Suncus etruscus (white-toothed pygmy shrew): 126010811
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Entry
126010811 CDS
T09902
Symbol
ATG4C
Name
(RefSeq) cysteine protease ATG4C
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04136
Autophagy - other
setr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
126010811 (ATG4C)
04136 Autophagy - other
126010811 (ATG4C)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
setr01002
]
126010811 (ATG4C)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126010811 (ATG4C)
03029 Mitochondrial biogenesis [BR:
setr03029
]
126010811 (ATG4C)
Peptidases and inhibitors [BR:
setr01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
126010811 (ATG4C)
Membrane trafficking [BR:
setr04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
126010811 (ATG4C)
Mitochondrial biogenesis [BR:
setr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
126010811 (ATG4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
126010811
NCBI-ProteinID:
XP_049630369
LinkDB
All DBs
Position
6:complement(15436389..15525064)
Genome browser
AA seq
458 aa
AA seq
DB search
MEATGTDEVDKLKTKFISAWNNMKYSWVLKTKTYFSRNSPVLLLGKCYHFKYEDENKLLP
ARSGSTIEDHVVAGNVEEFRKDFISRIWLTYREEFPQIEGSALTTDCGWGCTLRTGQMLL
AQGLILHFLGRAWTWPEALNIENSDSDSWTSQTVKKLAASFEASLSEERGPKNPTISRKE
PIGRNSDEREIQNEMYHRRIVSWFGDSPLALFGLHQLIEYGKKSGKRAGDWYGPAVVAHI
LRKAVEEARHPDLQGLTVYVAQDCTVYSSDVIERQCPSMASDNRDDKAVIILVPVRLGGE
RTNVDYLEFVKGILSLEYCVGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDF
PLETFHCPSPKKMSFRKMDPSCTVGFYCRNVQDFWRVSEEITKMLKISSKEKYPLFTFVN
GHSRDYDFTSTTTSEEDLFSEEEKKRLKRFSTEEFVLL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggaggccacaggaacagatgaagtcgacaagctgaaaactaaatttatatctgcttgg
aacaacatgaaatatagttgggtattgaaaacaaagacatattttagtagaaattccccc
gttttattgcttggaaaatgttaccattttaaatatgaagatgaaaacaaactgttgcct
gcacgatcaggaagcacaatagaagatcacgtagttgcaggaaacgtcgaagaattccgt
aaagatttcatttcgagaatatggctgacctacagggaagaatttcctcaaatcgaaggc
tcagctctgacaacagactgtggttggggctgtacgctgaggactggccagatgctcttg
gctcaaggactcatactgcacttccttggcagagcttggacctggcctgaagctttgaac
attgaaaattcagactctgattcttggacttcccaaactgtaaaaaaattggccgcatct
tttgaggcatcactctccgaggaaaggggaccaaagaaccccaccatttctcggaaggaa
ccaattgggagaaactctgatgaacgggaaatccaaaacgaaatgtatcacaggagaatt
gtctcctggtttggtgactcccccttggctctctttggtttgcatcagctcatagaatat
gggaaaaagtctggcaaaagagctggagattggtacggaccagctgtggtagctcacatt
ttaagaaaagcagttgaagaagcaagacaccctgatttacaaggactaacagtttatgtt
gcacaagactgtacagtttacagttctgatgtaattgaaaggcagtgtccctcgatggcc
tctgataacagagatgacaaagcggttattattctagttcctgtcagactcggtggagaa
agaaccaatgttgactacttggagtttgtaaagggaattttaagcctggaatattgtgtg
gggattataggcggcaaacctaaacagtcatattactttgccggatttcaagatgacagt
ttgatttacatggatcctcattactgccagtcttttgtagatgtcagcataaaggatttc
cctcttgagacattccactgtccttctcccaaaaagatgtccttccggaaaatggaccca
agctgcactgtcggattttattgtcggaatgttcaggatttctggcgagtttcggaagaa
atcactaagatgctgaaaatttcttctaaggagaaatatcccttgtttacatttgtgaac
ggccattccagagactatgattttacatcgactaccaccagtgaagaagaccttttttca
gaggaagaaaagaaaaggttgaaacgatttagcacggaggaatttgttttgctttag
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