRDGGASATPRALPGGCPGRGVARAGLGGAAPGGGLGRGLRERGGGDLDLPF
LPTPAPEAPFPSPIGRRRDLTLLFSGLVGCEAGGERRRAEGGSRVPEPGVRSRASSKEDP
GGNERDFYSLRSNCFLWAPPTGPLPGLESGSAQVSANRFLCPGSALRGRKNGSWRACDLQ
TPCIAWASLRTTNYRCMQMVKRPLGCRGMVHVDALRMPRVQYTLQRMSGAGALRGSGAQM
QRKGRGPRFLRELFSEFGCSELRRVCREEGLVWRRVVSGSPSPLIKGNKVKIFQGRMQFW
LIPSLLTIAHLFTVVQSQVSPPTRLRYNVLSHDSLQISWKAPRGKFGGYKLLVTPTSGGK
TNHLNLQNTATKAIIQGLMPDQNYTVQLIAYNKDKESKPAQGQFRINDLEKRKDPKPKKV
VDKGNGSKPFSPEVKFFCETSAIADIVILVDGSWSIGRFNFRLVRLFLENLVTAFNVGSE
KTRIGLAQYSGDPRIEWHLNAFSTKDEVIEAVRNLPYKGGNTLTGLALNYIFENSFKPEA
GARTGVSKIGILITDGKSQDDIIPPSRNLRESGVELFAIGVKNADESELQEIASEPDSTH
VYNVAEFDLMHTVVESLTRTVCSRVEEQDKENKAAALTPTGPPTELIISEVTARSFMVNW
TYAPGKVQKYRVVYYPTRGGKPEEVVVDGSVSSTMLKGLMSLTEYQVAVFAIYAHTASEG
LRGSETTLALPMASNLQLYDVTENSMKATWNAVPGATGYLILYAPLTEDLAGDEKEVKVG
ETHTNVELSGLLPNTEYTVTIYAMFGEEASDPVSGQETTLPLSPPRNLRISNVGSNSARL
AWDPTSRKISGYRIVYNNEDGTEINEVEVDPITTFPLKSLTPLTEYTVAIFSIYEEGQSE
PLTGVFTTEEVPAQQYLEIDEVKIDSFRVTWHPLSPDEGQHKLMWIPVYGGKTEEVLLKE
DQDSHVIEGLDPGTEYEVSLLAVMDDGSENEVVTAVGTTLDSDWTESATTIEPTTSVTSV
FRTGIRNLVVDEETTSSLWVKWDISDSDVLQFRVTYLTAQGDPAEEVVGTVMVPGNENNL
LLPSLLPNTEYKVTVTPIYNDEEGVSVSAPGKTLSPSGPQNLRVSEEWYNRLRITWDPPA
SLVKGYRIIYKPISVAGPTLETFVGADVNTILITNLLSGMDYNVKIIASQASGLSDALTG
VVKTMFLGVTNLQAEDIEMTSLCAQWQVHRHATTYRIVLESLQDTQKQESTVGGGTNRHC
FYGLQPDSEYKISVYTKLQDIEGPSVSIMEKTQSLPTQPPTFSPTIPPAKEVCRTAKADL
VFMVDGSWSIGDDNFNKIINFLYSTVGALNKIGADGTQVAMVQFTDDPRTEFKLDSYKTK
ETLLEAIKNIAYKGGNTKTGRAIKHVRDTLFTTEAGTRRGIPKVIVVITDGRSQDDVDKI
SKEMQSDGYSIFAIGVADADYSELVSIGSKPSSRHVFFVDDFDAFKKIEDELITFVCETA
SATCPLVHMNGIDLAGFKMMEMFGLVEKDFSSMEGVSMEPGTFNVFTCYQLHKDALISQP
TKYLHPEGLPSDYTISILFRIIPDTPEEPFALWEILNKHSDPQVGVILDNGGKTLTYFNY
DYSGDFQTVTFEGPEIQKIFYGSFHKLHIVISKTLAKVVIDCKQVGERAINASANITSDG
IEVLGRMVRSRGPTGNSAPFQLQMFDIVCSTSWASRDKCCELPGLRDEETCSDLPHSCAC
SEASKGTLGPAGPPGGPGLRGPKGQRGEQGPKGPEGPRGTIGPQGPQGPPGPQGPSGLSI
QGMPGMPGKKGDKGETGLPGPQGVPGGVGSPGRDGSPGQRGFPGKEGSSGPPGPPGPIGI
PGAPGVPGITGSVGPQGSLGPPGVPGPKGERGERGDLQSQAMVRAVARQVCEQLIQNHMA
RYTAILNQIPSHVTSVRTVQGPPGEPGRPGSPGTPGEQGPPGTPGFPGNAGVPGTPGERG
LTGLKGDKGNPGIGTQGPRGPPGPAGPSGESRSGSPGPPGSPGPRGPPGHLGIPGPQGPS
GQPGYCDPSSCSSYGVGAPHPDQPEFTPIQDEMEAMELWGPEI
NT seq
6432 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcagcgccgaggagagcgcgcgcaggccagacaagcgctcgttgctggcccca
