Suncus etruscus (white-toothed pygmy shrew): 126008924
Help
Entry
126008924 CDS
T09902
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04137
Mitophagy - animal
setr04141
Protein processing in endoplasmic reticulum
setr05014
Amyotrophic lateral sclerosis
setr05022
Pathways of neurodegeneration - multiple diseases
setr05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126008924 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
126008924 (VCP)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
126008924 (VCP)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
126008924 (VCP)
05022 Pathways of neurodegeneration - multiple diseases
126008924 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126008924 (VCP)
03009 Ribosome biogenesis [BR:
setr03009
]
126008924 (VCP)
04131 Membrane trafficking [BR:
setr04131
]
126008924 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
setr04147
]
126008924 (VCP)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
126008924 (VCP)
Ribosome biogenesis [BR:
setr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
126008924 (VCP)
Membrane trafficking [BR:
setr04131
]
SNARE
SNARE associated proteins
Others
126008924 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
126008924 (VCP)
Exosome [BR:
setr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
126008924 (VCP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
DUF3944
Zot
Motif
Other DBs
NCBI-GeneID:
126008924
NCBI-ProteinID:
XP_049629172
LinkDB
All DBs
Position
1:complement(61086367..61108190)
Genome browser
AA seq
806 aa
AA seq
DB search
MASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDSCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGSGGGTGGSVYTEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctccggagctgattcaaagggtgatgatttatctacagctattcttaaacagaaa
aaccgacccaatcggttaattgttgatgaagccatcaatgaggacaacagcgtggtatca
ttgtcccagcccaagatggatgaactgcagttgttccgaggtgacactgtgttgctgaaa
ggaaagaagaggcgggaagcagtgtgcattgtgctgtcagatgactcttgttctgatgag
aagattcgaatgaatagagttgttcggaataaccttcgagtacgcctaggggatgttatc
agcatccagccatgccctgatgtgaagtacggtaaacgtatccatgtgctacccatcgat
gacacggtggaaggtatcactggcaatctctttgaggtttatctaaagccgtacttcctg
gaagcttatcgacccattcggaaaggtgacatttttcttgtccggggtggaatgcgtgct
gtagaattcaaagtagtggagacagatcctagtccttattgcattgttgctccagacaca
gtgatccattgtgaaggagaacccatcaaacgagaggatgaggaagagtctttgaatgaa
gtaggctatgatgacattggtggctgcagaaaacagctagctcagattaaggagatggtg
gagttacctctgagacaccctgccctctttaaggcaattggtgtgaagcctcctcgggga
atcctactctatggacctcctggaactggaaagaccctgattgctagagcggttgcaaat
gagactggagccttcttcttcttgattaatggtcctgaaatcatgagcaaattggctggt
gagtctgagagcaaccttcgtaaagcctttgaggaggctgagaagaatgctcctgctatc
attttcattgatgaactagatgccattgctcccaaaagagagaagacccatggggaggta
gagcggcgtattgtatcacagttgttgacccttatggacggcttaaagcagagagcacat
gtgattgttatggcagcaaccaatagaccaaacagcattgatccagccctacggcgattt
ggccgctttgacagggaggtggatattggaatccctgatgctacagggcgcttggaaatt
cttcagattcataccaagaacatgaagctggcagatgatgtggatctagaacaggtagct
aatgagactcatgggcatgtgggtgctgacttggcggctttgtgctctgaagctgctctg
caagccatccgcaagaagatggatctcattgacttagaggatgagactattgatgctgaa
gtcatgaactccctggcagttactatggatgacttccggtgggccctgagccagagcaac
ccatcagcactgcgggaaaccgtggtggaggtgccacaggtgacctgggaggacattggg
ggactggaggatgttaaacgtgaacttcaggagctggtccagtatcctgtggagcaccca
gacaaattccttaagtttggcatgacaccctccaagggagttcttttctatggacctcct
ggctgtgggaaaactttgctggctaaagccattgctaatgagtgccaggccaacttcata
tccatcaagggtcctgaattgctcaccatgtggtttggggagtctgaggccaatgtcagg
gaaatctttgacaaggctcgccaagctgccccatgtgtattgttctttgatgagctggat
tcaattgccaaagcccgtggtggcaacattggagatggtggtggagctgctgatcgagtc
atcaaccagatacttacagaaatggatggcatgtctaccaaaaagaatgtgtttatcatt
ggcgctaccaaccgacctgacatcattgatcctgccattctgcgacctggtcgccttgat
caactcatctacatccctcttcctgatgagaaatcccgtgttgctatcctcaaggccaac
ctacgcaaatctccagtagccaaggatgtggatctggagttcttggctaagatgacaaat
ggcttctctggagctgacttgacagagatttgccaacgtgcttgcaagcttgccattcgt
gaatctattgagagtgagattaggcgagaacgggagagacagaccaacccatcagccatg
gaagtagaggaggatgatccagtgcctgagattcgccgagatcactttgaggaagccatg
cgtttcgcccgccgttctgttagtgataacgacattcggaagtacgaaatgtttgctcag
actcttcagcagagtcggggctttggcagcttcagattcccatcaggaaaccagggtgga
gctggccctagtcagggcagtggaggtggcacaggtggcagtgtgtacacagaagacaat
gacgatgacctgtatggctaa
DBGET
integrated database retrieval system
