KEGG   Suncus etruscus (white-toothed pygmy shrew): 126009357
Entry
126009357         CDS       T09902                                 
Symbol
APTX
Name
(RefSeq) aprataxin
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:setr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    126009357 (APTX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:setr03400]
    126009357 (APTX)
Enzymes [BR:setr01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     126009357 (APTX)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     126009357 (APTX)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     126009357 (APTX)
DNA repair and recombination proteins [BR:setr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     126009357 (APTX)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     126009357 (APTX)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA Glycoamylase MARCKS
Other DBs
NCBI-GeneID: 126009357
NCBI-ProteinID: XP_049629730
LinkDB
Position
1:complement(59220385..59236327)
AA seq 339 aa
MQVCWLVRQDNWHQRIKLPHLEVIVLGRSPETKITDKKCSRQQVQLKAECNKGYVKVKQV
GINPTSIDSVIIGKDQEMKLRPGQVLYMVNELYPYTVEFKEESSPVRPSKRKKSGNSDFV
ESNAAQDTEPGTRMESGIHPSQCSVPPKKSKDDASTKKESLGHWSQGLKISMQDPKMQVY
KDEQVVVIKDKYPKARYHWLVLPWASISSLKVVSREHLQLLKHMHTVGEQMIANHTGSSK
LRFRLGYHAIPSMSQIHLHVISQDFDSPCLKNKKHWNSFNTEYFLESQAVMDMVQESGRV
TVRDGTSELLKLPLHCHECQQLLPSIPQLKEHLKKHWSE
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgcaggtgtgctggttggtgagacaggacaattggcaccaacgaatcaagcttccccat
ctggaagtgattgtgcttgggcgcagcccagagaccaagatcacagacaagaaatgttcc
cgccaacaagtccaattgaaagcagaatgtaataagggctatgtcaaggtgaagcaggta
ggaatcaatcccaccagcattgactcagtcataattgggaaggaccaagaaatgaagcta
aggcctggccaggttctctacatggtgaatgaactttatccatatactgtagagtttaag
gaagagtcaagtccagtgagacccagtaagagaaagaagtcaggcaacagtgattttgta
gaaagtaatgctgctcaggatactgagcctgggacaagaatggaatctgggatccatcct
agccaatgctctgtgcccccaaagaagagcaaagatgatgcatctaccaaaaaggaatca
ctgggccactggagccaaggcttgaagatttctatgcaggatcccaaaatgcaggtttac
aaagatgagcaggtggtggtgatcaaggataagtatcccaaggctcgttaccactggctg
gtcctaccgtgggcctctatttccagtctgaaggtggtgagcagggaacatcttcagctc
ctcaaacacatgcacactgtgggggaacagatgattgcaaatcacactggctccagtaag
ctccgtttccgattgggttaccatgccattcccagtatgagccaaatacatctacatgta
atcagccaggattttgattctccttgtcttaaaaacaaaaagcattggaattctttcaac
acagaatacttcctagaatcacaagctgtgatggacatggtacaggaatctggcagagtg
acagttcgagatggaacatctgagctcttgaagctgcctctccattgtcatgagtgccag
cagctgctaccttccattcctcaactgaaagagcatctcaagaagcactggtcagagtga

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