Suncus etruscus (white-toothed pygmy shrew): 126009422
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Entry
126009422 CDS
T09902
Symbol
UBR5
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126009422 (UBR5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
126009422 (UBR5)
Enzymes [BR:
setr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
126009422 (UBR5)
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
HECT type E3
126009422 (UBR5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
MLLE
zf-UBR
Motif
Other DBs
NCBI-GeneID:
126009422
NCBI-ProteinID:
XP_049629780
LinkDB
All DBs
Position
5:149836328..149956993
Genome browser
AA seq
2792 aa
AA seq
DB search
MTSIHFVVHPLPGTEDQLNDRLREVSEKLNKYNLNSHPPLNVLEQATIKQCVVGPNHAAF
LLEDGRVCRIGFSVQPDRLELGKPDNNDGSKLNSNSGAGRTSRPGRTSDSPWFLSGSETL
GRLAGNTLGSRWSSGVGGSGGGSSGRSSAGARDSRRQTRVIRTGRDRGSGLLGSQPQPVI
PASVIPEELISQAQVVLQGKSRSVIIRELQRTNLDVNLAVNNLLSRDDEDGDDGDDTASE
SYLPGEDLMSLLDADIHSAHPSVIIDADAMFSEDISYFGYPSFRRSSLSRLGSSRERDSE
LLRERESVLRLRERRWLDGASFDTERGSTSKEGEPNADKKSAPAQSPVSLGEDLQWWPDK
DGTKFTCIGALYSELLAVSSKGELYQWKWSELEPYRNAQNPSLHHPRATFLGLTNEKIVL
LSANSIRATVATENNKVATWVDETLSSVASKLEHTAQTYSELQGERIVSLHCCALYTCAQ
LENNLYWWGVVPFSQRKKMLEKARAKNKKPKSSAGISSMPNITVGTQVCLRNNPLYHAGA
VAFSISAGIPKVGVLMESVWNMNDSCRFQLRSPESLKSMDKASKTAEAKPESKQEPVKTE
MGPPPSPASTCSDASSIASSASMPYKRRRSTPAPKEEEKVNEEQWSLREVVFVEDVKNVP
VGKVLKVDGAYVAVKFPGTSSNTSCQSSCGSDADPSSLLQDCRLLRIDELQVVKSGGTPK
VPDCFQRTPKKLCIPEKTEILAVNVDSKGVHAVLKTGNWVRYCIFDLATGKAEQENNFPT
SSIAFLGQNERNVAIFTAGQESPIILRDGNGTIYPMAKDCMGGIRDPDWLDLPPISSLGM
GVHSLINLPANSTIKKKAAIIIMAVEKQTLMQHILRCDYEACRQYLMNLEQAVVLEQNLQ
VLQTFISHRCDGNRNILHACVSVCFPTSNKETKEEEEAERSERNTFAERLSAVEAIANAI
SVVSSNGPGNRAGSSSSRSLRLREMMRRSLRAAGLGRHEAGSSSSDHQDPVSPPIAPPSW
VPDPPAMDPDGDIDFILAPAVGSLTTAATGTTQGPSTSTIPGPSTEPSVVESKDRKANAH
FILKLLCDSVVLQPYLRELLSAKDARGMTPFMSAVSGRAYPAAITILETAQKIAKAEVSS
SEKEEEVFMGMVCPPGTNPDDSPLYVLCCNDTCSFTWTGAEHINQDIFECRTCGLLESLC
CCTECARVCHKGHDCKLKRTSPTAYCDCWEKCKCKTLIAGQKSARLDLLYRLLTATNLVT
LPNSRGEHLLLFLVQTVARQTVEHCQYRPPRIREDRNRKTANPEDSDMPDHDLEPPRFAQ
LALERVLQDWNALKSMIMFGSQENKDPLSASSRIGHLLPEEQVYLNQQSGTIRLDCFTHC
LIVKCTADILLLDTLLGTLVKELQNKYTPGRREEAIAVTMRFLRSVARVFVILSVEMASS
KKKNNFIPQPIGKCKRVFQALLPYAVEELCNVAESLIVPVRMGIARPTAPFTLASTSIDA
MQGSEELFSVEPLPPRTSSDQSSSSSQSQSSYIIRNPQQRRISQSQPVRGRDEEQDDIVS
ADVEEVEVVEGVAGEEDHHDEQEEHGEENAEAEGQHDEHDEDGSDMELDLLAAAETESDS
ESNHSNQDNASGRRSVVTAATAGSEAGASSVPAFFSEDDSQSNDSSDSDSSSSQSDDIEQ
ETFMLDEPLERTTSSSHASGAAQAPRSMQWAVRSAQHQRAASTAPSSTSTPAGNSAGLIY
