Suncus etruscus (white-toothed pygmy shrew): 126009046
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Entry
126009046 CDS
T09902
Symbol
SNED1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
setr04990
]
126009046 (SNED1)
Domain-containing proteins not elsewhere classified [BR:
setr04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
126009046 (SNED1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_2
EGF_CA
Fn3_Dep-1_4th
Ig_DSCAM-DSCAML_C
EGF_3
CzcE
Prok-JAB
DUF4989
Motif
Other DBs
NCBI-GeneID:
126009046
NCBI-ProteinID:
XP_049629341
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All DBs
Position
5:complement(109580409..109607986)
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AA seq
1222 aa
AA seq
DB search
MPRSVAWALLWAVALGLGARGAHGAVALADFYPFGVEQGDSITPKQDDGGSGLRPLSVRF
PFFGAEHSGLYVNNNGVISFLKEVSQFTPAAFPIAKDRCVVAAFWADVDNRHAGDVFYRE
ATDAATLRRASADVKHYFPELPGFSATWAFVATWYRVTFFGGSASSPVNTFQTVLLTDGN
FSFTIFNYAAITWTTGTHASSGGNATGLGGIAAQAGFNAGDGQRYFSIPGSRTANMADVE
ATTNVGVPGRWAFRIDGAQVHVGGCSPAMSVCLAQKPCLNGGECIDDCMPGSPSFACSCL
SGFEGQRCHLDVNECASQPCQNGGTCTHGVNSFSCQCLAGFRGPTCEADMDECSSAPCLN
GGSCVDLPGSFSCLCPKPFDGPRCEAGGPLRPDACLDALCHNGGTCVDTDTGYVCECPGG
FMGRDCSERTLDTCECHNGGRCLGANSATCQCPPGFFGLLCEFEVTSTPCDMNTQCPDGG
YCMEHAGSHLCVCHHSHPSTSHSMPSPCDSDPCFNGGSCDAQDGVYTCECPSGFQGQHCE
KAKPRLCSSGPCRNGGTCRETGGDFHCSCPFRFTGRRCEIGKPDPCASGPCHNGGTCFHY
IGKYKCDCAPGFSGSHCEHAPSPCFWSPCVNGATCEDRGSDFACRCPPGFTGRRCQAETD
KCRSQPCLHGGTCQDLPVGYLCHCRPGREGARCEREVRMCQAQPCRNGGSCQDIPGAFVC
KCPTGFSGALCDQEATPCACSPCQHGGRCEDGGAGAYLCVCPEGFFGYHCETAGDPCFSS
PCGDHGYCLGNNGSHSCACRAGYTGDGCGQELPPPTGLELQQVEESGLWVSWHPPADPAA
QQLLDGYAVSYASSDGIPRRTDFVERSHSSHQLQALAAGRAYNVSVFSVKRNTNNRNDIS
RPVVLLARTRPHPIEGLEVINVTASAVWVRWALHRIRHATVSGVRLTLHQPGAQEAQTAD
VDQHVDKFMFGELLPGRRYTIHVAALSGQVGQEPSTESLASAPLHIWTRPLPPANLSAAR
VTATSAHVVWDAPVPGTQLEAYVINVTASQSTKSRYVPNGRLLAYTVRDLAPGRHYQLSV
TAVQGAEGQQLHSEPANLYIITSPRDSVDRRWHREGPQPRGLRNRMMPAHLPELRLLSNQ
GGPQTPTQAPRFSELVGGRGHTSAKAGSAASKSVPMRPEHPTLAQPRNPDEAAQRPKGNA
RDKDLNSMSGVTDLSRSPQKRT
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcagcgttgcttgggcgctgctctgggctgtagccctggggctcggggcgcgc
ggggcgcacggcgcggtagccctcgccgacttctaccccttcggcgtggagcagggcgac
tcgatcacccccaagcaggacgacggcggctcggggctgcggccgctctccgtgcgcttc
cccttcttcggcgccgagcactcgggcctctacgtgaacaataacggggtcatctcgttc
ctgaaagaggtatctcagttcaccccggcggctttccctattgccaaggaccgctgtgtg
gtggcagccttctgggctgatgtggacaatcgacatgcgggcgatgtgttctaccgcgag
gccaccgatgctgccacactgcgcagggccagtgccgatgttaagcactatttccctgag
ctgcctggcttctcggccacctgggccttcgtggccacctggtaccgtgtgaccttcttc
ggaggaagtgcctcctcccctgtcaacacattccagacggtgcttctcaccgacggcaac
ttctccttcaccatcttcaactacgcagccatcacctggaccacgggaacgcatgccagc
agcgggggcaatgccacaggcctggggggcatcgcagcccaggcaggcttcaatgcaggg
gacgggcaacgctactttagcatccctggctcccgcaccgccaacatggctgatgttgaa
gcaaccaccaacgtgggagtgcccggccgctgggccttccggatcgatggtgcgcaggtg
cacgtggggggctgcagtcctgcaatgtccgtgtgcctggcacagaagccctgtctcaac