actccccgggagcgcctcacctggacctgggatgagccaaaggggactcctactgggtgc
gggggtcctggaagctgggaaattcgggcctggtctggggggcgggcgctggggggctcg
gcttgtccggtgcacccgttaaccaaccgggacggaggtgccagcgcgactccccgcgct
ctgccagggggctgccctggaaggggcgtggcgcgggcagggctcggtggagcagctccg
gggggcgggttggggaggggattaagggaaagggggggtggggatttggacttgcccttc
ctcccaacccccgcccccgaggcccccttcccctctccaattggccgccggcgagacctc
actttgctcttttctggtcttgtggggtgcgaggctggaggggagcgcaggagggcagaa
ggcggctcccgagtgccggagcccggagtgagaagcagagcgagttccaaagaggatccg
gggggaaacgagagggacttctactcgctccgaagtaactgtttcctctgggcgcctcca
actggtccgttaccggggctggagtcgggaagtgcacaggtcagtgccaaccgttttctg
tgtccgggatcagctttgcgaggaaggaaaaatggaagttggagggcctgtgacctgcaa
acgccatgcattgcatgggcctcattaaggaccacgaactacagatgcatgcagatggtc
aagagacctctgggatgccgtgggatggtgcatgtagatgctctccgaatgccccgagtg
cagtacactctgcagagaatgtctggggcaggagctttgagaggctccggggcgcaaatg
caaagaaagggaaggggccctaggtttctccgggagcttttctcagaatttgggtgcagt
gagctaaggcgtgtgtgtagggaagagggcttggtttggagacgggtggtttcaggctct
ccaagtcccttaattaagggaaacaaagtgaagatttttcagggcaggatgcagttttgg
ctgattccatctcttttgacaattgctcatcttttcactgttgtccagagtcaagtgtct
ccaccaacacggttaagatataatgtattatctcatgatagtctacagatttcctggaag
gccccaagagggaaatttggtggttacaaacttctcgtgactcctacatcaggtggaaaa
accaatcacttgaatctccagaacaccgcaactaaagcaattatacaagggcttatgcca
gatcagaattacacagtccaactcattgcatataataaagataaagaaagcaagcctgct
cagggacagttcagaattaatgatttagaaaaaaggaaggatccaaaacccaaaaaggtt
gtagacaaaggaaatgggagtaaaccgttttcacctgaagtaaaatttttctgtgaaact
tcagctattgctgatattgtaatcctggttgatgggtcttggagtattggaagattcaac
ttcagattggttcggcttttcttggaaaacttggtaacagccttcaatgtgggctcagag
aaaacacggattggtcttgcacaatacagtggtgaccccagaatagaatggcacttgaat
gcttttagtacaaaagacgaggtgattgaagctgttcgaaatctaccatacaagggagga
aatacacttacaggtcttgctttgaactacatatttgaaaatagctttaagccagaagca
ggagcaagaactggagtatccaaaattggcattttaataacagatggaaagtcccaagat
gatattattcctccatccagaaacctccgtgagtctggtgtagaactatttgccataggg
gttaaaaatgcagatgaaagcgaattgcaagagatcgcctcagaacccgatagtactcat
gtatacaatgtggctgagttcgacctcatgcatacagtagtagagagcctgacccgaact
gtgtgctcaagagtggaagaacaggacaaggagaacaaagctgcagcccttacacccact
ggaccacctacagagttgattatttctgaagtcactgccagaagctttatggttaactgg
