Suncus etruscus (white-toothed pygmy shrew): 126009952
Help
Entry
126009952 CDS
T09902
Symbol
SMARCA2
Name
(RefSeq) LOW QUALITY PROTEIN: probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03082
ATP-dependent chromatin remodeling
setr04714
Thermogenesis
setr05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126009952 (SMARCA2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
126009952 (SMARCA2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
126009952 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
setr03021
]
126009952 (SMARCA2)
03036 Chromosome and associated proteins [BR:
setr03036
]
126009952 (SMARCA2)
Transcription machinery [BR:
setr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
126009952 (SMARCA2)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
126009952 (SMARCA2)
Chromatin remodeling factors
BAF complex
126009952 (SMARCA2)
PBAF complex
126009952 (SMARCA2)
GBAF(ncBAF) complex
126009952 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
HDA2-3
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
126009952
NCBI-ProteinID:
XP_049630216
LinkDB
All DBs
Position
1:complement(68743726..68984688)
Genome browser
AA seq
1581 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTV
GSVDFPQEGMHQMHKPIDGIHDKGIVEEIHCGSMKGTSMRPPHPGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGPLVQGDPQVMSQPNRGPSPFSPVQLH
QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQPPPQQQPQPQPQPQQSQQQQA
LVSFNRSTGPGTEMSGSSTPQKLPVPVPSGRPSPAPPAAAQPPAAAVPGPSVQQPVPGQP
SPILQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDLRTK
ATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQ
QKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKET
ERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKE
KKKRRRRKKKAEENAEGGEPALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKAS
QLDAWLEMNPGYEVAPRSDSEESDSDYEEEDEEEEPTKQETEEKIVLDPNSEEVSEKDAK
QIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQVXFGFLD
KALEWMVSCIITIXNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWT
YEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMI
VDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTF
EQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCD
MSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESF
AEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFR
NFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWN
PHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSS
SHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPK
RKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAI
EDGNLEEMEEEVRLKKRKRRRNVEKDPAKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNA
IIDTVINYKDRCNVEKVASNSQLEIEGNSSGRQLSEVFIQLPSRKELPEYYELIRKPVDF
KKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKE
EESEDETNEEEEEEDEEESESEAKSVKVKIKLNKKEEKGRDKGKSKKRPNRGKAKPVVSD
FDSDEEQDENEQSEASGTDDE
NT seq
4746 nt
NT seq
+upstream
nt +downstream
nt
atgtccacacccacagaccctggtgcaatgccccacccagggccgtcaccagggccggga
ccctctcctggaccaattctgggacctagtccggggccaggaccatccccaggttctgtc
cacagtatgatggggccaagtcctggacctccaagtgtctcacatccaatgccgacagtg
gggtctgtggacttcccgcaggaaggcatgcatcaaatgcataagcctattgatggtata
catgacaagggcatcgtagaagagatccattgtggatcaatgaaaggcaccagtatgcga
ccaccacacccaggaatgggccctcctcagagccccatggatcagcacagccaaggttac
atgtcaccacacccatccccattgggagctccagagcacgtctccagccctatgtcagga
ggaggcccgaccccaccacagatgccgccaagccagcctgggccccttgtccaaggtgat
ccacaggtgatgagccaacccaaccgaggaccttcgccttttagccctgtccaactgcat
caactacgagcgcaaattttagcttacaaaatgttggcccgaggccagcccctccctgaa
accctgcagcttgcagtccaggggaaaaggacattgcctggcatgcaacagcagcaacca
ccaccacagcagcagccacagccacagccacagccacagcagtcacaacagcagcaggcc
cttgttagcttcaacagatcaacaggcccagggacagaaatgagtggctcaagcaccccg
cagaagctacctgtgcctgtgcccagtggccggccctcacctgcaccccctgcagcagca
cagcctcctgcagctgccgtgcctggaccttccgtgcagcagcctgtcccagggcagcct
tcacccatccttcagcttcagcagaagcagagccggatcagtcccattcagaagccgcaa