ggcggggagtgcatcgatgactgcatgcctggcagcccctcctttgcctgctcttgcctc
tcgggcttcgagggacagaggtgccacctggatgtaaatgaatgtgcctctcagccatgt
cagaatggggggacctgtacccatggtgtcaacagcttcagctgccagtgcctggccggt
ttccgggggcctacctgtgaagcagacatggatgaatgcagctcagcaccctgcctgaat
ggaggctcctgtgtggacctgccgggcagcttctcctgcctgtgcccgaaaccttttgat
ggccctcgctgtgaggcaggaggtcccctcaggcccgatgcctgcctcgatgccctatgc
cacaatggtggcacgtgtgtggacaccgacaccggctacgtgtgtgaatgccctggaggg
ttcatgggccgtgactgcagtgagagaactttggacacctgtgagtgccacaatggaggc
cggtgcctgggggccaatagtgccacttgccagtgccctccaggcttctttgggctcctg
tgcgagttcgaggtcacatccacgccttgtgacatgaacacacagtgtccggatggtggc
tactgtatggagcatgcgggcagccacctatgcgtgtgtcaccacagccaccccagcacc
agccactccatgccttcgccctgcgactcggacccctgcttcaacgggggttcgtgtgat
gcccaggatggggtctacacatgcgagtgtcccagcggcttccaagggcagcactgcgaa
aaagccaagcctcggctgtgcagctcggggccctgccgcaacgggggaacctgccgggag
acaggcggcgacttccactgcagctgccccttccgcttcacaggacgccgctgcgagatc
gggaagccggacccctgcgcctcgggcccctgccacaatggcggcacctgcttccactac
atcggcaaatacaagtgcgactgcgccccgggcttctcggggtcgcactgcgagcacgcc
ccgtctccctgcttctggagcccgtgtgtgaacggagccacctgtgaggaccggggctcg
gatttcgcttgccgctgcccgccagggttcactggccgcaggtgtcaggcagagacagac
aagtgcagatcccagccctgcttgcatggaggtacctgccaggatctgcctgtggggtat
ctatgccactgccgcccagggcgtgagggggcccgctgtgagagggaggtgcgcatgtgc
caggcgcagccatgcaggaatggaggctcctgccaggacatcccgggtgcctttgtgtgc
aagtgtcccactggcttctcaggagccctctgtgatcaggaggcaaccccttgtgcctgc
agcccctgccagcacggaggccgctgtgaggacggtggggccggggcctacctgtgcgtg
tgccctgagggcttcttcgggtaccactgcgagacagcaggcgacccctgcttctccagc
ccctgtggggaccacggctactgtctgggcaacaatggctcccacagttgtgcctgcagg
gctggctacactggcgatggctgtggccaagagctgccgccgcccacgggcctggagctg
cagcaggtggaggagagtggtctgtgggtgtcctggcacccacccgctgacccagctgcc
cagcagctgctggatggctatgcagtatcctatgcctcgtctgacggcatcccccgccgc
accgacttcgtggagcgaagccactcgtcacaccagctgcaggcgctggcagccggccgg
gcctacaatgtctctgtgttctctgtcaagcgcaacaccaacaaccgcaatgacataagt
cgacctgtagtgctgctggcccgcacacgacctcacccaatcgaaggtcttgaggtcatc
aatgtgacagccagtgctgtgtgggtgcgttgggccctgcaccggatccgacatgccaca
gtcagtggcgtccgcctgactctgcaccaacccggggcccaggaggctcagacggctgat
gtggaccagcatgtggacaagttcatgttcggggaactgctgccgggaaggaggtacacc
atccatgtggcagccctcagcgggcaggtggggcaggagccctccactgagagcctggcc
tcagccccactgcacatctggacccggcccctgccccccgccaacctgagcgctgcccgg
gtcacggccacctctgcccatgtggtgtgggatgcacctgtgcccggcacccagctggag
gcttacgttatcaacgtcacagccagtcagagcaccaagagccgctacgtccccaacggg
cggctgctggcctacactgtacgagacctggcgcctgggcgccactaccagctctctgtg
acggccgtgcagggcgccgagggccagcagctgcacagcgagccagcgaacctgtacatc
atcacctctcccagggacagtgtggacagacgctggcaccgggagggcccgcagccccga
gggctcaggaaccggatgatgcccgcacacctgccggagctgcgcctgctgagcaaccag
ggtggcccccagacacccacccaggcccccaggttctcagagctggtgggtggcagagga
catacaagtgccaaggcaggcagtgcagccagcaagtcagttcccatgaggccagagcac
ccaaccctggcacaacccaggaacccagatgaggcagcccagcgccccaaaggaaacgcc
agggacaaggatttgaacagcatgagcggcgtgaccgacctctccaggtcccctcagaag
aggacttga
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