Suncus etruscus (white-toothed pygmy shrew): 126009681
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Entry
126009681 CDS
T09902
Symbol
TNC
Name
(RefSeq) tenascin
KO
K06252
tenascin
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04151
PI3K-Akt signaling pathway
setr04510
Focal adhesion
setr04512
ECM-receptor interaction
setr05165
Human papillomavirus infection
setr05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
126009681 (TNC)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126009681 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
126009681 (TNC)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
126009681 (TNC)
09172 Infectious disease: viral
05165 Human papillomavirus infection
126009681 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
setr00536
]
126009681 (TNC)
Glycosaminoglycan binding proteins [BR:
setr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
126009681 (TNC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
EGF_TEN
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_Dep-1_2nd
EGF
NDNF
fn3_2
Motif
Other DBs
NCBI-GeneID:
126009681
NCBI-ProteinID:
XP_049630188
LinkDB
All DBs
Position
5:8954247..9026486
Genome browser
AA seq
2199 aa
AA seq
DB search
MGAVTWLLTGIIVLALSSLPTEGGVLKRVIRHKRESGANVTLPEDNQPLVFNHVYNIKLP
MGSQCSVDLESPNGNKDVAPPPEPSESFQEHTTDGQNQIVFTHRINIPRRACGCASAPDI
KELLNRLEELESVVSSLREQCSSGMGCCLQSAEGRLDTRPLCNGRGNFSAEGCGCVCEPG
WKGPNCSESECPGHCNLQGQCLDGQCICDEGFTGEDCSQLACPSDCNDQGKCVNGECVCF
EGYSGLDCSEEVCPIPCLHGHCVDGQCVCQDGFAGEDCAEPLCLNNCNQRGRCVENECVC
DEGFTGEDCSELICPNDCFDRGRCVNGTCYCEEGFEGEDCGQLTCPNACHGQGRCDEGQC
VCHEGFTGPDCRERRCPSDCHHRGRCVDGRCECDDGYTGQDCGELQCPNGCSGHGRCVNG
QCVCDEGYTQEDCGQRSCPNDCHGRGHCLQGHCVCQPGFQGADCSEIKCPHDCHKQGRCV
NGMCVCEDGFTGEDCGQKRCPRDCSHRGRCIDGQCVCEDGFTGLDCSELACPGHCQGQGR
CVNGQCVCHEGFTGKECQERRCPADCHGQGRCVDGQCVCQEGFEGLDCAQRSCPNGCSNL
GQCVAGSCICDEGHTGEDCSEVSPPKDLIVTEVTEETVNLAWDNEMRVTEYLIIYTPTHE
DGLEMQFRVPGDQTSTTIQELEPGVEYFIRVFAILENKKSIPVSARVATYLPAPEGLRFK
SIKETSVDVEWDPLDIAFEAWEISFRNMNKEDDQGITRSLKRPETTYRQTGLAPGQAYEI
TLHIMKNNTRGPGVKRVTTTRLDAPSHIEVKDITDTTALITWFKPLAEIDGIELTYGIKN
VPGDRTTIDLTHDENQYSIGNLKPDTEYEVSLISRRADMSSNPANETFTTGLDAPRNLRR
TSQTDSSITLEWRNVKADVDSYRIKYAPISGDDHTEIEVPKSQEATTKATLTDLRPGTEY
GIGVSAVKEDKESDPTTINAATDLDGPKDLRVTETSETSMNLLWKAPLAKFDHYRLNYSL
GAGQSMELQLPRDTTSYILKDLEPGKEYSVILRTEKGRHKSKPARVKASTDHILALENLT
VTEVGWDGLKLQWNTADQTYEHFVIQVQEANGVEAVQNLTVPGSLQAVDVPGLKSNTPYN
VTLYGVIRGSRTPVLSAEASTGETPSLGEVTVSKVAWDALTLNWTAPEGRYEHFFIEVQE
RDTVNTSQNFTVSGAQRSMDLPGLKASTHYKVSIRGVTQDFSTTPVLVEVLTEEIPDLEN
LTVTEVSWDAFTLNWTSPDGIFEHFVIEVQEADQDEGHRLLVPGNLHSMEIPGLRAGTPY
