KEGG   Suncus etruscus (white-toothed pygmy shrew): 126009607
Entry
126009607         CDS       T09902                                 
Symbol
TLR4
Name
(RefSeq) LOW QUALITY PROTEIN: toll-like receptor 4
  KO
K10160  toll-like receptor 4
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04064  NF-kappa B signaling pathway
setr04066  HIF-1 signaling pathway
setr04145  Phagosome
setr04151  PI3K-Akt signaling pathway
setr04217  Necroptosis
setr04613  Neutrophil extracellular trap formation
setr04620  Toll-like receptor signaling pathway
setr04621  NOD-like receptor signaling pathway
setr04936  Alcoholic liver disease
setr05132  Salmonella infection
setr05133  Pertussis
setr05134  Legionellosis
setr05135  Yersinia infection
setr05140  Leishmaniasis
setr05142  Chagas disease
setr05144  Malaria
setr05145  Toxoplasmosis
setr05146  Amoebiasis
setr05152  Tuberculosis
setr05161  Hepatitis B
setr05162  Measles
setr05164  Influenza A
setr05170  Human immunodeficiency virus 1 infection
setr05171  Coronavirus disease - COVID-19
setr05205  Proteoglycans in cancer
setr05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
setr05321  Inflammatory bowel disease
setr05323  Rheumatoid arthritis
setr05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:setr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    126009607 (TLR4)
   04066 HIF-1 signaling pathway
    126009607 (TLR4)
   04151 PI3K-Akt signaling pathway
    126009607 (TLR4)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    126009607 (TLR4)
  09143 Cell growth and death
   04217 Necroptosis
    126009607 (TLR4)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    126009607 (TLR4)
   04620 Toll-like receptor signaling pathway
    126009607 (TLR4)
   04621 NOD-like receptor signaling pathway
    126009607 (TLR4)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    126009607 (TLR4)
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    126009607 (TLR4)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    126009607 (TLR4)
   05161 Hepatitis B
    126009607 (TLR4)
   05171 Coronavirus disease - COVID-19
    126009607 (TLR4)
   05164 Influenza A
    126009607 (TLR4)
   05162 Measles
    126009607 (TLR4)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    126009607 (TLR4)
   05135 Yersinia infection
    126009607 (TLR4)
   05133 Pertussis
    126009607 (TLR4)
   05134 Legionellosis
    126009607 (TLR4)
   05152 Tuberculosis
    126009607 (TLR4)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    126009607 (TLR4)
   05144 Malaria
    126009607 (TLR4)
   05145 Toxoplasmosis
    126009607 (TLR4)
   05140 Leishmaniasis
    126009607 (TLR4)
   05142 Chagas disease
    126009607 (TLR4)
  09163 Immune disease
   05323 Rheumatoid arthritis
    126009607 (TLR4)
   05321 Inflammatory bowel disease
    126009607 (TLR4)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    126009607 (TLR4)
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    126009607 (TLR4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:setr04131]
    126009607 (TLR4)
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:setr04054]
    126009607 (TLR4)
   04090 CD molecules [BR:setr04090]
    126009607 (TLR4)
   00536 Glycosaminoglycan binding proteins [BR:setr00536]
    126009607 (TLR4)
Membrane trafficking [BR:setr04131]
 Endocytosis
  Phagocytosis
   Toll-like receptors
    126009607 (TLR4)
Pattern recognition receptors [BR:setr04054]
 Membrane-bound pattern recognition receptors
  Toll-like receptors
   126009607 (TLR4)
CD molecules [BR:setr04090]
 Proteins
  126009607 (TLR4)
Glycosaminoglycan binding proteins [BR:setr00536]
 Hyaluronan
  Cell surface receptors
   126009607 (TLR4)
SSDB
Motif
