Suncus etruscus (white-toothed pygmy shrew): 126009610
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Entry
126009610 CDS
T09902
Symbol
LRSAM1
Name
(RefSeq) E3 ubiquitin-protein ligase LRSAM1 isoform X1
KO
K10641
E3 ubiquitin-protein ligase LRSAM1 [EC:
2.3.2.27
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126009610 (LRSAM1)
04121 Ubiquitin system [BR:
setr04121
]
126009610 (LRSAM1)
Enzymes [BR:
setr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126009610 (LRSAM1)
Membrane trafficking [BR:
setr04131
]
Autophagy
Xenophagy
Other xenophagy associated proteins
126009610 (LRSAM1)
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126009610 (LRSAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
zf-C3HC4_3
LRR_4
LRR_1
SAM_1
SAM_2
Prok-RING_4
zf-RING_2
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
126009610
NCBI-ProteinID:
XP_049630096
LinkDB
All DBs
Position
5:15433398..15465722
Genome browser
AA seq
726 aa
AA seq
DB search
MPLFFRKRKPSEEARKRLEYQMCLAKEAGADDILDISKCELSEIPYGAFATCKVLQKKVL
IVHTNHLSTLLPKSCSLLSLATIKVLDLHDNQLTVLPDDLGQLTALQVLNVEKNQLTSLP
RSIGHLAQLQTLNVKDNRLKELPDTLGELRSLRTLDISENEVQRLPQMLAHVRTLETLSL
DASSMVYPPQEVCSAGTAAIQQFLCRESGLDYYPPSQYLLPVLERDGAESCRDCPDGLLE
RFSQEELEWQNRFSDYEKKKEQKMLQKLEFERHLELGQREHAQLLLQSHNQKDEILQTVK
EEQSRLEQGLSERQRYLDAERQRLQEQLKQTELDISGRIQRLLQENQRQKKSSEILKSLE
NERIRMEQLMAITQEETENLRRREIASAMQQMLTESCKNQLIQMAYESQRQSLVQQACSS
MAEMDQRFQQILSWQQMDQNKAISQILQESAMQRAAFEALQVKKDLAHRQIRHQIKLIET
ELLQLTQLELKRKSLDTETLQEMVSEQRWTLSRLLQQLLKEKEQREEELRAILMELEAKS
ETKQENYWLIQYQRLLNQKPLSLRLQEEGLERELVALLEELSAEHYLPLFAHHRLSLDLL
SRMSPGDLAKVGVSEAGLQHEILRRARALLDAARAKPELLKAPKVEAPEEPPNAPEEAPA
SITPSAPPQELEVSTSECVVCLEREAQMIFLNCGHVCCCQQCSPPLRTCPLCRQDIAQRL
RIYHSG
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttttcttccgcaagaggaaacccagtgaggaggcacggaaacgcctggaatac
cagatgtgtctggccaaagaagcgggggctgatgacattcttgacatctcgaagtgtgaa
ctctcagagattccatatggggcctttgcaacgtgcaaggttctgcagaagaaggtgcta
attgtccacacgaatcacctcagcactttgctcccgaaatcctgcagcctcctgagcctt
gcaaccatcaaggtcctggatcttcatgacaaccagctgacagtccttccagatgatcta
gggcagctgacagccttgcaggtattaaatgtggaaaaaaaccaactgacatcactcccg
cgctccattgggcacctggcccagctccagaccctcaatgtgaaagacaacaggctgaag
gagctgcccgacaccctgggggaacttcgcagcctgcggactctggacatcagcgaaaac
gaggtgcagcggttaccgcaaatgctggcgcacgtccgaaccctggagaccctgagcctc
gacgcctcgtccatggtgtaccccccacaggaggtgtgcagtgctggcaccgcggccatt
cagcagttcctctgcagagagtcaggcctggactactaccctccttcccagtacctgctg
cctgtgctagagcgggacggagctgagagctgcagggactgccctgatgggctcctggag
agattctcacaggaggagctagagtggcagaacaggttctctgactacgagaagaagaag
gagcagaagatgctgcagaagctggagtttgagcggcacctggagctcgggcagcgcgaa
cacgcacaactccttctgcagagccacaatcagaaggatgagatcctacagacagtcaag
gaggagcagtcacggctggagcagggcctgagtgagcgccagcgctatctagatgccgag
cgccagcgactgcaggagcagctcaagcagacagagttggacatctcaggccggatccag
aggctcctgcaggagaaccagaggcaaaagaaaagctctgagattctgaagtcattggaa
aacgaaagaataagaatggaacagctaatggctataacccaggaagagacggagaatctg
cggcgtcgagagattgcctcggccatgcagcaaatgttgactgagagctgcaagaaccag
ctcatccagatggcctatgagtctcagaggcagagcttggtgcagcaggcctgttccagc
atggctgaaatggaccagcggttccagcagattctgtcatggcagcagatggaccagaac
aaagcgatcagccagatcctgcaggagagtgccatgcagagggctgccttcgaggcactg
caggtgaagaaggacttggcccaccggcaaatccgccaccagattaagttaatagaaact
gagttattgcagctgacacagctggagttaaagaggaaatccctggacacagagacactg
caggagatggtctcagagcagcgctggaccctcagccgcctgctgcagcagctgctcaag
gagaaggagcagcgtgaggaggagctgcgagccatccttatggagctcgaagccaaaagt
gaaaccaaacaggaaaattactggctgatccagtaccagcgactcctgaaccagaagccc
ttgtccctgaggctgcaggaggaaggcctggagcgtgagttggtggccctcctggaggag
ctgtcagccgagcattacctgcccctctttgcccaccaccgcctctcactagacctgctg
agccggatgagccccggagacctggccaaggtgggcgtctctgaggctggccttcagcat
gagatcctgcggcgagcccgggccctgctggatgctgccagggctaagccagagctgctg
aaagcacccaaggttgaggcccctgaagagccccccaatgcccctgaggaggcacctgca
tctataacgccatcagcgcctccacaggaactggaggtgtccacctcagagtgtgtggtg
tgtctggaacgggaggcccaaatgatcttcctcaactgcggccacgtgtgctgctgtcag
cagtgcagcccgcctctgcgcacctgcccgctgtgccgccaggacatcgcccagcgcctg
cgcatctaccacagcggctga
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