KITLHGELKGRKSRPLAVEAITEELPQLGDLAVTEVGWDGLQLHWTTADQTYEHFVIQVQ
EANRVEEAQNFTVPGNLRAVDVPSLKAGTPYRVTLYGVIQGSRTPELSTEAFTAREPEIR
NLQVSDVTPDSFNISWTATDGAFETFTIEIVDSNRFLKTLEYNISGDERAAHISGLRPSN
DFIVYLTGLTPNIQTKTITATATTEALPLLENLTIFDINPYGFTVSWMASENAFDSFLVV
VVDSGKLLDPQEFTLSGTQRKLELRGLITGIGYEVMVSGFIQGHQTKPLRAEVVTEAEPE
VDNLLVSDATPDGFRLSWTADEGVFDSFVLKIRDTKKQSEPLEIALLSPERTRDITGLRE
ATEYEVELYGISGGRRSQPVSALATTAMGSPKEILFSDITENSATVSWMAPMTKVESFRI
TYVPITGGTPSVITMDGTETRRRLVRLLPGEEYLVSIVAMKGFEESEPVSGTFTTALDGP
SGLVTANITESEALVRWQPAIAPVDTYVISYTAERVPEVTRTVSGNTVELELAGLEPATE
YTLKIFAEKGPQKSMSLTTKFTTELDSPKDLTATEVQSETALLTWRPPRAAVTGYLLVYE
SVDGTVKEVILGPEMTSYNLADLSPSTHYTAKIQALNGSLRSKLVQIFFTTIGLLYPFPK
DCSQAMLNGDTTSGLYTIYLNGDKAQPLEVFCDMTSDGGGWIVFLRRKNGLEDFYRNWKA
YAAGFGDRREEFWLGLDNLHKITSQGQYELRVDLQDHGESAYAVYDKFSVADARSLYRLK
VEGYSGTAGDSMAYHNGRSFSTFNKDTDSAITNCALSYKGAFWYKNCHRVNLMGRYGDNS
HSQGVNWFHWKGHEHSIQFAEMKLRPSNFRNLEGRRKRA
NT seq
6600 nt
NT seq
+upstream
nt +downstream
nt
atgggggctgtgacttggttgttgactggtataatagtcttagctttatcctccttgcca
actgaaggaggggtcctgaagagagtcatccggcacaagcgagaaagtggggcaaatgtg
accctaccagaagacaaccagccattagtgtttaatcatgtctacaacatcaagctgccc
atggggtcccagtgctcagtagatctggaatcccccaatggcaataaagatgtggcccca
ccaccagaacctagtgaaagctttcaggagcacacaacagatggacagaaccaaatagtc
ttcactcaccgaatcaacatcccccgccgggcctgtggttgtgcctctgctcctgatatc
aaggagcttctgaatcgactggaagagctggagagtgtagtgtcttccttgcgggaacag
tgcagttcaggcatgggctgttgtcttcagtctgctgaaggtcgcctggacaccaggccc
ttgtgcaatggccgaggaaacttcagtgctgaaggctgtggctgtgtctgcgaaccaggc
tggaaaggtcccaactgctctgaatctgaatgtcctggtcactgcaatctgcaaggccag
tgcctggatggacaatgcatctgtgatgaaggcttcactggagaggactgcagccaactg
gcctgtcccagtgactgcaatgaccagggaaaatgtgtgaatggggaatgtgtatgcttt
gagggctactctggcctggactgcagcgaggaggtctgtcccataccatgcctccacggc
cactgcgtggatggccagtgcgtgtgccaggatggttttgcaggcgaggactgcgccgaa
ccgctgtgcctgaacaactgcaaccagcgtgggagatgcgtggagaatgaatgtgtctgc
gacgaggggttcacgggtgaggactgcagtgaactcatctgtcccaatgactgctttgac
cgtggccgctgtgtcaatggcacatgctactgcgaagaaggtttcgaaggcgaagactgt
ggccaactcacttgtcccaacgcctgtcacggccaaggccgctgtgatgagggccagtgt
gtatgtcacgagggctttactgggccagattgcagagaacgacgctgtccctccgactgt
caccaccgtggccgctgtgtggatggacgttgtgagtgtgatgatggctacacaggacag
gactgtggtgagcttcagtgtcccaatggctgcagtggtcatggccgctgtgtcaatgga
cagtgtgtgtgtgacgaggggtatacccaagaggactgtggacagagaagctgccccaat
gactgtcacggcaggggacactgcctgcagggccactgtgtctgccaacctggcttccag
ggtgctgactgcagtgagatcaagtgtccccatgactgtcacaagcagggccgctgtgtg
aatggcatgtgtgtgtgtgaggatggtttcaccggggaagactgtggacagaagaggtgt
ccccgagactgtagtcacaggggtcgctgcattgatggccagtgtgtttgtgaggatggc
ttcactggcctagactgttctgagctggcctgtccaggtcactgtcaaggccagggccgc