ggcctggaccctgtggagatcctgcaggagagggaatacagacttcaggctcgcatagct
catagaatacaagaactggaaaatctacctggttccttgccacctgatttacgaaccaaa
gcaactgtggaattaaaggcacttcgattactcaatttccaacgtcagctaagacaggaa
gtggtggcttgcatgcgccgggataccacccttgagactgctctcaactccaaagcatat
aagcggagtaagaggcagaccttgcgggaggcccgcatgacagagaaactggagaagcag
cagaagattgagcaggagaggaagcgccggcagaaacatcaggaatacctgaacagtatt
ttgcaacatgcaaaagattttaaagaataccaccggtctgtggctgggaagatccagaag
ctttccaaagcagtggctacatggcatgccaatacagaaagggaacaaaagaaagagaca
gagcggattgaaaaggagagaatgaggagattgatggctgaagatgaagagggctatcga
aagctgattgatcaaaagaaagacaggcgcttagcttaccttttgcagcagactgatgaa
tatgtggccaatttaactaacctggtttgggagcacaagcaagcacaagcagccaaagag
aagaagaagaggaggcggaggaagaagaaggctgaagagaatgcagagggaggagagcct
gcactgggaccagatggagagcccatagatgaaagcagtcagatgagtgaccttcctgtt
aaagtgactcacacagaaactggcaaagttctgtttggaccagaagcccctaaagcaagt
caactggatgcctggttggaaatgaatcctggttatgaagttgcgcccagatctgacagt
gaagagagtgattctgattatgaagaggaggatgaggaagaagagcccacaaagcaagag
actgaagagaaaatagtcttggatccaaacagtgaagaagtttccgagaaggatgccaag
caaataattgagacagctaagcaagatgtggatgatgaatacagcatgcaatacagtgcc
agaggctcccagtcttactacacagtggctcatgccatctctgagagggtggagaagcag
tcagccttgcttattaatggaactctgaaacactatcaggtatgatttggtttccttgac
aaggccctagaatggatggtttcctgtataataacaatttgaaacggaatcttagctgat
gaaatggggctaggaaagaccatacagaccattgcactcatcacttatctgatggagcac
aaaagactcaatggcccctatctcatcatcgttcccctttcgactctttctaactggaca
tatgaatttgacaagtgggctccttctgtggtgaaaatttcatacaagggaacccctgcc
atgcgtcgctcccttgttcctcagttacggagtggcaaattcaatgtccttttgactact
tatgagtacattataaaagacaagcacattcttgcaaagattcggtggaaatacatgata
gtggatgaaggccaccgaatgaagaatcaccattgcaagttaactcaagtcctgaatact
cactatgtggcccccagaagaattctcttgactgggaccccactgcagaataagctccct
gaactttgggccctcctcaactttctccttcctacaatttttaagagctgcagcacattt
gagcagtggtttaatgccccatttgccatgactggagaaagggtggacttaaatgaagaa
gaaactatactgatcattaggcgtctacacaaggttttgaggccttttttactgaggaga
ttgaagaaagaagtggaatcacagcttcctgaaaaagtcgaatatgtaatcaagtgtgat
atgtcggctctgcagaagattctatatcgccatatgcaagccaaagggatcctcctcaca
gatggttctgagaaagataagaagggaaaaggaggtgcaaagacacttatgaacactatc
atgcaattgagaaaaatttgcaatcacccatatatgtttcagcacattgaggaatccttt
gctgaacacctgggttattcaaatggagtcatcaatggggctgagctgtatcgggcctca
ggaaagtttgagctacttgatcgtattctgccaaaattgagagcgactaatcaccgcgtg
ctgcttttctgtcagatgacgtccctcatgaccatcatggaggattactttgcttttcgg
aacttcctttacctgcgcctggatggcaccaccaagtctgaagatcgtgctgctttactg
aagaaattcaacgaacctgggtcccagtatttcatttttctactaagcaccagagctgga
ggcctgggcttaaatctacaggctgcggatactgtggtcatctttgacagcgactggaat
cctcatcaggatctgcaagcacaagaccgagctcaccgcattggacaacagaacgaggtc
cgggtgctgagactctgtacggtgaacagtgtggaagagaagatcctggcagctgccaag
tataagttgaatgtggaccagaaagtgatccaggcaggcatgtttgatcaaaaatcttca
agccacgagcggagagcattcctgcaggccatactggagcatgaagaggaaaatgaggaa
gaagacgaagtgcctgatgatgagactctgaaccagatgattgctcggcgagaagaagaa
tttgatctttttatgcgtatggacatggaccgtcggcgggaggatgcaaggaatcccaaa
cgcaagcctcgcttgatggaggaagacgagttgccctcctggattatcaaagatgacgca
gaggttgaaagacttacttgtgaagaggaggaggagaaaatatttgggagaggatctcgc
cagcgccgggatgtggactacagcgacgccctcactgagaagcaatggctaagggccatt
gaagacggcaatttggaagaaatggaggaggaagtacggcttaagaagcgaaaaagacga
agaaatgtggaaaaagatcctgcaaaagaagatgtggagaaggctaagaagagaagaggt
cgccctccagctgagaaactatcaccaaatcccccaaaactgacaaaacagatgaatgcc
atcatcgatactgtgataaactacaaagacaggtgtaacgtggagaaggtggccagtaat
tctcagttggaaatagaaggaaacagttcagggcgacagctcagtgaagtcttcattcag
ttaccttcgaggaaagaattaccagaatattatgaattaattaggaagccagtggatttc
aaaaaaataaaggaaagaatccgtaatcacaagtacaggagcttgggtgacctggagaaa
gatgtcatgctcctctgtcacaatgcccagacgttcaacttggagggatcccagatatat
gaagactccattgtcctgcagtcagtgtttaagagtgctcggcagaaaattgccaaagaa
gaagagagtgaagacgaaaccaatgaggaagaggaggaggaagatgaagaggagtctgag
tctgaggcaaaatccgttaaagtgaaaatcaagctcaataagaaagaggagaaaggccga
gataaaggaaaaagcaagaagaggccaaatcgaggaaaagccaaacctgtagtgagtgat
ttcgacagtgatgaagagcaggatgaaaatgaacagtccgaagcaagtgggactgatgat
gagtga
DBGET
integrated database retrieval system
