Suncus etruscus (white-toothed pygmy shrew): 126009071
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Entry
126009071 CDS
T09902
Symbol
SNTB1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04820
Cytoskeleton in muscle cells
setr05410
Hypertrophic cardiomyopathy
setr05412
Arrhythmogenic right ventricular cardiomyopathy
setr05414
Dilated cardiomyopathy
setr05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
126009071 (SNTB1)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
126009071 (SNTB1)
05412 Arrhythmogenic right ventricular cardiomyopathy
126009071 (SNTB1)
05414 Dilated cardiomyopathy
126009071 (SNTB1)
05416 Viral myocarditis
126009071 (SNTB1)
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Gene cluster
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Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
126009071
NCBI-ProteinID:
XP_049629387
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All DBs
Position
5:complement(106545867..106878732)
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AA seq
538 aa
AA seq
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MALAAVATTGAGGAGGGRAQRSGLLEVLVRDRWHKVLVNLSDDALLLSCDEAAAAYNGIA
TTATNGSLGRGAGGGGGGGPGQPPDSPAAGVRSAFADLAEQVPESISNQKRGVKVLKQEL
GGLGISIKGGKENKMPILISKIFKGLAADQTQALYVGDAILSVNGADLRDATHDEAVQAL
KRAGKEVLLEVKYMREATPYVKKGSPVSEIGWETPPPESPRLGASSSDPLSTQSFSFHRD
RKNIPLKMCFVTRSLALADPENRQLEIHSPDAKHTLILRSKDSATAQAWFSAIYSNVSEL
LTRVIAEVREQMGKTGIAGSRDIKHLGWLAEKVSGENEKQWKPTLLVLTEKDLLIYDSMP
RRKEAWFSPLHTYPLLATRLVHSGPGKGSPQVGVDLSFATRTGTRQGIETHLFRAEISRD
LSHWTRSIVQGCHNSAELVTEITTACTYKNQECRLTIHYENGFSISTEPQEGVFPKTILQ
SPYEKLKMSSDDGIRMLYLDFGGKDGEIQLDLHSCPKPIVFIIHSFLSAKITRLGLVA
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcgctagcggcagtggctacgaccggggccggcggggcaggaggcggccgcgcgcag
cggagcgggctgctggaagttttggtgcgcgatcgctggcacaaagttctggtgaacttg
agcgacgacgccctgcttctcagctgcgacgaggctgccgcggcgtacaacggcatcgcc
acgacggccaccaacggctcgctgggcagaggagctggaggtggaggcggcggcggcccg
gggcagccccccgactcgcccgccgccggggtccgcagcgccttcgccgacctggccgag
caggtgcccgagtccatctccaaccagaagcggggcgtgaaggtgctcaagcaggagctg
ggcggcctgggcatcagcatcaaggggggcaaggagaacaagatgcccatccttatcagc
aagatcttcaaggggctggcggccgaccagacccaggccctgtatgtgggcgacgccatc
ctgtccgtgaacggggccgacctgcgcgacgccacccacgacgaggcggtgcaggcgctg
aagcgcgcgggcaaggaagtgctgctggaagtgaagtacatgcgagaagccacaccctat
gtgaaaaaaggctccccagtgtccgagattgggtgggaaactcctccacctgagtcacct
cggttaggggccagctcctcggatcccctgtctacacagtccttctccttccatagagac
cggaaaaacatccccctcaagatgtgcttcgtaacaaggagtctggccttggctgaccct
gagaacaggcagcttgaaatccactctccagatgcaaaacacacgttgatcttacggagc
aaggactcagctactgctcaagcctggttcagcgccatctattccaatgtcagtgagctg
ctgactcgtgtgatagctgaagtccgagagcagatgggaaaaacaggcattgccgggagc
cgagatatcaaacatcttggctggctcgcagaaaaggtttctggggagaatgaaaaacag
tggaagccaaccctgctcgtactgactgagaaggatcttttaatctatgacagcatgcca
cggaggaaggaagcatggttcagtcccttgcacacgtatcctcttcttgccaccaggttg
gtgcattctggaccagggaaaggatcccctcaggttggcgtggatttgtccttcgctaca
cgcactgggactaggcagggcatcgaaacccatctcttcagggctgagatcagcagagac
ctctcacattggaccagaagcattgtccagggctgccacaactcagctgagctggttaca
gaaattaccacagcttgtacctacaagaaccaggaatgccgtttgacaatccactatgag
aatggcttttctatcagcactgagccccaggaaggtgttttccccaagactatcctccaa
tctccttatgaaaagctgaaaatgtcctcagatgatgggatcagaatgctgtatttagat
tttggaggcaaagatggagagattcaactggaccttcattcctgccccaagccaattgtt
ttcatcattcattctttcctgtcagctaagataacaagactgggcctggtggcctga
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