IDPSNLRRSGTISTSAAAAAAALEASNASSYLTSASSLARAYSIVIRQISDLMGLIPKYN
HLVYSQIPAAVKLTYQDAVNLQNYVEEKLIPTWNWMVSIMDSTEAQLRYGSALASAGDPG
HPNHPLHASQNSARRERMTAREEASLRTLEGRRRATLLSARQGMLSARGDFLNYALSLMR
SHNDEHSDVLPVLDVCSLKHVAYVFQALIYWIKAMNQQTTLDTPQLERKRTRELLELGID
NEDSEHENDDDTNQSATLNDKDDESLPAETGQNHPFFRRSDSMTFLGCIPPNPFEVPLAE
AIPLADQPHLLQPNARKEDLFGRPSQGLYSSSAISGKCLMEVTVDRNCLEVLPTKMSYAA
NLKNVMNMQTRQKKEGEEPSLLPEEAESSKPGPSAHDLAAQLKSSLLAEIGLTESEGPPL
TSFRPQCSFMGMVISHDMLLGRWRLSLELFGRVFMEDVGAEPGSILTELGGFEVKESKFR
REMEKLRNQQSRDLSLEVDRDRDLLIQQTMRQLNNHFGRRCATTPMAVHRVKVTFKDEPG
EGSGVARSFYTAIAQAFLSNEKLPNLDCIQNANKGTHTSLMQRLRNRGERDREREREREM
RRSSGLRAGSRRDRDRDFRRQLSIDTRPFRPASEGNPSDDPDPLPAHRQALGERLYPRVQ
AMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVDEAMELIIAHGRENGADSILDLGL
LDSSEKVQENRKRHGSSRSVVDMDLDDTDDGDDNAPLFYQPGKRGFYTPRPGKNTEARLN
CFRNIGRILGLCLLQNELCPITLNRHVIKVLLGRKVNWHDFAFFDPVMYESLRQLILASQ
SSDADAVFSAMDLAFAIDLCKEEGGGQVELIPNGVNIPVTPQNVYEYVRKYAEHRMLVVA
EQPLHAMRKGLLDVLPKNSLEDLTAEDFRLLVNGCGEVNVQMLISFTSFNDESGENAEKL
LQFKRWFWSIVEKMSMTERQDLVYFWTSSPSLPASEEGFQPMPSITIRPPDDQHLPTANT
CISRLYVPLYSSKQILKQKLLLAIKTKNFGFV
NT seq
8379 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccatccacttcgtggtccacccgctgcccggcaccgaggaccagctcaatgac
aggttacgggaagtttcagagaagttgaacaagtacaatttaaatagccatccccctttg
aatgtgttggaacaggctactatcaaacagtgtgtggtgggaccgaatcatgctgctttt
cttcttgaggatggtagagtttgcaggattggcttttcagtacaaccagacagattagag
ttgggaaaacctgataacaatgacgggtcaaagctgaacagcaactcgggggcagggagg
acatcgaggcctgggaggaccagtgactccccgtggtttctgtccggctcggaaactctg
ggcaggctggctggcaatactctgggaagccgctggagctctggagtaggaggcagtgga
ggaggatcctccggtaggtcatcagctggagctcgggattcccgccgccagacacgagtt
attcggacaggccgagaccgaggctctgggctcctgggcagtcagccgcagcccgtcatc
cctgcatctgtcatccctgaggagctcatttctcaggcccaagttgttttacaaggcaag
tccaggagtgtcattatccgggaactccagcgaacaaaccttgacgtgaaccttgctgtc
aataacctgcttagccgggatgatgaagacggcgatgatggggacgacaccgctagtgaa
tcctacttgcccggagaggaccttatgtctcttttggatgccgacattcattctgcccac
cctagtgtcattattgatgctgatgccatgttctctgaggacatcagttactttggttac
ccttcttttcggcgctcatcactctccaggctaggctcctctcgagagagagactctgag
ctgttgcgtgaacgtgagtctgttttacgtttacgtgaacgaaggtggcttgatggagcc
tcatttgatactgaaaggggctccaccagcaaagaaggagagccgaacgctgacaagaag
agtgcgcctgctcagagccctgtgtccctgggggaggatctgcagtggtggcctgacaag
gatggtacaaaattcacgtgcattggggctctgtattctgagctcctggctgtgagcagt
aaaggagaactttatcagtggaagtggagtgaattggaaccgtacagaaatgcacagaat
ccttcattacatcacccacgagcaacatttttgggactaaccaatgaaaagatagtcctc