Pfam: LRR_8 LRR_4 TIR LRR_1 TIR_2 LRR_14 LRR_9 LRR_Zer-1 LRR_NXF1-5 LRR_EndoS ThsB_TIR LRR_R13L1-DRL21
Other DBs
NCBI-GeneID: 126009607
NCBI-ProteinID: XP_049630092
LinkDB
Position
5:complement(5997927..6009315)
AA seq 841 aa
MMPLSPVAGTLIPAMAFLFCLRSESWDPCMQVVPNITYDCMKRDLYRIPENIPRSTKKLD
LSFNSIKRLSSHSFSNFPELQVLDLSSCEIHIIEDDAYEGLHHLSALILTGNPIQNLAPG
AFSGLSNLQKLVAVEIKLEYLEDFPIRHLRTLKELNVAHNFIQSFKLPDYFSNLPNLENL
DLSNNRIQNIYQKDLKVLHQTPLPKLSLDVSRNILDFIQPGAFKEIRLHELIFRSNFRSN
SIMKSCIQGLAGLQVDSLVLGEFRNERMLDDFDISILEGLHNLTFREVRIAYLRGGPEDI
AKIFNYLENASAISLVSLYLVEFKKLPKDFRWQQLKFIHCKFEEFPELRLTSLKKLVFNF
NSGKFMFRNVELPSLEYLDLSKNGINFGHCCSQEQFGTSRLKYLDLSFNGLITMSSNFMG
LEQLEYLDFQHSNLKQTNDFPIFLLLKNLIYLDISYSQIQVAFHGLFNGLASLQVLKMAG
NSFLNNILPNIFMELANLTLLDISNCQLEQVSPGAFDSVPRLQLLNLSGNNLLFLDTLPY
KPLSALQVLDYSFNRIVASKQQELKPFPSNLTFLNLTQNDFACGCEHQTFLEWLKDQRKV
LVNADQILCTSPFDMQGMPVLXNQKCNLSQTHALIIVLVVTGLVIVVVSVLIYKFYFHLM
LLAGCKTYNRGESVYDAFVIYSSQDEDWVRNELVKNLEEGVPPFQLCLHYRDFIPGVAIA
VNIIQEGFHKSRKVIVVVSKHFIQSRWCIFEYEIAQTWQFLSSHAGIIFIVLQKIEKSLL
KQQVELYRLLSRNTYLEWEDNVISRHIFWRRLRKALLNGKTWVGDGTECAEDSQHDEKAP
L
NT seq 2526 nt   +upstreamnt  +downstreamnt
atgatgcccctctcacccgtggctgggactctgatcccagccatggcgtttctcttctgc
ctgagatctgaaagctgggatccttgtatgcaggtggttcctaatatcacttatgattgc
atgaagagggatctctacagaattcctgagaacatcccaagatcaaccaagaaattggac
ctgagctttaattccataaagcgtttaagtagtcatagtttctccaacttcccagagtta
caggtgctagatttatccagttgtgaaattcacataattgaagatgatgcttatgaaggc
ctacaccatctctctgcattgatactgacaggaaatcccatccagaatttagctcctgga
gccttttctggactatcaaacttacagaagctggtggctgtggagatcaaactagaatat
ctagaggactttcccatcagacatctcagaaccttgaaagagctgaatgtggctcataat
ttcatccagtccttcaaattaccagattatttttctaatcttcccaacctggagaacttg
gacctatccaataacaggatccaaaatatttatcagaaagacttaaaagttctacatcaa
acacccctacccaaactctctttagatgtgtccaggaacattttagactttatacaacca
ggtgcctttaaagaaattagactccatgaattgattttcagaagtaattttagaagtaac
agtatcatgaaatcctgtattcaaggcctggctggcttacaagttgatagcttggttttg
ggagaatttagaaatgaaaggatgttggatgattttgatatatctatattggaggggttg
cataatttgacctttagggaagttcgaattgcatacttaagaggtggtccagaagatatt
gctaaaatattcaattatttggaaaatgcttctgctatatctctagtgagtctatatctc
gttgaattcaaaaaacttcctaaagatttcaggtggcaacaattaaaattcattcattgt
aaatttgaagaatttcctgaattaaggctcacatctctcaaaaagttagtttttaatttc
aatagtggtaagtttatgtttcgtaatgttgaactcccaagcctcgaatatcttgacctc
agcaaaaatggcatcaactttgggcattgctgttctcaggagcagtttgggacaagcaga
ctaaagtatttagacctgagcttcaatggccttattaccatgagctcaaactttatggga
ttagagcagctagaatatcttgactttcagcattctaatttgaagcagactaatgatttc
ccaatatttttattactcaaaaacctcatttaccttgacatttcctattctcaaatccaa
gttgctttccatggcctctttaatggtttggccagtctccaagtgttaaaaatggctggc
aattcttttctaaataacatccttccaaatatttttatggaactggctaatttaactttg
ctggatatttctaactgtcaactggaacaagtatctccaggggcatttgattcagtccct
agactccagttgctaaatctgagtgggaacaacctcttatttcttgacacacttccttat
aaacctctcagtgccctccaggttctagactacagttttaatcggatagtggcctccaaa
caacaagaactgaagccctttccaagtaatctcactttcttaaatctcactcagaatgac
tttgcttgtggctgcgaacatcagactttcctggagtggctcaaggatcagaggaaagtc
ttggtaaatgctgatcagatactgtgcacatctcctttcgacatgcagggcatgcccgtg
ctgnnaaatcagaaatgcaacctgtcacagacccatgctctcatcattgtgttggttgtc
actggacttgtaatagttgtggtctcggttcttatctataagttctatttccacctgatg
ctccttgctggctgcaaaacctataacagaggcgaaagtgtttatgatgcctttgttatc
tattcgagccaggatgaggactgggtaaggaatgaattggtgaaaaacttggaggaggga
gtacctccctttcagctctgccttcactacagagactttatacctggtgtggccattgct
gtcaacatcattcaggaaggtttccataaaagcaggaaggttatcgttgtggtgtctaaa
cacttcatccagagccgatggtgtatcttcgagtatgagattgctcagacttggcaattt
ctaagcagccatgctggcattatctttattgtcctgcagaaaatagagaagtctctgctc
aagcaacaggtcgagctgtaccgacttcttagcagaaacacatacctggagtgggaggac
aatgtgataagtcggcacattttctggagacggctccggaaagctctcctgaatggtaaa
acctgggttggagatggaacagagtgtgcagaagatagccagcatgacgaaaaagccccc
ctctaa

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