Suncus etruscus (white-toothed pygmy shrew): 126009047
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Entry
126009047 CDS
T09902
Symbol
TAF2
Name
(RefSeq) transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126009047 (TAF2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
setr01002
]
126009047 (TAF2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
setr03021
]
126009047 (TAF2)
03036 Chromosome and associated proteins [BR:
setr03036
]
126009047 (TAF2)
Peptidases and inhibitors [BR:
setr01002
]
Metallo peptidases
Family M1
126009047 (TAF2)
Transcription machinery [BR:
setr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
126009047 (TAF2)
Coactivators
SAGA/TFTC/STAGA complex
126009047 (TAF2)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
126009047 (TAF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1_N
Peptidase_M1
RNA_polI_A34
SR-25
Motif
Other DBs
NCBI-GeneID:
126009047
NCBI-ProteinID:
XP_049629342
LinkDB
All DBs
Position
5:complement(105652488..105743294)
Genome browser
AA seq
1199 aa
AA seq
DB search
MPPAGLEPARMNRKKGDKGFESPRPYKLTHQVVCINNINFQRKSVVGFVELTIFPTVANL
NRIKLNSKQCRIYRVRINDLEAAFIYNDPTLEVCHNESKQRNLNYFSNAYAAAVSAVDPD
AGNGELCIKVPSELWKHVDELKVLKIHINFSLDQPKGGLHFVVPSVEGSMAERGAHVFSC
GYQNSTRFWFPCVDSYSELCTWKLEFTVDAAMVAISNGDLVETVYTHDMRKKTFHYMLTI
PTAASNISLAIGPFEILVDPYMHEVTHFCLPQLLPLLKHTTSYLHEVFEFYEEILTCRYP
YSCFKTVFIDEAYVEVAAYASMSIFSTNLLHSAMIIDETPLTRRCLAQSLAQQFFGCFIS
RMSWSDEWVLKGISGYIYGLWMKKTFGVNEYRHWIKEELDKIVAYELKTGGVLLHPIFGG
GKEKDNPASHLHFSIKHPHTLSWEYYTMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLA
STASSQKFQSHMWSQMLVSTSGFLKSISNVSGKDIQPLIKQWVDQSGVVKFYGSFAFNRK
RNVLELEIKQDYTSPGTQKYVGPLKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNK
KKKIPLMNGEEVDMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQADFMWQYQLRYERDVV
AQQESILALEKFPTPASRLALTDILEQEQCFYRVRMLACFCLAKIANSMVSTWTGPPAMK
SLFTRMFCCKTCPNIVKTNNFMSFQSYFLQKTMPVAMALLRDVHNLCPKEVLTFILDLIK
YNDNRKNKFSDNYYRAEMIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNME
KLLPSYRHTITVSCLRAIRVLQKNGHVPSDPALFKSYAEYGHFVDIRIAALEAVVDYTKV
DRSYEELQWLLTMIQNDPVPYVRHKILTMLTKNPPFIKNMESPLCNEALVDQLWKLMNSG
TSHDWRLRCGAVDLYFTLFGLSRPSCLPLPELGLVLNLKEKKAVLNPTIIPEAIADSQEV
VINPSIHAQLIGFQNPFSNSQDEEEIDMDTVHDSQAFISHHLNMLERPSTPGLSKFRPAV
SRSSLMPQHSSGSEGPPATKPPWNLELSRKGTGKEPTPMELSAHPTAAAPLSMFTKESAS
SKHSDHHHHHHHEHKKKKKKHKHKHKHKHKHDSKEKDKEPFTFSSPASGRSIRSPSLSD
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccgcggggctcgagcccgccaggatgaacaggaagaagggggacaagggcttc
gagagcccccggccctataaattaactcaccaggtcgtttgtatcaataacatcaacttc
cagaggaaatctgtggtgggctttgtggaattgactatatttcctacagttgcaaacttg
aacagaatcaagttgaacagcaagcagtgtagaatataccgagttaggatcaacgattta
gaagctgcttttatttacaatgatccaaccttggaagtttgtcacaatgaatcaaaacag
agaaatctcaattatttttccaatgcttatgcagctgcggttagtgctgtggatcctgat
gcaggaaatggagaactttgtattaaggttccatcagaattatggaaacatgttgatgaa
ttaaaggttctaaagatacacatcaatttttctttggatcagcccaaaggaggtctgcat
tttgtggtacccagtgtagagggaagtatggcggagagaggtgctcatgttttctcctgt
ggatatcaaaattctacaagattttggttcccatgtgttgactcgtattctgaattgtgc
acttggaaattagaatttacagtagatgctgcaatggtggccatttccaatggagacttg
