Suncus etruscus (white-toothed pygmy shrew): 126009589
Help
Entry
126009589 CDS
T09902
Symbol
RAPGEF1
Name
(RefSeq) rap guanine nucleotide exchange factor 1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04015
Rap1 signaling pathway
setr04510
Focal adhesion
setr04722
Neurotrophin signaling pathway
setr04910
Insulin signaling pathway
setr05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
126009589 (RAPGEF1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
126009589 (RAPGEF1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
126009589 (RAPGEF1)
09156 Nervous system
04722 Neurotrophin signaling pathway
126009589 (RAPGEF1)
09160 Human Diseases
09162 Cancer: specific types
05211 Renal cell carcinoma
126009589 (RAPGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
126009589
NCBI-ProteinID:
XP_049630063
LinkDB
All DBs
Position
5:complement(18859197..18938552)
Genome browser
AA seq
1236 aa
AA seq
DB search
MSGRLEKADSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKPPEVSVKIPEKPANKEATGR
FLREGCPLPLDLEQQAEFMSASAVASRSQSQKNWLGEKEKEVVSALRYFKTIVDKMAIDK
KVLEMLPGSASKVLEAILPLVQSDPRIQHSSALSSCYSRVYQSLANLIRWSDQVMLEGVN
SEDKEMVTSVKGVIKAVLDGVKELVKLTIEKQGHPSPTSPAKPSSPACRSDGGQSEVPLT
DREMEILNKTASLPQPPELLPDAVDGEPAPPKPPLPGIRVVDNSPPPALPPKKRQSAPSP
TRVAVVAPMSRATSGSSLPAGINRQDFDVDCYAQRRLSGGSHSYGGESPRLSPCSSMGKL
SKSDEQLSSLDRDSGQGSRNTSCETLDHYDPDYEFLQQDLSDADQLPHHLACNLSPLPES
ASEACSPFLGSPFQLPPGGCSPLPLPDAPPDLPPALPEKKRRSAASQTSEGSSGCRVSYE
RHPSQYDNISEADLRNPGTFPPFAAVLPFPQGEFTVPEPPGDSEKPPPLPEKKNKHMLAY
MQLLEDYSEPQPSVFYQTPQSEHVYQQKNRMLMEVYGITDSFSGADGPQELAPPPALPPK
QRQLASYAASSFSVSYCVQHTKVAFTPEDGSAAPGLSASVSNSLLSRHGALAVPSHKSVL
RSYSQGFVPPSQASGQPFLPPTSSSSSPHFPPVHQSQSSDLEGPTAAGLSSSTVDGPLSA
SQESTFPGNAACRAPETSPTASPLPPPGGHAGEDTGEGDYVGLSSGHSGEEPAGPWGESP
AMRDGHPRGSSSASGASGTENRDGGERLPSSPEAAESAQSEEEVDELSLIDHSEIMARLT
LKQEGDDGPDVRGGSGDILLVHATETDRKDLVLYCEAFLTTYRTFITPEELIKKLQYRYE
KFSAFADTFKKRVSKNTFFVLVRVVDELCLVELTEEILKLLMELVFRLVCSGELSLARVL
RKNILDKVEQKKLLRCANSDQPLAARGVAARPGTLHDFHSHEIAEQLTLLDSELFYKIEI
PEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSIIMLQEKAQDRERLLLKFIKIMKHLR
KLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLAEYCTLIDSSSSFRAYRAALSEVDPPC
IPYLGLILQDLTFVHLGNPDHIDGKVNFSKRWQQFNILDSMRCFQQAHYDIRRNDDIINF
FNDFSDHLAEEALWELSLKIRPRNITRRKTDREEKT
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgtccggccggctggagaaagcagactctcagcgttctcatctctcctccttcaccatg
aagctgatggacaaattccactcgcccaaaatcaagaggacgccatccaagaaggggaag
ccccccgaggtgtcggtgaagatcccagagaagccagcgaacaaagaggcaacaggcaga
tttctgcgagagggctgccctctccccttggatctggagcagcaggcagagtttatgtcc
gccagtgctgtggcctccaggtctcaaagtcagaagaactggctgggagagaaggagaag
gaggtggtcagtgccttgcgctactttaagaccatcgtggacaagatggcgattgacaag
aaggtccttgagatgctcccgggctctgccagcaaagtgctggaggccatcttgcctctg
gtacagagtgaccctcggatccagcacagctcggccctgtcctcttgctacagccgcgtg
tatcagagtcttgccaacctcatccgatggtctgaccaggtgatgcttgagggtgtgaac
tcggaagataaggagatggtgaccagtgtaaagggggtcatcaaggcagtgctggacgga
gtgaaggagctggtcaagctgaccatcgagaagcaagggcacccgtctcccaccagccca
gccaaacccagctccccagcctgcaggtctgatggaggccagtctgaggtgccgctgaca