acttatgccccaggaaaagtacaaaaatacagagttgtgtattatcctaccaggggtgga
aaaccagaagaggtggtggtggatgggagtgtctcttccaccatgttgaagggcttgatg
tcattaactgagtatcaggtagcagtcttcgcgatatatgcccacacagctagcgaaggc
ctacggggaagtgaaactacacttgctttaccaatggcttccaacctccagttgtatgat
gttactgagaacagtatgaaggccacctggaatgcagtgcccggggctactggctacctg
atcctttatgctcctctcactgaagatctggctggggatgaaaaagaagtgaaagttgga
gaaacacacacgaatgttgaattgagtggattgttgcccaacacagaatacacagtgaca
atttatgctatgtttggagaagaagccagcgatcctgtttctggacaagaaacaacattg
cctttaagtccaccacgaaacctgagaatctccaatgttggctctaacagcgctcggtta
gcctgggacccaacttcaagaaagattagtggttatagaattgtatacaacaatgaggac
gggactgaaatcaatgaggttgaagttgacccaatcactacattccctctgaaaagcctg
acacccctcacagagtacacagtcgccattttctccatctatgaagaaggacagtcagag
cctctgacaggcgttttcaccacagaggaagtcccagcccagcagtacttggaaattgat
gaggtgaagatagatagttttagagtgacctggcatcctctctcccctgatgaaggccag
cacaagttgatgtggatccctgtctatggtgggaagactgaagaagttttgctaaaagaa
gatcaagactctcatgttattgaaggtttggatcctggtactgaatatgaagtttcactt
ctggctgtaatggatgatggaagtgagaacgaagtggtaactgctgtcgggaccacactt
gacagtgattggacagaatcagccacaaccatagaacctaccacttctgtgacttcagtt
ttccggacaggaattaggaaccttgttgtagatgaggaaaccacttccagcctgtgggtg
aagtgggacatttctgacagcgatgtgttgcagttccgggtgacctacctgacagcccag
ggggatcctgcggaagaagtggtaggcacagttatggtacctggaaatgagaataatctc
cttctgccgtcattacttcctaacactgagtacaaggtcacagtgactcccatctacaat
gatgaagaaggtgtcagtgtctctgccccaggaaaaaccttgtcaccttctggtccccaa
aacttacgtgtttcagaagaatggtataacaggctgcgtatcacatgggatcccccagcg
tcccttgtaaagggctatagaattatctacaaacctattagtgtggctggaccaaccctg
gaaacatttgtgggagccgatgttaacaccattttgatcaccaacctcctcagtggtatg
gactacaatgtgaaaataattgcctcccaggcctcaggcctcagcgatgctctgacaggc
gtggtgaaaacaatgtttttgggtgtgaccaatctccaagcagaggacatagaaatgacc
agcttgtgtgctcagtggcaggtgcatcgtcatgctactacctatagaatcgttttagaa
tccctccaagatacacaaaagcaagaatctactgtgggtggaggaacaaacagacattgc
ttctatggacttcagcctgattctgaatataaaatcagtgtttacaccaagctccaggac
attgagggtcccagtgtgagcataatggaaaaaacacaatctctccccactcagccacct
actttctctccaactattccaccagcgaaagaagtatgcagaactgccaaagctgacctg
gtgtttatggtggatggatcctggagtattggagatgacaatttcaacaagatcattaat
tttctctatagcacagttggagccctgaacaagattggtgcagatggaacccaagttgca
atggttcagttcactgatgaccccagaacagaatttaaactggattcttacaaaaccaaa
