Suncus etruscus (white-toothed pygmy shrew): 126010795
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Entry
126010795 CDS
T09902
Symbol
PATJ
Name
(RefSeq) inaD-like protein
KO
K06092
InaD-like protein
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04390
Hippo signaling pathway
setr04530
Tight junction
setr05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
126010795 (PATJ)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
126010795 (PATJ)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
126010795 (PATJ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
MPDZ_u10
Motif
Other DBs
NCBI-GeneID:
126010795
NCBI-ProteinID:
XP_049630339
LinkDB
All DBs
Position
6:complement(16130192..16497634)
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AA seq
1934 aa
AA seq
DB search
MPENPATDKLQVLQVLDRLRVKLQEKGDTSQHEKLSLFYETLKSPLFNQILTLQQSIRQL
KGQLNHLPSDCSANFDFSRKGLLVFTDSSIANGNAQRPSASGLFPWAPQPGNEDFTAVIQ
QMAQGRHIEYIDIERPPAGGLGFSVVALRSRNLGEVDIFVKEVQPGSIVARDRRLKENDQ
ILAINHTPLDQHVSHQQAIALLQQTTGSLHLVVARECALTTSASFNLPDTSLPETVHWGH
VEDVELINDGSGLGFGIVGGKSTGVVVRTIVPGGLADRDGRLQTGDHILKIGSTNVQGMT
SEQVAQVLRNCGNSVRMLVARDPVGDISVTPPTPAALPVALPTATHRSSNTDDSTLFETY
NVELIKKDGQSLGIRIVGYIGDSQTGEASGIYVKSIIPGSAAFHNGQIQTNDKIIAVDGV
NIQGFANQDVVEVLRNAGQVVHLTLVRRKAPFSAPPPEQPTDKGSATEPLKTPTLFLGGA
VETETNLDAEDEEMEDKMDSLNMESHSAVEKPERVPDTPENELKSRWENILSHDYEVMVA
TLDTQVADDAELQRYSKLLPIHTLRLGMEVDSFNGHHYISSIVSGGPLDKLGLFQLEDEL
LEVNGVQLYGKSRREAVSFLKEVPPPFTLVCCRRLTDDEEASVDVPRTPIASPLEMETIH
NVDVHPEDEDEDGELALWSPEVKIVQLVKDQKGLGFSILDYQDPLDPTKSVIVIRSLVAD
GVAERSGELLPGDRLVSVNEYYLDNTALANAVEVLKAVPPGIVHLGICKPLVEDDKEEES
HYILSSNTNEDKAEPSGTIHNISSSLILEAPKEFRDEPYFKEELVDESYLRVGTSFQPKQ
NEINSSQEAWEMEEFLTPRLQELGEEREMLVDEEYELYQGCLQSLEQYPPTRESHYGGTQ
WLQKSEPLELQETRSSMSMYPQEMPQYGYSPEHMMKENLDINTLPSMPSEERDNQQGRFD
DLENRHSLTKSSLDLGMVVPGDGPSPGLLAELPAVAQRKEEELRKEEEELTLYQLPRTHN
VPKTSAYTGMLSSRHASHACELPEREEGEGEETPNFSHWGPPRIVEIFREPDVSLGISIV
GGQTIIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHTEAVEA
IKNSGNPVVFVVQSLSPTPRILPNAQNKTNKTTGNQDQGIQQKREKKRGAAPPPMKLPPP
YRAPSDDSEENEEDSVFTNKKIRQRYADLPGELHIIELEKDKNGLGLSLAGNKDRSRMSI
FVVGINPEGPAALDGRMRIGDELLEINNQILYGRSHQNASAIIKTAPLKVKLVFIRNEDA
VSQMAVTPFALPSSSPSSLENQSSPEPPSCEEDGSLDVGIKPLSESESSRQEDASPVAGQ
GVLADPRRTPECTADHTPGTARCLTASTRIFQLGLGSLANYRSRRQAVSQMKQQKYSAKV
SFNPQEIPLAPSSSYPSPDAELTGYGSFQAPLSVDPATCPIIPGQEMIIEISKGQSGLGL
SIVGGKDTPLDAIVIHEVYEEGAAARDGRLWAGDQILEVNGTDLRSASHEEAITALRQTP
QKVRLVVYRDEAHYRDEENLEVFPVDLQKKTGRGLGLSIVGKRNGSGVFISDIVKGGAAD
LDGRLIQGDQILSVNGEDMRSASQETVATVLKCAQGLVQLEIGRLRAGSWTSSRKTSQNS
QGTPCSTSHSGFPPAITPVRTSLQNLVSTKKASDPSPQNSGSDTGPRTVEIIRELSDALG
ISIAGGKGSPLGDIPIFIAMIQASGVAARTQKLKVGDRIVSINGQPLDGLTHTDVVNVLK
NAYGRIILQVVADTNISAIASHFETMTTGHQPSSPTSDQHPEDSEIPEPKFITLEKGSEG
LGFSIVGGYGSPHGDLPIYVKTIFAKGAAADDGRLKRGDQILAVNNETLEGVTHEQAVAI
LKRQRGTVTLTVLS
NT seq
5805 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaaatcctgccacagataaattgcaggtcctgcaagttcttgatcgtctgaga
gtgaaactgcaggagaagggggatacgtcacagcatgaaaaactgtctctgttttatgaa
