Suncus etruscus (white-toothed pygmy shrew): 126009456
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Entry
126009456 CDS
T09902
Symbol
DCAF13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
setr03009
]
126009456 (DCAF13)
04121 Ubiquitin system [BR:
setr04121
]
126009456 (DCAF13)
Ribosome biogenesis [BR:
setr03009
]
Eukaryotic type
90S particles
Other 90S particles
126009456 (DCAF13)
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
126009456 (DCAF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WD40_RFWD3
MIOS_WD40
Beta-prop_IFT122_1st
eIF2A
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
KNTC1_N
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
WAC_Acf1_DNA_bd
Motif
Other DBs
NCBI-GeneID:
126009456
NCBI-ProteinID:
XP_049629861
LinkDB
All DBs
Position
5:complement(149074286..149102846)
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AA seq
445 aa
AA seq
DB search
MKVKMLSRNPDDYVRETKLDLQRVPRNYDPALHPFEVPREYVRALNATKLERVFAKPFLA
SLDGHRDGVNCLAKHPKSLATVLSGACDGEASIWNLTKRTCIRTVQAHEGFVRGICTRFC
GSSFFTVGDDKTVKQWKMDGPDSGEEDEPLHTILGKTVYTGIDHHWKDAIFATCGQQVDI
WDEHRTNPVCSMTWGFDSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLKKVILDMR
TNTICWNPMEAFVFTAANEDYNLYTFDMRALDSPMMVHMDHVSAVLDVDYSPTGKDFVSA
SFDKSIRIFPVDKSRSREVYHTKRMQHVICVKWTSDSKYIMCGSDEMNIRLWKANASEKL
GVLTSREKAAQDYNQKLKEKFQHYPQIKRIARHRHLPKSIYSQIQEQRVMKEARRRKEVN
RRKHSKPGSVPIVSEKKKHIVAVVK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaagatgctgagcaggaatccggacgactatgtccgcgagaccaagttggac
ttacagagagtccccagaaactacgacccagccttacatccttttgaggtcccacgcgaa
tatgtcagagcactaaatgccaccaagttggaacgggtgttcgccaaaccattccttgct
tctctggatggacaccgagatggagtcaactgcttagcaaagcaccccaaaagcctggct
accgtcctttcgggagcttgcgatggagaggcaagtatttggaacttgactaaacggaca
tgtattcgtacagtacaagcacatgaaggttttgtgcgaggaatatgtactcgattttgt
gggtcttctttttttacggttggtgatgacaaaactgtgaagcaatggaagatggatggg
cctgactctggagaagaagatgaaccattacatacaatattaggaaagactgtttacaca
ggaattgaccatcactggaaagatgccatttttgccacgtgtgggcagcaagtggacatt
tgggacgagcacagaacgaatcctgtttgttcaatgacctggggatttgacagtataagt
agtgtcaaattcaacccaattgagacatttctcttgggaagttgtgcctctgacaggaat
atagtattatatgacatgaggcaagcgactccactgaaaaaggtcatcttagatatgaga
acaaacacaatttgttggaaccctatggaagcttttgttttcactgcagcaaatgaagat
tacaacctgtatacttttgacatgcgtgccctggactctcccatgatggtgcacatggac
cacgtgtctgccgtgctggatgtggattactcacccaccgggaaggactttgtgtctgcg
agttttgataaatccatccgcatcttcccagtggataaaagtcggagcagggaagtctac
cacacaaagagaatgcagcatgtcatctgtgtcaagtggacctctgacagcaagtacatc
atgtgtggctccgatgagatgaacattcgcctatggaaagccaatgcttcagaaaaactg
ggagtgctcacgtcacgagaaaaagcagcccaagactataaccaaaagctaaaggagaaa
tttcagcactatcctcaaataaaacggatcgcccggcaccgacacctccccaaatccatc
tacagccagatccaggagcagcgggtgatgaaggaggctcggcgtaggaaggaggtgaat
cgtcgcaaacatagcaagccaggatcggtgccaattgtgtcagagaagaagaagcacatc
gtggcagtcgtaaaataa
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