ctgtctgcaaatagcattagagcaactgtagctacagaaaacaacaaggttgctacctgg
gtagatgaaactttaagttctgtggcttctaagttagagcacactgcccaaacttactca
gaacttcaaggagaaaggattgtttctttacactgctgtgccctttatacctgcgcccag
ctagaaaacaatttatactggtggggtgttgttccttttagtcaaaggaaaaaaatgtta
gagaaagcaagagccaaaaataaaaagcccaagtctagtgctggcatctcttccatgcca
aacatcacggttggaacccaggtctgcttaagaaataatcccctctatcatgccggagca
gttgccttttccattagtgcaggaattcctaaagttggtgtcttaatggagtctgtgtgg
aatatgaatgacagctgtaggtttcagctccgatctcccgagagcttgaaaagcatggac
aaagcaagcaaaacagctgaagctaagcctgaaagtaagcaggagccagtgaaaacagag
atggggcctccaccgtcacctgcatccacttgcagtgatgcctcctctattgccagcagc
gcctccatgccctataaacggcgccggtcaacccctgcccccaaagaggaggagaaggtg
aatgaagagcagtggtctcttcgggaagtcgtgtttgtggaagatgtcaagaatgtcccc
gttggcaaggtgctgaaagtggatggtgcttacgttgccgtcaagttcccaggaacatcc
agtaacaccagttgtcagagcagctgtggctctgatgctgacccttcctccctgctgcag
gattgtaggttgcttcgaatcgatgagttgcaggttgtaaaatctgggggaacgcctaaa
gttcccgattgcttccaaaggacccctaagaagctctgcattcctgaaaaaactgaaata
ctagcagtgaatgtggattccaaaggtgtgcatgctgtcctgaagactggaaactgggtt
cggtactgtatctttgatcttgctacaggaaaagcagaacaggaaaataattttcctaca
agcagcattgctttccttggtcagaatgaacggaatgtagccatcttcacagctggacag
gagtctcctattattcttcgagatgggaatggtaccatttatccaatggccaaagattgc
atgggaggaataagggatcctgattggcttgatcttccacctattagtagtcttggaatg
ggtgtccactctttaattaaccttcctgccaattccacaatcaaaaagaaagctgctatt
atcatcatggctgtagagaaacaaaccttaatgcaacatattctacgctgtgactacgag
gcctgccgacagtaccttatgaatcttgaacaagcagtggttttagagcagaatctccag
gtgctacagacgtttatcagccacagatgtgatggaaatcgaaatattttgcatgcgtgt
gtgtctgtgtgctttccaaccagcaacaaggaaacaaaagaagaggaggaagcagagcgc
tccgagaggaacacatttgcggagcggctttccgccgtggaggccattgcaaatgccatc
tctgttgtctccagtaatggcccaggtaaccgggctggatcttcaagtagccgaagcctg
agactacgggagatgatgaggcggtccttgagagcggctggcttgggcagacatgaagct
ggctcttcatcaagtgaccaccaggatccagtgtcgcctcccattgcaccccctagttgg
gttcctgaccctcctgcaatggatcctgatggtgacatcgacttcatcttggcccctgct
gtgggatccctgaccactgcagccactggtaccacacaaggacccagcacttctaccatt
ccaggtccttccacagagccctcagtagttgagtccaaggaccggaaggccaacgctcat
tttatattaaagttgctgtgtgacagtgtggttctgcagccttatctccgcgagctcctt
tccgccaaggatgcaagagggatgaccccatttatgtcggctgtaagtggtcgcgcttac
cctgccgcaataaccatcttagaaacagctcagaaaattgccaaagctgaagtgtcatcg
agtgagaaggaggaagaagtatttatgggaatggtctgcccaccaggcaccaaccccgat
gactcgcctttgtatgttttatgctgtaatgacacctgcagtttcacttggactggggca
gagcacatcaatcaggatatttttgagtgtcgaacctgtggcttgctggagtccttatgt
tgctgtaccgaatgtgccagggtttgtcataaaggccatgactgcaaattaaaacggact
