Suncus etruscus (white-toothed pygmy shrew): 126009515
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Entry
126009515 CDS
T09902
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 59-like
KO
K12028
tripartite motif-containing protein 59
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
126009515
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
126009515
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
RING_XB3-XBAT31
ArAE_2
zf-C3HC4_4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
126009515
NCBI-ProteinID:
XP_049629926
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Position
5:complement(32481197..32482384)
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AA seq
395 aa
AA seq
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MHNFKDELTWPICYRIFEDSCVLPCSHTFCKTCLESILQASCNFYIGRPLQIPLKCPNCR
SMIEVTPWGIDSLPVNFALRGIIEKYQQEDHPEIATCPEHYMQLLSVYCLLDMKLICGHC
LTMGQHKDHPIDGLNRAYLKEMEALKILLQQLSDVHWTDLSHLIQKLEEEKLNLERMVQG
DKGVVLQYFKELSDVLEQKKKLFLTALCDVSKRIHQVYMPQIERMKELQEQQLELIALAT
SLQKESPLEFLEKVDDVRQRIQMLKQKPLPQILPVHIHPRAIQVLKEDWSRTEIKQIKQL
LIPKIKIEKDDNDKEAELFKILNIVIVTMILVILLSVLCFNQHIITILNXITSLYFSKVS
LSVYQIVSNSLHDVKNIVCHILYLPTEFTWKPVFC
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcacaattttaaggatgagttaacatggcccatttgttacagaatttttgaagactct
tgtgtgctgccatgctctcacacattctgtaaaacttgcttagaaagcattcttcaggca
tcatgtaacttttacatagggaggcctttgcagatcccactcaagtgccctaactgcaga
agcatgattgaggttactccttggggcatagactctttaccggtcaattttgcattaagg
ggtattatcgaaaagtaccagcaagaagatcacccggaaattgccacctgccctgaacac
tacatgcaactattaagtgtttactgtctgctggatatgaagctgatctgtgggcattgc
cttactatgggccagcataaggaccacccaatagatggcctcaaccgcgcctacctcaag
gagatggaagcactgaagatattgcttcagcagttgagtgatgttcactggacagacctc
agccatctgattcagaagcttgaagaagagaaattgaacttggagaggatggtccaaggg
gataagggagtcgttcttcagtacttcaaggagcttagtgatgtattggaacagaagaaa
aagctgttcctaactgccctttgtgatgtcagcaaaaggatccatcaggtatatatgccc
caaatcgaaagaatgaaagagttgcaagagcagcagcttgaattaatcgccctggcaaca
tctttacagaaagaaagtccccttgagtttcttgagaaagtagatgatgttcgccagagg
atccagatgctaaagcaaaaacccctaccccaaatcctgcctgtccatatccacccacga
gctatccaggtattgaaggaagattggagcagaacagaaattaagcaaatcaagcaactg
ctaattcccaaaataaagattgaaaaggatgacaatgacaaagaagctgaactttttaag
attctaaatattgttattgtcacaatgattttagtgatactgttatcagtcctctgtttt
aaccagcacataataaccattttaaattaaattacttcactgtatttctcgaaagtctct
ttatctgtttaccaaatcgtatcgaacagcctgcatgatgtaaagaatatcgtgtgtcac
attttatatttaccgacggaattcacatggaagccagttttttgttga
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