Suncus etruscus (white-toothed pygmy shrew): 126009519
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Entry
126009519 CDS
T09902
Symbol
TSC1
Name
(RefSeq) hamartin
KO
K07206
tuberous sclerosis 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04072
Phospholipase D signaling pathway
setr04140
Autophagy - animal
setr04150
mTOR signaling pathway
setr04151
PI3K-Akt signaling pathway
setr04152
AMPK signaling pathway
setr04211
Longevity regulating pathway
setr04218
Cellular senescence
setr04714
Thermogenesis
setr04910
Insulin signaling pathway
setr05163
Human cytomegalovirus infection
setr05165
Human papillomavirus infection
setr05168
Herpes simplex virus 1 infection
setr05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04072 Phospholipase D signaling pathway
126009519 (TSC1)
04151 PI3K-Akt signaling pathway
126009519 (TSC1)
04152 AMPK signaling pathway
126009519 (TSC1)
04150 mTOR signaling pathway
126009519 (TSC1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
126009519 (TSC1)
09143 Cell growth and death
04218 Cellular senescence
126009519 (TSC1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
126009519 (TSC1)
09149 Aging
04211 Longevity regulating pathway
126009519 (TSC1)
09159 Environmental adaptation
04714 Thermogenesis
126009519 (TSC1)
09160 Human Diseases
09161 Cancer: overview
05231 Choline metabolism in cancer
126009519 (TSC1)
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
126009519 (TSC1)
05163 Human cytomegalovirus infection
126009519 (TSC1)
05165 Human papillomavirus infection
126009519 (TSC1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hamartin
ATG16
Motif
Other DBs
NCBI-GeneID:
126009519
NCBI-ProteinID:
XP_049629944
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All DBs
Position
5:complement(19706071..19754800)
Genome browser
AA seq
1157 aa
AA seq
DB search
MAQQANIGELLAMLDSSVLSMREDVTAMFKENLSSDRGPMLVNALVDYYLESNSQSVLDI
LTTLQEPHDKHLLDKMNEYVGKATSRLSTLVLLGHVARLQPPWKHKLSQAPLLPSLLKCL
KVDTDVVVLTTGVLVLIILLPMIPQSGKQHLHDFFDIFGRLSSWCLKKPGHVTEVYLVHL
HASVYALFHRLYGMYPCNFVSFLRSHYSMKENLETFEEVVKPMMEHVRIHPELVTGSKDH
ELDPRRWKRLETHDVVIECAKISLDPAEASPEDGYSVSRSFTRLPHRTADPTASPYGDTP
NSYGSATSTPHSSRLTSSFSSPGQLPQTLTSAATRLGTEPPTQASLWSPSMVCGMTTPPT
SPGNVPPDAAHPYSKVFGTTGGKGTPLGTPATSPPPAPLGPPDDYMHSALPQAAATPSRK
EEKADAARPCLHRQQHLPNDRGTEELSGHQGSVPLSDLPGFLGDLASEEDSVEKDREEAA
ISKELSELTPADAEPLVPRGGFDSPFYPDRAPGCPRKVPSAASCAPSCSGNPEVLSCSLG
PDTPKQAFTPIERPFTGSREHPAASDTSILSPSPYQASPPRGLGFGRGQPPPYDHLFEAA
LPKTAHHFIREKTAQLSKTQKGSTDEALVPRSSPAEVLDRLIQQGADVHSKELSRLSLPT
KSVDWTHFGGSPPSDEIRTLRSQLLLLHNQLLYERFKRQQHALRNRRLLRKVIRAAALEE
HNAAMKDQLKLQEKELQLWKVSLQREQGRYSQLQEQRDTVVSHLHSQIRQLQQDREDFYS
QSQELQTKLEDCRNMISELRLELKKANSKVCHTELQLAQVSQKLSNSESVQQQMEFLNRQ
LLVLGEVNELYLEQLQSKHSDTAQEVEMMKAAYRKELEKHRSHLAQQSQRLDTSQKRVLE
LESHLAKKDHLLAEQKKYLEDIKAQARQQQQAAEGRYVAQKRITQAFELEILDLYGRLEK
AGLLPRQGQDPMEAAEVAEERLDGCTDDCLGSISGHGEEVSSLNGETKASRPGGGGNRGA
GGSSSGSSELLTPEKGPGLRAGPLGGRWDSAVGESPNLPPTVGSLPSSKSFLGMKARELF
RNKSESQCDEGGTAGSGCGGGSLGFAEAQTTAEMGRDLGAEAEQLQSPESPRSSPPSADS
TGQFHIMDYNEAHHEHS
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atggcccagcaggcaaatatcggggagctcctggccatgctagactcctcagtgctaagt
atgcgggaggacgtaacagccatgttcaaagagaacctcagttccgacaggggtcccatg
cttgtcaacgccttggtggattattacctggaaagcaactctcagtcagtcctggacatc
ctgacgaccttgcaggagccacatgataagcacctcctggacaagatgaatgagtatgtg