tcgcctacagcctattgtgattgttgggagaaatgcaaatgtaagactttgatagctgga
cagaaatctgctcgtctggatctgctgtatcgtctgctcactgcaaccaacctggtcacc
ctgccaaacagcagaggggagcacctcctgctatttctggtacagacagtggcgaggcaa
acagtagagcactgccagtatagacctcctcggatacgggaggatcgcaaccggaagacc
gctaatcccgaagattcagatatgcctgatcatgacctggagccaccgaggttcgcccag
cttgccttggaacgggtcctccaggactggaatgctttgaaatccatgatcatgttcggc
tcgcaggagaataaggaccctctcagtgccagcagtaggatagggcaccttctgccagag
gagcaagtgtacctgaaccagcagagcggcaccatcaggctggactgcttcacgcactgt
ctcattgtcaaatgcacagcagatattttgctcctagatactctcctggggacacttgtc
aaagagctgcagaacaaatatactcctgggcgcagagaagaagctattgctgtcaccatg
cggtttctgcgctctgtggccagagtctttgtcattctcagtgtggaaatggcttcgtcc
aaaaagaaaaacaacttcatcccacagcccattgggaaatgcaagcgcgtgttccaggcc
ctgctcccctatgctgtggaagagctgtgcaatgtggccgagtcactcattgtgcctgtg
cggatgggcatagcacgccccacggcgcccttcaccttagcgagcacgagcatcgacgcc
atgcagggcagtgaggagctcttttctgtggagcctctgccgccgcgcacatcctcggat
cagtccagcagctccagccagtcccagtcgtcctacatcatcaggaatccgcagcagcgg
cgcatcagccagtcgcagcccgttcggggccgggatgaagagcaggatgacatagtttca
gcagatgtggaagaggtcgaggtggtggagggtgttgctggagaggaggaccatcacgac
gagcaggaggagcatggagaagaaaatgctgaggcagagggacagcatgatgagcatgat
gaggacgggagtgacatggagttggacttactagctgcagcagaaacagaaagtgacagt
gaaagtaaccatagcaaccaagataacgctagtgggcgcagaagtgtggtgactgcggca
actgcaggctcggaagcaggtgctagcagtgtgcctgccttcttctctgaggatgactcg
cagtccaatgactcaagtgactccgacagcagtagcagccagagtgatgacatagagcag
gagaccttcatgctggacgagccactggaaaggacaacaagcagctcacatgccagtggc
gctgcccaagccccgcgctccatgcagtgggcagtccgcagcgcccagcaccagcgggct
gccagcaccgctccttccagcacatctacgccggcaggcaattcagcggggctgatttat
attgatccttcaaacttacgccggagtggcaccataagcaccagtgcagccgctgcagct
gcagcactggaagccagcaatgccagcagctatttgacctctgcaagcagtttggcgagg
gcctacagcatcgtcatccggcagatctcggacttgatgggcctgatcccaaagtataac
caccttgtgtactcgcagattcctgcagctgtgaagctgacgtaccaagatgcagtgaac
ttacagaactatgtagaagaaaagcttattcccacttggaactggatggtcagtattatg
gattctactgaagctcaattacgttatggttctgcattagcatctgctggtgatcccgga
cacccaaaccatcctcttcatgcatctcagaattcagcgcggagggagaggatgactgca
cgggaagaggctagcttacgaactctggaagggagacgccgcgccacgctgctgagtgcc
aggcaaggaatgctgtctgctcgaggggacttcctcaattatgctctgtctttaatgcgt
tcacacaatgatgaacattcagatgttcttccggtgctggatgtgtgctccctgaagcac
gtggcatatgttttccaagctcttatatattggattaaagcaatgaatcagcagacaaca
ttggatacaccccaactggaacgcaaaaggactcgagaactcttggaactgggcattgat
aatgaagattcagaacatgaaaatgatgatgacaccaatcaaagtgcgactttgaatgat
aaggatgatgagtctcttcctgcagaaactggccaaaaccacccatttttccgtcgctca
