Suncus etruscus (white-toothed pygmy shrew): 126009348
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Entry
126009348 CDS
T09902
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03018
RNA degradation
setr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126009348
09123 Folding, sorting and degradation
03018 RNA degradation
126009348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126009348
03041 Spliceosome [BR:
setr03041
]
126009348
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126009348
mRNA degradation factors
5'-3' decay
Lsm complex
126009348
Spliceosome [BR:
setr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
126009348
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM12_LSM
LSM14
Motif
Other DBs
NCBI-GeneID:
126009348
NCBI-ProteinID:
XP_049629724
LinkDB
All DBs
Position
5:84719744..84720122
Genome browser
AA seq
91 aa
AA seq
DB search
MAASATTNPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEIT
PEGRRITKLDQILLNGNNITMLVPGGEGPEV
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcggctagcgctaccaccaacccttcgcagttgcttcctctagagcttgtggacaaa
tgtataggatccagaattcacattgtgatgaagagtgataaggaaatcgttggcacactt
ctaggatttgatgactttgtcaatatggtattggaagatgtcactgaatttgaaattaca
ccagaaggaagaagaattactaaattagatcagattttgctaaatggaaataacataaca
atgctagttcctggaggagaaggacctgaagtttga
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