ggaaaagcgacctcacgcctgtccaccctggtgctgctgggccatgtcgcgaggctgcag
ccgccctggaagcacaagctttcccaagcgcctctcctgccttctctgctcaaatgtctc
aaggtagacacggatgtcgtggttctcaccacgggcgtcttagtgctgataatcctgctg
cccatgatcccgcagtctgggaaacagcatcttcatgacttctttgatattttcggccgc
ctttcgtcatggtgcctaaagaaacccggccacgtgacggaagtctacctggtccacctc
catgccagcgtctatgcgctcttccatcgcctctacggcatgtacccctgcaacttcgtc
tccttcctgcgctcccactacagcatgaaggagaacttggagacgttcgaggaggtggtc
aagccgatgatggagcatgtgcggattcacccggagctagtgactggatctaaggatcac
gaactggacccacggaggtggaagcggttagagacgcacgacgttgtgattgaatgtgcc
aaaatctccctggaccccgctgaagcctcccctgaagacggctattcggtgtcccggtcc
tttacccgcttgcctcaccgcacagctgaccctactgccagtccttatggtgacaccccg
aatagctatgggagcgccacttccaccccccactcctcccggctgacatcatccttcagt
tctccagggcagctacctcagaccctgacttccgcagccactcggctgggcactgagccg
ccaacgcaagcctctctctggagcccttcgatggtctgtggcatgaccacgccccccacg
tctcctggaaacgtgccccccgacgcggcgcacccgtacagtaaagtctttggtacaacg
ggtggaaaaggaacccccctgggaactccagccacctcccctcctccagccccgcttggc
cctccggatgactacatgcacagtgccctccctcaggctgcagccaccccatccaggaag
gaggagaaagcagatgccgcccgcccatgtctacataggcagcagcaccttcccaatgac
cgaggaacagaagagctgtccggccaccaggggtctgtgccgttgagtgacctgcccggg
tttctgggcgacctggcctctgaagaggacagtgtggaaaaggatagagaggaagcggcc
atctccaaggagctttctgagctgacaccagccgatgctgagccccttgttcctcggggt
ggctttgactcacccttctacccagaccgagcacccggctgtccccggaaggtgccctca
gctgcctcctgtgccccaagctgtagcgggaatcccgaggtgctcagctgctccctgggc
cccgacacaccaaagcaagccttcacacccatcgagcggcccttcacaggctcccgcgag
cacccggcggcctcagataccagcatcctctcccccagcccataccaggcctcgccaccc
aggggtctgggcttcggacgggggcagcctcccccctatgaccatctttttgaggcagcc
ctgccaaagacagcccatcacttcatccgtgagaagacagcccaactgtccaagacgcag
aaaggaagcactgatgaggcccttgtgccccgcagctccccagctgaggtgctggaccgg
ctgatccagcagggggcagacgtgcacagcaaggagctgagcaggctgtctcttcccacc
aagtctgtggactggacccactttggaggctcaccgccctcggacgagatccgcaccctt
cgctcacagctgctcttactgcacaaccagctgctctatgagcgcttcaagaggcagcag
cacgcgctccgcaaccgccggctcctccgaaaggtgatccgggcggctgctctggaggaa
cacaacgcggctatgaaggaccagctgaagctgcaggagaaggagctgcagttgtggaag
gtgagtctgcagcgggagcagggccggtacagccaactccaggaacagcgcgacactgtg
gtcagccacctgcacagccagatccggcagctgcagcaggaccgagaggacttctacagc
cagagccaggagctgcagacgaagctggaggactgccggaacatgatctcggagctgcga
ctagagctgaagaaggccaacagcaaagtgtgtcacacggagctgcagctggcccaggtg
tcccagaagttgtcgaacagcgagtctgtgcagcagcagatggagtttctgaaccggcag
ctgcttgtgctgggcgaggtcaacgagctctacttggagcagctgcagagcaaacactcg
gacactgcacaggaggtggagatgatgaaggctgcatatcggaaggagctggagaaacac
cggagtcaccttgcccagcagagccagaggctggatacctcccagaaacgagtcctggag
ctggagtcgcacctggccaagaaggaccacttattggccgagcagaagaagtacctggag
gacatcaaagcccaggccaggcagcagcagcaggccgcagagggccgctacgtggctcag
aagaggatcacacaggccttcgaactggagatcctggacctgtacggccggctagagaag
gctgggctgctgccacggcaaggccaggaccccatggaggctgctgaggtggcggaagaa
aggctcgacggctgcactgatgactgcttgggctccatctcaggccacggggaagaggtg
tccagcctcaatggggagaccaaggcttcccgacctggcggtggaggaaaccggggtgct
ggtggcagcagcagtggcagcagcgagctcttgacccccgagaaaggccccgggttgagg
gccggcccgctcggcgggcggtgggatagtgccgtgggggagtcccccaacttgccccct
accgtgggctcgcttcccagctccaagagcttcctgggcatgaaggcgcgtgaattgttt
cgcaacaagagcgagagccagtgtgacgagggcggcacagcgggcagcggttgtggtggc
ggtagtcttggcttcgcagaggcccagacgacggcagaaatgggcagggacctgggagcg
gaggctgaacaactccagagtcctgagagcccacggtcgtctcccccaagcgcagacagt
accggacagtttcacatcatggactataatgaggcgcatcatgaacacagctaa
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