gaccgggagatggagatcctgaacaagacggccagcctgccccagccccctgagctgctc
ccggacgctgtggacggggaacccgcaccccccaaacctcctttacctggcatccgggtg
gttgataacagccccccaccagcactgccccccaagaaacggcaatctgccccatccccg
acgcgtgtggcggttgtggcccccatgagtcgagccactagtggctccagcctgcccgct
ggcatcaatagacaggacttcgacgtggactgctacgcgcagagacggctctcagggggc
agccactcgtatggcggcgaatcaccccgcttgtccccctgcagcagcatgggcaagctc
agcaagtcggatgagcagctgtcgtcactagacagggacagtgggcagggctcccggaac
actagctgcgagaccctggaccattacgaccccgactacgagttccttcagcaggacctc
tccgacgccgatcagcttccccatcacttggcctgcaacctgagcccgctgcctgagtcc
gcgagcgaggcctgctctcccttcctgggctctcctttccagctgcctccaggtggctgc
tccccacttccgctgccagacgcaccccccgacctgccgcctgccctgcctgagaagaag
cgccggagcgcagcctcccagacctcagagggctcctcaggctgtcgtgtgtcctatgag
cgccacccatcccagtatgacaacatctccgaggctgacctgcgcaacccgggcaccttc
ccacccttcgccgccgtcctccccttcccgcagggcgaattcactgtgcccgagccccct
ggggactcggaaaagccaccacccctcccggagaagaagaacaagcacatgctcgcctac
atgcaactgctagaggactactcggagccgcagccatccgtgttctaccagacgccgcag
agtgagcacgtttaccagcagaagaaccggatgctcatggaggtctacggcatcaccgac
tccttcagtggcgccgatggcccccaggagctcgccccaccccccgccctgccccccaag
cagcggcagctggcctcctatgctgcttcttccttctctgtctcctactgtgtccagcat
actaaagtggccttcactcccgaggacggcagtgccgctccgggcctcagtgcgtccgtc
tctaactcccttctcagccggcacggtgccttggccgtgccctcgcacaagtccgtgctc
aggtcctactcacagggcttcgtgccgccaagccaggcttccgggcagcctttcctgcca
cctacctcctcctcctcctctccacacttccctcctgtccaccagtctcagagctctgac
ttagaggggcccactgcggccggcctgtcctccagcaccgtggacgggcctctctcggct
tctcaggagagcacctttcccgggaacgctgcctgccgtgctcccgaaacctctcccact
gcctcgcccctgccgcctccgggtggccatgctggtgaggacactggggagggggactac
gttggtctctcctcaggccacagcggtgaggagccggccggcccttggggtgagtctccg
gccatgagagacggacacccccgaggctcctcatcggccagcggtgcctccgggacagag
aacagagatggcggggaaaggctgccatcatccccagaggccgctgagtcagcgcagtcg
gaggaggaagtggacgagttgtccctcatcgaccacagtgagatcatggccaggctgacg
ctcaagcaggagggggatgacggtcctgatgtccgaggcggctcaggggatatcctgctg
gtacacgctactgagacggacaggaaagacttggtgctgtattgtgaggccttcctgacc
acctatcggaccttcatcacccctgaggagctcatcaagaagctgcagtatcgctatgag
aagttctctgcctttgccgacaccttcaagaagcgtgtgagcaaaaacacgttcttcgtg
ctggtgcgtgtggtggacgagctctgtcttgtggagttgaccgaggagatcttgaagttg
ttgatggagctggtcttccggctggtgtgcagcggggagctcagcctggcccgtgtgctc
cggaagaacatcctggacaaggtggagcagaagaagctgctcagatgcgccaactctgac
cagcccctggcagccaggggtgtggcagcccggccagggaccttgcatgacttccacagc
catgagattgcagaacagctcacgctcctggactctgagctcttctataagattgagatc
cctgaggttttgctgtgggccaaggaacaaaacgaggagaagagccccaacctgacccag
ttcacggagcacttcaacaacatgtcctactgggtccgctccatcatcatgctgcaagag
aaagcccaggaccgggagaggctgcttttgaaattcatcaagatcatgaagcacttacgg
aagctgaacaacttcaactcctacctagccatcctctctgcactggactctgcacccatc
cgcaggctagagtggcagaagcagacgtcagagggcctggccgagtactgcaccctgatt
gatagctcctcgtccttccgcgcctaccgagcggccctgtcggaggtggacccaccctgc
atcccttacttgggcctcatccttcaggatctgaccttcgtgcacctgggcaaccctgac
cacattgatggcaaggtcaacttctccaagcgctggcagcagttcaacattctggacagc
atgcgctgcttccagcaggcgcactacgacatccgaaggaacgacgacatcatcaacttc
ttcaacgacttcagcgaccacctggcggaggaggcactctgggagctgtccctcaagatc
cggccccgcaacatcacccgccggaagacagatcgtgaggagaagacctag
DBGET
integrated database retrieval system
