Suncus etruscus (white-toothed pygmy shrew): 126008729
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Entry
126008729 CDS
T09902
Symbol
SDC2
Name
(RefSeq) syndecan-2
KO
K16336
syndecan 2
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04514
Cell adhesion molecules
setr04820
Cytoskeleton in muscle cells
setr05144
Malaria
setr05205
Proteoglycans in cancer
setr05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
126008729 (SDC2)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
126008729 (SDC2)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
126008729 (SDC2)
09174 Infectious disease: parasitic
05144 Malaria
126008729 (SDC2)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
126008729 (SDC2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
setr04090
]
126008729 (SDC2)
00535 Proteoglycans [BR:
setr00535
]
126008729 (SDC2)
CD molecules [BR:
setr04090
]
Proteins
126008729 (SDC2)
Proteoglycans [BR:
setr00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
126008729 (SDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
DUF2721
Glycophorin_A
Cadherin_C_2
ATG22
Motif
Other DBs
NCBI-GeneID:
126008729
NCBI-ProteinID:
XP_049628914
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All DBs
Position
5:153344422..153450771
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AA seq
355 aa
AA seq
DB search
MCVCQWAVCVCVVCVAAARRVRVSDGLALGGAQLQSGGAVAVRCGRGRRVGPSVGPGGGG
RARAGGGAGAGAAVQSQPGSCSRAPAPHRSAPVRTAAPRPRPVSPLGSSRRAPQPPKGGL
REAGAAGGARPDPTRPDHGVRVPGPPVPPGPREHAARVDPAGPWAWWACASAESRAELTS
DKDMYLDNSSMEEASGAYPIDDDDYASASGSGAEEDMETPEQMTSRPLPKMPITSAMPRV
ESLPPKTQSKVPAHTQSPEEVDKEDIPVSETERKIDTAEEDTNVYTEKHSDNLFKRTEVL
AAVIAGGVIGFLFAIFLILLLVYRMRKKDEGSYDLGERKPSSAAYQKAPTKEFYA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtatgccagtgggctgtgtgcgtgtgtgtggtgtgtgtggccgcggcgcggcgt
gtgcgtgtctccgacgggctggccctgggcggggcgcagctgcaatcgggcggcgcggtg
gcggtgcggtgcgggcgtgggcggcgggtggggccatcggtgggtccgggaggcggcggg
cgggcgcgcgcgggaggcggagccggggccggggcggctgtccagagccagccggggagc
tgcagccgcgcgcccgcaccgcaccgctccgcgcctgtccgcaccgccgcgccccgcccc
cgcccggtgtccccgctcggctcgtcccggcgcgccccgcaacctccgaagggagggctc
cgcgaggccggggcggcgggcggggcgcgccccgacccgacccgacccgaccacggcgtc
cgcgtccccggccccccggtccctccgggccctcgggaacatgcggcgcgcgtggatcct
gctggcccctgggcttggtgggcctgcgcgtcggccgagtcgagggcagagctgacatcg
gacaaggacatgtacctggacaacagctccatggaagaagcttccggagcataccccatc
gatgacgatgactacgcttcagcctcgggctcgggagctgaggaggacatggagacccca
gagcagatgacatcacggcccctcccaaagatgcccatcaccagtgccatgcccagagtg
gagagcctgccacccaagacacagagcaaggtgcctgcacacacacagtctcctgaagaa
gtggacaaagaggacattcctgtctccgagacagagaggaagatagacacagctgaggag
gacacgaatgtgtacacagagaagcactcggacaatctgttcaaacgtacagaagtcctt
gcagcggtgattgcaggtggagtgatcggctttctctttgccatttttctcatcctgctg
ttggtctatcgcatgcggaagaaggacgaaggcagttacgaccttggcgaacggaaaccc
tccagcgctgcctaccagaaggcccccaccaaggagttttatgcgtga
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