acgctcaagagtcccctcttcaaccagatactcacacttcagcagtccatccggcagctg
aaggggcaactcaaccatttgccctcagattgttcagccaactttgatttttcaagaaaa
ggtctgttagtgtttacagacagctccattgctaatgggaatgcccagaggccttctgca
tctgggctgtttccttgggccccccagcccggaaatgaagactttactgcagtcattcaa
cagatggctcagggccgacacattgaatatatagatatagaacggcctccagcgggagga
cttggattcagcgtggtggcccttcgcagccggaacttgggagaggttgatatcttcgtg
aaagaagtacagcctgggagcatcgtggccagagatcggaggttaaaggaaaatgaccag
atactggctattaaccacacaccgctggatcagcatgtttcccatcagcaggccattgca
ttgttgcaacagaccactgggtctttgcacctcgttgtcgccagagaatgtgccctcaca
actagtgcttctttcaacctccctgatacgagtctgccagaaacagttcattggggccat
gttgaagatgttgaactcattaatgatggctccgggttaggttttggaatagttggggga
aaatcaacaggtgtggttgtgaggactatcgtgcccggaggactagcagatcgagatggc
agactccagacaggtgatcacatcttgaagatcggctccacaaatgtgcagggaatgacc
agcgagcaagttgcccaagtgctgagaaattgtgggaattctgtcaggatgcttgtggcc
agagacccagtcggggacatttctgtaactcctccaacccccgcagctttaccagttgct
ttgccaactgcaacccacaggagctctaatactgacgactccactctttttgaaacttac
aatgttgaactcattaaaaaagatggacagagtcttgggattcgaattgtaggctatatt
ggagactctcaaaccggggaagcttcagggatttatgtgaaaagtataatacctggcagt
gctgcattccacaatggccaaattcaaacgaatgacaaaataattgctgtggatggcgtg
aatattcagggctttgccaaccaagatgttgtggaagttttacgcaatgcagggcaagtg
gttcatctcaccctcgttcgaagaaaggctccattttctgcccctccaccagagcagcct
acagacaaagggagtgctactgaacctctgaagacaccaaccctctttctgggtggagca
gtggagacagaaactaacctggatgctgaggatgaggagatggaagacaaaatggacagt
ctgaacatggaaagtcactctgcagtagagaaaccagaaagagtcccagacactccagaa
aatgagctgaaatccagatgggaaaacatattgagccatgattatgaagtaatggttgca
actttggacacgcaagttgctgatgatgctgaattacagagatattccaagctgctgccc
attcacacgctgaggcttggcatggaagtggattcctttaacgggcaccactacatttct
tcgattgtctcgggaggtcctcttgataagctgggcctcttccagctagaagatgagctt
cttgaggtcaacggtgtccagctatatgggaagtcacgccgagaagccgtctccttcctc
aaggaagtgccaccccctttcactttggtttgctgtcggcggttaactgatgatgaggag
gcctcagtggacgtgcccaggaccccgattgcctctcccctggagatggagaccatccac
aatgtcgatgtccatcctgaagatgaggatgaagatggagagttagcactctggtcgcct
gaagtcaagattgtccagttagtaaaagatcagaaaggcttaggattcagcattttggat
taccaggatcccttagaccccacaaagtcagtgattgtgatccgctccttggtggcagat
ggtgtcgcagaaagaagtggggagctattaccaggggaccgtttggtgtcagtcaatgag
tactatttggacaacaccgcacttgcaaatgctgtggaagtgttgaaagctgttccacca
ggcatagtgcaccttggcatctgtaaacctttagtggaagatgataaagaggaagaaagt
cattatattttgtcctccaacactaatgaagataaagctgaaccttcaggaacaattcat
aacataagttcatctttaatacttgaagcacccaaggaatttagagatgagccttatttt
aaagaagagcttgtggatgagtcctatctccgtgtggggacctcatttcaaccgaagcaa
aacgagatcaacagcagccaagaggcctgggagatggaagaattcttgactcctcggttg
caggaactgggagaagaaagagaaatgcttgttgatgaagaatatgagctctatcagggt
tgcttgcagtccctggagcagtacccccctacgagggaaagtcattatggtggtacccag
tggttacagaagagtgaacccctagaactacaggaaacaagatcctcgatgagcatgtat
ccccaggagatgccgcagtatggctacagccctgaacacatgatgaaagaaaatttggac
atcaataccctcccctccatgccatctgaggaacgagacaatcaacaaggcagatttgat
gatctggaaaatcgtcattcattaaccaaaagcagcttggatttaggcatggtggttcca
ggtgatggcccaagccctggcttgcttgctgagcttcctgctgtggctcaaagaaaggag