gtggagacagtgtatacccatgatatgagaaagaagaccttccattacatgttgaccatt
ccaactgcagcttctaatatctccttggccattggaccttttgaaatacttgtagatcca
tacatgcatgaagttactcatttttgtttaccccaacttcttccattgcttaaacatact
acatcatatcttcatgaggtgtttgaattctatgaagaaattcttacatgtcgatatcca
tattcttgttttaagactgtattcattgatgaagcttatgttgaagtggctgcttatgca
tccatgagtatttttagcacaaatctgttacacagtgccatgatcatagatgagactcct
ttgactaggaggtgcttagcacagtcgttggcccagcagttttttggatgttttatatcc
agaatgtcttggtctgatgaatgggtactaaagggaatttctggctatatttatggactt
tggatgaaaaaaactttcggtgttaatgaataccgccattggatcaaagaggagctagac
aaaatagtggcgtatgaactaaaaactggtggagttttactacatcctatatttggaggg
ggaaaagagaaagataatccggcatcccacctgcatttctcaataaagcatccacatacg
ctctcctgggaatactatactatgtttcagtgtaaagctcatctagtgatgaggttgatt
gagaatagaatcagtatggaatttatgctgcaggtttttaataaattgctaagtttggct
agtactgcgtcatctcagaagttccagtcgcatatgtggagtcagatgttggtttccaca
tctggatttttgaagtctatctcaaatgtctctggcaaagacatccagcctttaataaag
caatgggtagatcagagtggagtagtaaagttctatggaagttttgcatttaatagaaaa
cgaaatgtcttggaattagaaataaaacaagattatacatctcctggaactcagaaatat
gtgggaccacttaaagtgacagtgcaggagttagatggatccttcaatcatacattgcaa
attgaagaaaacagccttaaacatgatattccgtgccattctaaaagcaggagaaataag
aagaaaaaaattccattgatgaatggagaagaagttgacatggatctctctgcaatggat
gccgactctcctttgctgtggataaggattgatcccgatatgtctgtcctgaggaaggta
gagtttgaacaggctgatttcatgtggcaataccagctccgctatgagagggatgttgtt
gcacagcaggaatccattttggctctggaaaagtttcctactcctgcatctcgtcttgcc
ctcaccgacatattagaacaagaacagtgtttctaccgagtacgaatgttggcctgcttt
tgcctcgcaaagattgcaaattcaatggtgagcacatggactggaccaccagccatgaag
tcactcttcactagaatgttctgttgtaagacttgtccaaatatcgtgaaaacaaacaac
ttcatgagttttcaaagttatttcctacagaagactatgccagttgcaatggccttattg
agagacgttcacaatctttgtcccaaagaagtcttaacatttattttagacttaatcaag
tacaatgacaacagaaaaaataagttttcagataactattatcgtgccgaaatgattgat
gcccttgccaattctgttacgcctgcagtcagtgtgaataatgaagttcgaactttggat
aacttaaatccggatgtgcgactcatacttgaggaaatcaccaggtttttgaatatggag
aaacttcttccaagttatagacataccatcactgttagttgtctgagagcaatacgagtg
ctgcagaagaatggacatgtgccaagtgatccagctcttttcaagtcttacgcagaatat
ggccactttgtagacattcggatagcggctttggaagctgtggttgattatactaaagtg
gacaggagttatgaagaactacaatggctacttactatgattcagaatgaccctgtaccc
tatgtaaggcataaaattctgaccatgctgaccaagaacccaccatttatcaagaacatg
gagtctcccttatgcaatgaggcccttgttgatcagctttggaaactaatgaattctggt
acctcgcatgactggagattacgctgtggtgctgtggacctgtacttcaccctttttggc
ctcagtagaccatcatgcctacccttaccagaacttgggttggttcttaacctaaaagag
aaaaaagctgttttgaatcctactataattccagaggccatagcagacagtcaagaagtt
gtgattaatccaagtattcacgcacagctcattggatttcagaaccctttttctaattct
caagatgaggaggagattgatatggatactgttcatgatagtcaggcctttatttcccat
cacttgaatatgcttgaaagaccatcaactccagggctctctaaatttcggccagctgtc
tctagatcttctctgatgcctcagcactcatcaggaagcgagggcccacctgccacgaaa
cccccatggaatctggaacttagccggaaaggaacaggtaaggagccaacacctatggaa
ttgagtgcacatcccacagcagcagctccactctccatgttcactaaggaatcggcatcc
tcaaaacacagtgaccaccatcaccaccaccaccatgagcacaagaagaagaagaagaag
cacaaacataagcacaagcataagcacaagcatgacagtaaagagaaagacaaggagcct
ttcactttctccagccctgccagtggcaggtctatccgttccccttctctctctgactga
DBGET
integrated database retrieval system