tgtgtcaacgggcagtgcgtatgtcatgagggtttcactggtaaagaatgccaggagcgg
aggtgtcctgctgactgtcatggtcagggtcggtgcgtcgacggacagtgcgtgtgccag
gaaggtttcgagggtctggactgtgctcagcgttcctgtcccaatggctgcagtaacttg
ggacagtgcgtggctgggagctgtatctgtgacgagggccacaccggagaagactgctct
gaggtgtcccctcccaaagacctcattgtgacagaagtgacagaagaaaccgtcaatctg
gcctgggacaatgagatgcgggtcacagagtatctcatcatctacacccctactcatgag
gacggcctggaaatgcaattccgtgtccctggtgaccagacatccaccaccatccaggag
ttggaacctggagtagagtacttcatccgagtgtttgccatcctggagaataagaagagc
attcctgtcagtgcccgagtggccacttacttgcctgcacctgaaggcctgagattcaaa
tctatcaaggagacttctgtggatgtggagtgggaccctctagatattgcctttgaagcc
tgggaaatcagtttccgaaatatgaataaagaagatgatcaagggataacaagaagcctg
aagagaccagagactacttataggcaaactggcctggctcctggacaagcatatgagata
actctgcatatcatgaaaaacaacacccgaggcccaggtgtgaaaagagtcacaaccacc
cgtttggatgcccccagtcatatcgaggtgaaagatatcacagacaccactgctctgatc
acctggtttaagcctttggcagaaattgatggcattgagctcacctatgggatcaaaaat
gtgcctggagaccgcactaccattgacctcacacatgatgagaaccagtactccattggg
aacctaaagccagacacagaatatgaggtgtcccttatctcccgtcgtgctgacatgtcc
agtaacccggccaatgagaccttcacaacaggcctggatgcccctagaaatctgcgacgc
acttctcagacagacagtagcatcaccctggaatggaggaatgtcaaggcagatgtagac
agctacagaatcaagtatgcacccatttctggagatgaccacactgagattgaagtcccc
aagagccaggaagccacaaccaaagccacactcactgatctgaggccaggaactgaatat
gggattggtgtgtcggctgtgaaggaagacaaggagagcgaccccaccactataaatgcg
gccacagatctggatggacccaaggatcttcgggttactgaaacttcagagaccagcatg
aacctactttggaaggcaccactggccaagtttgaccattaccgtctcaactatagtctt
ggagctggccaatccatggagttgcagctccccagagacactacctcatacatcctaaaa
gatctggagcctgggaaggaatatagtgtcatcctcaggacagagaaaggcagacacaaa
agcaagccagcacgtgtgaaggcttccacagaccacatccttgcattggaaaacctcacg
gtgaccgaggttggctgggatggcctcaaactccaatggaacacagctgaccagacctat
gagcactttgttattcaggtgcaggaagccaatggggtggaggcagttcagaacctcaca
gtgcctggcagcctccaagctgtggatgttccaggcctcaagtccaacaccccttataat
gttactctctatggtgtgatccgaggttctaggacaccggtactctctgctgaggcttcc
acaggggaaactcccagtttgggagaggtcactgtgtccaaggtggcctgggatgccctc
acactcaactggacagctcctgaagggagatatgagcactttttcattgaagtgcaagag
agagacacagtaaatacatctcagaacttcacagtttcaggagcacaaaggtccatggac
cttcctgggctcaaagcatcgacacactataaagtctccatccgtggggtcactcaagat
ttcagcacaacccctgtcttggttgaagtcttgacagaggagattccagatctagaaaat
ctcacagtaactgaggttagctgggatgcttttacactcaactggacctccccagatggg
atctttgaacattttgtcattgaggtccaggaggcagaccaagatgaaggtcataggctg
ctagtgcctggaaacttgcattcaatggagatcccaggactgcgagctggcaccccttac
aaaatcaccctgcatggcgagctcaagggtcgcaaatctagaccccttgctgtggaagcc
atcacagaggaactcccccagctgggagacttagctgtgactgaggttggctgggatggc
ctccaactccactggaccacagctgaccaaacctatgagcactttgtcattcaggtgcag