gaagaactgagaaaggaggaagaagaactgactttataccaacttcccaggacccacaac
gtgcccaagacctcagcatacacaggaatgttatcttctagacatgcctcacatgcatgt
gagttacccgagagagaagaaggtgaaggagaagagaccccaaacttcagccattggggt
ccaccaagaatcgtggaaatttttagggaacccgacgtgtctctgggtattagcatcgtt
ggtggacaaaccatcataaaacgcctgaagaatggggaagagcttaaaggaatcttcatc
aaacaagttttagaagacagtccggcaggaaagacaaatgctcttaaaactggagataaa
atactcgaggtgtctggcgtggatctgcagaacgcatcccacacagaggctgtggaagcc
atcaagaactccggaaaccctgtggtgtttgtggttcagagcttgtcgcccaccccgaga
atcctcccaaatgcgcagaacaagactaacaaaactactggtaaccaagaccaaggcatc
caacaaaagagagaaaagaaacgaggagctgctccgccaccaatgaaattgcctccaccc
tatcgagctccatctgatgacagtgaggaaaatgaagaagactccgtatttactaacaaa
aaaatcaggcaaagatatgcagacctgcctggagaattacacatcattgaacttgaaaag
gataagaatggacttgggctcagtcttgctggtaataaggaccggtcacgcatgagtatc
tttgtggtgggaattaacccggaaggacccgctgccttggatggaaggatgcggattgga
gatgagcttttagagataaacaatcagatcctctatggaagaagtcaccaaaatgcatct
gccattattaagactgcccctctgaaagtcaagctggtttttatcagaaatgaagatgca
gtcagccagatggctgtgacaccctttgcgttgccatcaagttcgccatcgtctctagag
aatcagagcagccctgagccccccagttgtgaggaagatggcagccttgatgtgggcatc
aaaccgttatctgaaagtgaaagctccagacaggaggatgcctccccggtggcaggacaa
ggagtgctggctgacccacgaaggacccctgagtgcacagcagaccatactccagggaca
gcccgttgcctcactgcttccaccagaatcttccagcttggcctaggttccctggctaac
tacagatccagaaggcaggctgtcagccagatgaaacagcaaaagtattctgcaaaggtc
tccttcaatccacaagagatccctttagcaccaagttcatcatatccatcaccagatgca
gaactcacaggctatggcagtttccaggctcctctttcggttgaccccgccacgtgtcca
atcatccctggccaggaaatgattatagaaatatccaaggggcagtcaggacttggtctc
agcatcgtgggaggaaaagacacacccttggatgctattgttatacacgaagtctatgaa
gaaggagcagccgccagagatggaagactttgggctggtgaccagatattagaggttaat
ggtaccgacctgcggagcgccagtcatgaggaggccatcactgcgctgaggcagacccca
cagaaggtgcggttggtggtgtaccgagacgaggcgcattacagggatgaggagaacctg
gaagtcttccccgtggatctgcagaagaagacgggtcgtggacttggcctgagcatcgtg
gggaaacgaaacggcagcggcgtgtttatctctgacattgtgaaggggggcgctgcagat
ctggatgggagattgatccagggtgatcagatcttatctgtaaatggggaggatatgaga
agtgcatcccaggagactgttgccacagttctcaagtgtgcacaggggcttgtgcagcta
gagatcggaagactccgagctggttcctggacctcctcgagaaagacatcacaaaacagt
caggggactccatgcagcacttcacacagcggcttcccacctgccatcactcccgtccgc
accagcctgcagaacctggtcagcaccaaaaaagcatcagatccatcccctcaaaattca
ggcagcgatacaggaccaagaactgttgagataataagggagctcagcgatgcccttgga
atcagtattgcaggaggcaaaggaagccccttaggagatattcctatatttattgccatg
atccaggccagtggtgtggctgctcggacacagaagctgaaagttggagaccggattgtc
agcattaatgggcaacctctggatgggctgactcacaccgacgtggttaatgtgctgaaa
aatgcatacgggcgcattatcctacaggttgtagcagacaccaacataagtgccatcgct
tctcacttcgagaccatgacaacgggccaccaacccagttcccccacctctgaccagcat
cccgaagactccgaaatacctgaacctaagtttataactctggagaaaggatccgaagga
ctggggtttagcattgtaggggggtacggaagcccccatggagacctgccgatttatgtc
aagactatatttgcaaagggcgccgccgctgatgatggccgcttgaagcgaggggatcag
atcttagctgtgaacaacgagaccctggaaggggtgacccatgaacaagcagtggccatt
ctaaaacgccagcgaggaaccgtcaccttgacggtgttgtcttga
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integrated database retrieval system
