Suncus etruscus (white-toothed pygmy shrew): 126009060
Help
Entry
126009060 CDS
T09902
Name
(RefSeq) tetratricopeptide repeat protein 30B-like
KO
K19683
tetratricopeptide repeat protein 30
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
setr03037
]
126009060
Cilium and associated proteins [BR:
setr03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
126009060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_16
ANAPC3
TPR_1
TPR_CcmH_CycH
ARM_TT21_C
TPR_Slam
DASH_Dad2
TPR_6
TPR_8
Ribosomal_S16
Motif
Other DBs
NCBI-GeneID:
126009060
NCBI-ProteinID:
XP_049629370
LinkDB
All DBs
Position
5:88515337..88517334
Genome browser
AA seq
665 aa
AA seq
DB search
MAGPGGGQIPDGEFTAVVYRLIRDSRHAEAVQLLSGELQRSPSSRAGLSLLGYCYYRLQE
FALAAECYEQLGHLHPELEQYRLYQAQALYKACLYPEATRVAFLLLDNPVYHNQVLHLQA
TIKYSEGDLPGARSLVEQLLSGEGGEESPGESEPDNQVNLGCLLYQEGQYEAASSKFAAA
LQASGYQPDLSYNLALACYSSRLYAPALKHIADIIERGIRQHPELVVGMTSEGIDVRSVG
NTLVLHQTALVEAFNLKAAIEYQLRNFEVAQETLTDMPPRSEEELDPVTLHNQALMNMDA
RPTEGFEKLQFLLQQNPFPPETFGNLLLLYCKYEYFDLAADVLAENAHLTYKFLTPYLYD
FLDAMITCQTAPEEAFVKLDGLAGMLTEQLRKLTKQVQEARHNRDDEAVKKAVNEYDDIL
EKYIPVLMAQAKIYWNLENYSMVEKIFRKSVEFCNDHDVWKLNVAHVLFMQENKYKEAIG
FYEPIVKKHYDNILNVSAIVLANLCVSYIMTSQNEEAEELMRKIEKEEEQVSYDDPDKKI
YHLCIVNLVIGTLYCAKGNYDFGISRVIRSLEPYNKKLGTDTWYYAKRCFLSLLENMSKN
MVILRDSVIQECIQFLEHCEFFGRNIPAVIEQPLEEERMHIGTNTVTYESRQLKALIYEI
IGWNL
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcctggcggtgggcagatcccggatggcgagttcaccgcggtcgtgtaccgc
ctcatccgggactcccggcacgccgaggcggtgcagctgctgagcggggagctccagcgt
agccccagcagtcgcgccggcctctcgctgctgggctattgctactaccgcctgcaggag
ttcgcgctagcggccgagtgctatgagcaactggggcacctgcacccagagctggagcag
taccgcctgtaccaagcccaggcgctgtacaaggcctgcctgtaccccgaggccacgcgc
gtcgccttcctgctcctggacaaccccgtctatcataaccaagtgttgcatctccaagcc
accattaagtatagcgagggcgacctgccaggggccaggagtctggtggagcagctgctg
agtggggaagggggagaagaaagtccaggggagagtgagcccgataaccaggtcaacctg
ggctgcttgctctaccaggagggacagtatgaggccgcgagttccaagtttgctgcagcc
ctgcaggcctcaggctatcagcctgacctctcctacaacctggctttggcctgttacagc
agccggctctatgccccagccttgaagcacatagctgacattattgaacgcggtatccgc
cagcacccagagctagttgtgggcatgacctcagagggcattgacgttcgcagtgtgggc
aacaccctagttcttcaccagacagctctggtggaagccttcaacctcaaggcagctatt
gaataccaactgagaaactttgaagtggcccaggaaactctcacagacatgccacctcgg
tcagaggaagaattggatccggtgaccctgcacaaccaagcactcatgaacatggatgct
aggcctacagaagggtttgaaaagctacagttcctgctccagcagaaccccttcccccca
gagacctttggcaaccttttgctgctctactgtaagtatgagtattttgacctagccgct
gatgtcctggcagaaaatgcccatttgacttataagttcctcacaccatatctctacgac
ttcttggatgccatgatcacttgccagacagctcctgaagaggcttttgttaagcttgat
gggctggcagggatgctgactgaacagctccgaaaactaactaaacaagtacaggaagca
agacacaatagagatgatgaggctgtcaagaaggcagtgaatgaatatgatgacatcctt
gaaaagtatatccccgtgttaatggctcaagccaaaatctactggaacttggaaaattac
tcaatggtggaaaagatcttccgcaaatccgtagaattctgtaacgaccacgatgtgtgg
aagttgaatgtggctcatgttctgttcatgcaggagaacaaatacaaagaagcgattggt
ttttatgagcccatagtcaagaagcattatgataacatcctgaatgtcagtgctattgtg
ctggctaacctctgtgtttcttacattatgacaagtcaaaatgaagaagccgaggagctg
atgagaaagattgaaaaggaggaagagcaggtctcctatgatgatcctgataaaaagatc
taccacctctgcattgtgaatctggtgatcgggacactttattgtgccaaaggaaattat
gactttggtatttctcgggtcatcaggagcttagaaccttataataaaaaattgggaact
gatacctggtattatgccaagagatgtttcctgtccttactagaaaatatgtcaaaaaac
atggtaatactccgtgacagtgtcattcaagaatgcattcaatttcttgaacactgtgaa
ttttttggaagaaacatacctgctgttattgaacaacctctggaagaagaaagaatgcat
attggaactaatacagttacatatgaatccagacagttaaaagctttaatttatgaaatt
ataggatggaatttgtag
DBGET
integrated database retrieval system
