Suncus etruscus (white-toothed pygmy shrew): 126009433
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Entry
126009433 CDS
T09902
Symbol
LRP12
Name
(RefSeq) low-density lipoprotein receptor-related protein 12
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126009433 (LRP12)
Membrane trafficking [BR:
setr04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
126009433 (LRP12)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
Ldl_recept_a
Motif
Other DBs
NCBI-GeneID:
126009433
NCBI-ProteinID:
XP_049629823
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Position
5:148157765..148246849
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AA seq
904 aa
AA seq
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MARRRSTKANACPGPWRSARLWLLLLLALADGNGAFAEHSENVHISGVSTACGETPEQIR
APSGVITSPGWPSAYPARINCSWLIRANPGEIITISFQDFDIQGSRRCSLDWLTIEMYKD
VESYRACGSTIPPPYISSQDHVWIRFHSDDTVSKKGFRLAYFSGKAAEPRCACDQFRCAN
AKCIPEAWRCNGMDECGDRSDEAACSGSSRAATGVSGAVVAAEPPSAAAAFQPCAYNQFQ
CLSRFTKVYTCLPEALRCDGNIDCLDLGDELDCAVPACGRWLRYFYGTFSSPNYPDFYPP
GSNCTWLIDTGDRRKVLLRFTDFKLDGTASGDFVKVYDGLDENPRRLLRVLTAFDAHAPL
TVVSSSGQVRVHFCADKVNAARGFNATYQVDGFCLPWEIPCGGNWGCYTEPQRCDGYWHC
PNGRDEGNCSACQKEEFPCSRNGVCYPRSDRCNYQNHCPNGSDEKNCFFCQPGNFHCKNN
RCVFESWVCDSQDDCGDGSDEENCPVIVPTRVITAAVIGSLICGLLLVIALGCTCKLYSL
RMFERRSFETQLSRVEAELLRREAPPSYGQLIAQGLIPPVEDFPVCSPNQASVLENLRLA
VRSQLGFTSIRLPMGGRSSTLWNRIFSFARSRHSGSLALVSADGDEVAAGPGAGRDAERG
HAHRGLFSVESDEADTEHERRDAAGAAGGVAAPLPQKVAPTAAVEVATVGAGGPASTPSA
RNGPRESRRGEAGTAAPSSAGAGAGAAAGPATTASPGTEHPSVSPARHQLSSALSRVTQG
LRWVRFTLGRASPVAAATQSHSPLRQLDTGGHGRGDDDDDVELLIPVADGPSEPEAHGDC
ARPLLDLAATGTATAGVPQHQHPGARPDGPCDHCGIVHTAQIPDSCLHSGPKSEPSDDEA
LLLC
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtcgccggagcacaaaagccaacgcgtgcccagggccctggagatccgcgcgg
ctctggctgcttctcctcctggccctagcggacggaaacggtgcttttgcagaacattcg
gaaaatgtgcatatttcaggagtgtcaactgcgtgtggagagactcccgaacaaatccga
gcacctagtggggtcatcactagcccaggctggccctctgcgtaccctgctaggatcaac
tgtagctggctcatcagggcaaatccgggggagatcatcaccatcagcttccaggatttt
gacattcagggctcccgtcgatgcagcttggactggctgactatcgaaatgtacaaagac
gttgagagctaccgcgcctgcggctccaccatcccgccgccctacatttcttcccaagac
cacgtctggatcaggttccattcagacgacacagtctccaagaagggcttccggctggca
tacttctcagggaaagccgcggagccccgctgcgcctgcgaccagttccgctgcgccaac
gccaagtgcatccccgaggcctggcggtgcaatggcatggacgagtgcggggaccgctcg
gacgaggcggcgtgcagcgggagtagccgggctgcgacgggggtgtccggggctgtcgtg
gcagccgagccccccagcgcagccgccgccttccagccgtgcgcctacaaccagttccag
tgcctgtcgcgcttcaccaaggtgtacacctgcctgcccgaggcgctgcgctgcgacggc
aacatcgactgcctggacctgggcgacgagctggactgcgccgtgcccgcgtgcggccgc
tggttgcgctatttctacggcaccttcagctcgcccaactaccccgatttctacccgccg
gggtccaactgcacctggctcatcgacaccggcgaccggcgcaaggtgctgctgcgcttc
accgacttcaagctggacggcacggcgtcgggcgacttcgtcaaggtgtacgacgggctg
gacgagaacccgcggcgcctgctgcgggtgctcacggccttcgacgcccacgcgcccctc
accgtggtgtcctcgtcgggccaggtgcgcgtgcacttctgcgccgacaaggtgaacgcg
gcgcgcggcttcaacgccacctaccaggtggacggcttctgcctgccctgggagatcccc
tgcgggggcaactggggctgctacacggagccgcagcgctgcgacggctactggcactgc
cccaacggccgcgacgagggcaactgctcggcctgccagaaggaggagttcccctgctcg
cgcaacggcgtctgctacccgcgctccgaccgctgcaactaccagaaccactgccccaac
ggctcggacgagaagaactgcttcttctgccagccgggcaacttccactgcaagaacaac
cgctgcgtgttcgagagctgggtgtgcgactcgcaggacgactgcggcgacggcagcgac
gaggagaactgcccggtcatcgtgcccacgcgggtcatcacggcggctgtcatcggcagc
ctcatctgcggcctgctgctggtcatcgcgctcggctgtacctgcaagctctactcgctg
cgcatgttcgagcgcaggtcatttgaaacccagctgtcaagagtagaagctgaattgtta
agaagagaagctcctccttcctatggacaattgattgctcagggcttaattccacctgtg
gaagattttcctgtttgttcgcctaaccaggcctccgtgctggagaacctgcggctcgcg
gtgcgttcgcagctgggcttcacgtccatccggctgcccatggggggccgctccagcacc
ctctggaaccgcatcttcagcttcgcgcgctcgcgccactcgggctcgctggccctggtc
tcggccgacggggacgaggtggcggccgggccgggcgctggccgggacgccgagcggggc
cacgcgcaccgcggcttgttctccgtggagtccgacgaggccgacacggagcacgagcgg
agggatgcggccggggcggccggcggggtggccgctccgctgccccagaaagtggccccc
acggcggccgtggaggtggccacggtgggagccggcggccccgcgtccacccccagcgcc
cgcaacgggccccgggagagccgccggggggaggccgggacagcggctccgtcttctgca
ggagcaggtgcaggtgcagcagccgggcctgcaaccaccgcctccccgggcacggagcac
ccgagcgtgagtcccgcgcgccaccagctcagcagcgcgctcagccgcgtgactcaaggg
ctgcgctgggtgcgtttcaccctgggccgcgccagccccgtggccgccgccacccagagc
cacagccccctgagacagctggacactggggggcacggccggggagacgacgacgacgac
gtggagctgctcatccccgtcgccgacggcccgtcggaaccggaggcgcacggcgattgc
gcacggccactcctggacctggcggccacgggcacggccaccgccggggtaccgcagcat
cagcaccccggggcccggcccgacggcccctgtgaccactgcggcatcgtgcacacggcg
cagatccccgactcctgcctgcacagcggccccaagagcgagcccagcgacgacgaggct
ttgttactgtgctga
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