gactccatgacgttccttgggtgcatacccccaaatccctttgaagtgcctctggctgaa
gccattcccttggcggaccagcctcatctgttgcagccaaatgctaggaaggaggatctt
tttggccggccaagtcagggtctttattcttcatctgccattagtgggaagtgcttaatg
gaggtcacagtggatagaaactgcttggaggttcttccaactaaaatgtcttatgctgct
aatctgaaaaacgtaatgaatatgcaaactcggcaaaaaaaggaaggggaagaaccaagt
ctgctgcctgaagaagcagagagttcaaagccagggccttctgctcacgatcttgctgct
cagctcaagagtagtttgctggccgagataggactgacagagagcgaagggccaccactg
acatccttcaggccccagtgtagtttcatgggaatggttatttcccacgacatgctgtta
ggacgctggcgcctttccttagaactgtttggcagagtattcatggaggatgttggagca
gagcctggatcaatcctaactgaattgggtggttttgaggtaaaagaatcaaaattccgt
agagaaatggaaaaactgagaaaccagcagtcaagagatttatcactagaggtcgatcgt
gatcgagaccttcttattcagcagaccatgagacaacttaacaatcactttggccgaaga
tgtgctaccactccaatggctgtacacagagtaaaagtcacatttaaggacgagccagga
gagggcagtggtgttgcacgaagtttttatacagccattgcacaagcatttttgtcaaat
gaaaaattgccaaatctagattgtattcaaaatgccaacaagggcacccatacaagttta
atgcaaagattaaggaacaggggagagagggatcgggaaagggagagagagagggaaatg
aggcggagtagtggcctgcgagcaggttctcggagagatcgggacagagactttcgaaga
cagctttccatcgacactcggccattcagacctgcctctgaggggaacccgagcgacgat
cccgatcctctgcctgcccaccgacaggctctcggagaaaggctctaccctcgtgtccag
gcaatgcagccagcctttgcaagtaaaatcacgggcatgttgttggagctatctccggcc
caactgcttctcctcctagcaagcgaagattctctgcgagcaagagtggatgaggccatg
gagctcatcattgcccatggacgggaaaatggagcagatagtatcttggatcttgggtta
ttagattcctcagagaaggtacaggaaaaccgaaagcgccatggctcaagtcgcagtgtc
gtggacatggatttggatgatacggacgatggggatgataatgcacctttgttttaccaa
cctggtaaaagaggcttttatacccctaggccgggcaaaaacacagaggcgaggctgaac
tgtttccgaaacattggcaggattcttggactatgtctgttacagaatgaactgtgtcct
atcacactgaatagacatgtgattaaagtgttgcttggtagaaaagtcaattggcatgat
tttgccttttttgatcctgtgatgtatgagagtttgcggcaacttatcctggcttcccag
agttctgatgccgatgctgttttctctgcaatggacttagcgtttgccattgatctgtgt
aaagaagagggtggagggcaggttgaacttattcctaatggcgtcaacatcccagtcact
ccccagaatgtgtacgagtatgttcggaaatatgcagagcacagaatgctggtagttgca
gaacagccattacatgcaatgaggaagggtctactggatgtgcttccaaaaaactcatta
gaagacctgacagcagaagactttaggcttctggtgaacggctgtggtgaagttaatgtg
cagatgctgatcagtttcacctctttcaacgatgaatcaggagaaaatgctgaaaagctt
ttgcagtttaagcgttggttttggtcaatagtagagaagatgagcatgacggaacggcaa
gatcttgtttacttttggacatcaagcccatcattaccagccagcgaagaaggatttcag
cctatgccctccatcacaataagaccgccagatgaccaacatcttcctactgcaaatact
tgtatttctcgactttacgtcccactctattcctctaaacagattctcaaacagaaattg
ctactcgccataaagaccaaaaattttggttttgtgtag
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integrated database retrieval system
