Suncus etruscus (white-toothed pygmy shrew): 126009538
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Entry
126009538 CDS
T09902
Symbol
DDX31
Name
(RefSeq) probable ATP-dependent RNA helicase DDX31
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
setr01009
]
126009538 (DDX31)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
setr03009
]
126009538 (DDX31)
Enzymes [BR:
setr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126009538 (DDX31)
Protein phosphatases and associated proteins [BR:
setr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
126009538 (DDX31)
Ribosome biogenesis [BR:
setr03009
]
Eukaryotic type
Pre-60S particles
Helicases
126009538 (DDX31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
126009538
NCBI-ProteinID:
XP_049629987
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All DBs
Position
5:complement(19532077..19582603)
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AA seq
712 aa
AA seq
DB search
MAEPQVSGPRASDAPNTATTSSPRQAQARRPTKAKRKHPAASGEALAVKRRRDAALLKAQ
KAAASRGAQTLRGKASRAAPKKPLASAGDKSQEQRPGVKTSSLFKNNPDIPELPRPDVKQ
VQEKVFTSDAFQDLALHPHLISTLNTVLNMSSMTSVQKQSIPALLEGRDALVRSQTGSGK
TLAYCIPVVQSLQAMKVKIQRGDGPYALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLM
GGEKRKSEKARIRKGINILISTPGRLVDHIKSTKNIQFNRLRWLILDEADRILDMGFEKA
ITVILNALDAECPQRQNVLLSATLSEAVTRLADISLHDPVSISVMDESIGSSSSLDEEDS
DDSGSQSEDELDGFVMPQGLEQHVAVVPSKLHLVCLAAFILQKCRFESDQKMIVFFSTCE
LVEFHYTLFIQTLLGGSEAPASPRLTFLRLHGGMEQEERTAVFQEFSRSRSGVLFCTDVA
ARGLDLPLVTWIVQYNAPSSAAEYVHRVGRTARIGCRGSSLLILAPSEAEYVSSLAAHRI
NLSEMKMDTILSVLMREDCLQGTRWADQHPRGLGPQDLQARATILQTVFEDYVHSDERRV
SWAKQALQSFIRSYTTYPRHLKHIFHVRALHLGHVAKSFGLRDAPQNLGAPAVKKKKTNL
RRPGLARKTQRKQQRLAELLRSEYASGMEMAAKAKAPRQSPEPGPDGGASAV
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggctgagccccaggtctcggggccaagggcttccgacgcccccaacaccgccaccact
tccagtccacgccaggctcaagcccggaggcccaccaaggctaaaaggaagcacccagcg
gcatctggggaggctctagccgtgaagcgcagaagggatgcagctttgctcaaggcccag
aaagctgcagccagccggggggcccagactctgagaggaaaggcatcccgggctgctcca
aagaagcctctggctagtgcaggtgataagagccaggagcagaggccaggcgtgaagact
tcatctctgttcaagaacaaccctgacatcccggagctccccagacctgatgtaaagcag
gtacaggagaaggtcttcacttctgatgcctttcaggacctggccttgcaccctcacctg
atctccaccttaaacactgtcttgaacatgtccagtatgaccagtgtgcagaagcagagc
atccccgcactgttggagggcagagatgcacttgtgcgctcccagaccggctcaggtaaa
actctggcttattgcatcccagtggttcagtccctacaggccatgaaagtgaagatccag
cgtggtgatggaccctatgccttggtacttgtgcccacaagagagctggctctgcagagc
tttgacactgtccagaagctgctcaagccttttacctggattgtgcctggcgtgctaatg
ggtggagagaagaggaaatcagaaaaggccagaatccgcaaaggaatcaatatcctcatc
tccaccccgggacgcctggtggatcatataaaatccacaaagaacatccagttcaatcgg
ctgcggtggttaattctggacgaagccgacaggatcctggacatgggctttgagaaggcc
attacagtcatcctcaacgctctggatgccgagtgcccacaacgccagaacgtccttctc
tccgccacgctctcagaggcggtgacccggctcgctgacatcagcctgcacgacccagtc
agtatttctgtaatggatgagagcattgggtcaagcagctcgctggacgaagaagactca
gatgattccgggtcccagtccgaggatgagctggatggctttgtgatgccccagggtctg
gagcagcacgtagccgtggtgcccagcaagttgcatctggtgtgcctggctgccttcatc
ttgcagaagtgccggtttgaaagcgaccagaagatgattgtctttttctccacttgtgag
ttggtcgagttccactacacgctctttatccagacccttctaggaggctcagaggccccg
gcctccccgcggctgaccttcctccgtttgcacggcggcatggaacaggaggagagaaca
gcagtgttccaagaattctcacgctccagaagcggcgtgctcttctgtacggacgttgcc
gcgcggggcttggatcttcctctagtcacatggatcgtgcagtacaacgccccatcatcg
gctgctgagtatgtccaccgggtcgggaggacagcccggattggctgccggggcagcagc
ctgctcatcttggctccttccgaggcagaatatgtcagctcgctggctgctcacagaatc
aacctttcggagatgaagatggacacgattctgtctgtcctgatgagagaggattgcttg
caggggacacgctgggcagaccagcacccccgtggcctgggcccccaggacctccaggca
cgcgccaccatcctgcagacagtgtttgaagattacgtgcactctgacgagcggagggtc
tcctgggccaagcaagcactgcagtccttcatccgctcctacaccacctacccacgccac
ctgaagcacatcttccatgtccgcgcactccatctcggccacgtggcaaagagctttggg
ctcagagatgccccccagaacctcggcgctccagccgtgaagaagaagaagacaaatctg
agaaggccgggcctcgcgaggaagacgcagaggaagcagcagcgcctggctgagcttctg
cgctcggaatatgccagcgggatggagatggcggccaaggccaaagcgccacgccagtca
ccagagccgggcccggacggtggcgcctcagccgtgtaa
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