gagactcttcttgaggctattaaaaatattgcatacaaagggggaaatacaaaaacagga
agagccataaagcatgtccgagataccttgtttacaacagaagcagggaccagaagaggc
atccccaaagttattgtggttataacagatggaagatctcaggatgatgtagataaaatc
tccaaggagatgcaatcagatggttacagcatttttgccattggggtggctgatgctgac
tactctgagttggttagcattggcagcaagcccagttcacgccatgtcttctttgtggat
gactttgatgcctttaagaaaattgaagatgagttgattacttttgtctgtgaaactgca
tcagcaacctgccctctggtccatatgaatggcattgatcttgcaggatttaagatgatg
gaaatgtttggtttggttgaaaaagacttttcatcaatggaaggagtttctatggagcct
ggcaccttcaatgtgttcacttgttaccaacttcataaggatgccttaatatcccagcca
accaagtatttgcatccagaaggattgccttctgactatacaatcagtattctatttcga
attattcctgacactccagaggaaccatttgctctttgggagattttaaataaacattct
gacccacaggttggggtcattttagataatggtgggaaaacactaacatatttcaactat
gactacagtggggattttcaaactgtaacttttgaaggacctgaaattcaaaaaattttc
tatggaagttttcacaagctacacattgttatcagcaagactttggccaaagtggttatt
gactgcaagcaagtgggtgagagggcaataaatgcatcagctaatatcacctctgatggt
atagaagtcctagggagaatggtcagatcaagaggacccactggaaactcagcaccattc
cagttacagatgtttgacattgtttgctctacctcatgggccagtcgagacaaatgctgt
gaactcccaggcctgagggatgaagaaacctgctcagaccttccacattcctgcgcctgc
tctgaagctagcaaaggaactctgggaccagcaggcccaccaggtggtccaggactccga
gggccaaagggccagcgaggtgaacagggcccaaagggaccagaaggccctcggggaaca
ataggcccccaagggcctcagggtccccctggaccccaaggaccaagtggtttgtctatc
caaggaatgcctggaatgccaggcaaaaaaggagataaaggagagactggtcttcctggc
ccacagggtgtcccaggaggtgttggttcacctggacgtgatggttcaccaggccagagg
ggatttcctggaaaagaaggatcctctggccccccgggaccacctgggccaattggcatt
cctggagcacctggagtccctgggattacaggaagtgtgggtccccaaggctctctggga
ccacctggagtacctgggccaaagggagagaggggggaaagaggggacctgcagtctcag
gccatggtgagagcagtggcgcgtcaggtgtgtgaacagctcatccagaatcacatggcc
aggtacacggccatcctcaaccagattcccagccatgtcacatcagtccggactgttcaa
ggacctcctggtgaacctggaagaccagggtcacctggaactccaggagagcaaggacct
ccgggtaccccaggctttccagggaatgcaggtgtgccgggaaccccaggagaacgaggt
ctaacaggtctcaagggagataaaggaaatcctggtattggaactcaaggcccaagagga
ccccctgggccagcaggaccttcaggagaaagtagatctggaagtcctgggcctcctggt
tctcctggaccaaggggaccaccaggtcatctgggcataccgggaccccaaggtccttct
ggccagcctggttactgcgatccttcttcatgttcttcctatggggttggagctccccat
ccggatcagccagaattcacccccatccaagatgagatggaagccatggaattgtggggc
ccagaaatctga
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