gaggccaatcgtgtggaggaggctcagaatttcacagtgcctggcaacctccgggctgtg
gatgtcccgagcctcaaggcaggcaccccttatagggttactctctatggggtgatccag
ggctctaggacaccggagctctctactgaggccttcacagctagagaacctgaaatcaga
aacttgcaggtttctgacgtaactcccgacagcttcaatatctcctggacagcaacagat
ggtgcctttgagacttttaccattgaaattgttgattccaataggttcctgaaaacactg
gaatataatatctctggtgatgaacgggctgctcatatctctgggctccgccctagtaat
gattttattgtctacctcactggactcactcccaacattcaaaccaaaaccatcacggca
acagccaccacagaggctctgccccttctggaaaacctaaccattttcgacattaatccc
tacgggttcacggtgtcctggatggcatcggagaatgcctttgacagtttcctagtggtg
gtggtggattctgggaagctgctggatccccaggaattcaccctttcaggaacacagagg
aagttggagctcagaggtcttataactggcattggctatgaggttatggtctctggcttc
atccaagggcaccaaaccaagcccttgagggctgaggttgttacagaagctgagccagaa
gttgacaaccttttggtttcagatgccactccagatggtttccgtttgtcctggacagct
gatgagggggtcttcgacagttttgttctcaaaatcagagatactaaaaagcagtctgag
ccactggaaatagccttactttcccccgaacgtaccagggacataacaggtctcagagag
gccaccgaatatgaagttgagctctatggaataagcggtggaaggagatcccagccagtc
agtgccctagcaacaacagcaatgggctctccaaaggaaatccttttctctgacattact
gaaaactcggccactgtcagctggatggcacccatgactaaagtggaaagcttccggata
acttatgtgcccataacaggaggcaccccctcagtgataaccatggatggaaccgagact
agaagaaggctggtgagactcttacctggagaagagtacctggtcagcatcgttgccatg
aagggctttgaggagagcgagccagtctcagggactttcaccacagctttggatggccca
tctggcttggtgacagccaacatcactgagtcagaagctttggtcagatggcaaccagcc
attgcccctgtggacacatatgttatctcctacacagcagagagagtgccggaagttaca
cgcacggtgtccgggaacacggtggagttggagctggcaggtctggagcctgccacagaa
tataccctgaagatctttgcagagaaaggaccccagaagagcatgagcctcaccaccaag
ttcactacagaacttgattctccaaaagacttgactgcgactgaggtccaatcagaaact
gcccttctcacctggcgacctcctcgagcagctgtcactggttacctgttggtatatgaa
tctgtggatggtacagtcaaggaagtgattttgggcccagagatgacctcttacaacctg
gcagatctgagtccatccacccactatacagccaagatccaggccctgaatgggtccctc
aggagcaagttggtccagatcttcttcactacaattggacttctatatccattccccaag
gactgctcccaagcaatgttgaatggggacacgacttctggtctctacaccatttatctc
aatggtgacaaggcccaacccctggaagtcttctgtgacatgacttctgatggaggtggc
tggattgtgttcctgaggcgcaaaaatgggcttgaagatttctatcgaaactggaaggcc
tacgcggctggttttggggaccgcagagaagaattctggcttgggctggacaaccttcac
aagatcacatcccaaggccagtatgagcttcgagtggaccttcaggaccatggggagtca
gcctatgccgtctatgataaattcagtgtggccgatgccagaagtctctataggctgaag
gtggagggatacagtggcacagcaggggactcgatggcctatcacaatggcaggtccttc
tccactttcaacaaggacaccgactctgccatcaccaattgtgccctatcctacaagggg
gctttctggtacaagaattgtcaccgtgtcaatctgatgggaagatatggagacaatagc
cacagtcagggtgtcaactggttccactggaagggtcacgaacactcaatccagtttgca
gagatgaagttgagacccagcaacttccgaaatcttgaaggcaggcgcaagagggcataa
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integrated database retrieval system
