Suncus etruscus (white-toothed pygmy shrew): 126010824
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Entry
126010824 CDS
T09902
Symbol
CALD1
Name
(RefSeq) caldesmon isoform X1
KO
K12327
caldesmon
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
126010824 (CALD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
setr04812
]
126010824 (CALD1)
Cytoskeleton proteins [BR:
setr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
126010824 (CALD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
126010824
NCBI-ProteinID:
XP_049630387
LinkDB
All DBs
Position
1:144188700..144298870
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AA seq
740 aa
AA seq
DB search
MDDFERRRELRRQKREEMRLEAERIAYQRNDDDEEEAARERRRRARQERLRQKQEEDSLG
QVTTDQMEVNAQNSVSNEEVKAPSTHTQVEDDDEAAFQERLARREERRQKRLQEALERQK
EFDPTITDAGMSLPSRRTINSTEDNENAEKEEKHESRQERYVLEESITKSYQKNDWREAE
VPKKEEKAKEEEEEKPKPGSMEDNQVEVIVDEKPAEPQEETVVMALNNGQVNEEEMRAKT
GEQDFDEVIHNERMEEEEREKAEAERIRLEAEERERIQVEQEQKLAEEKARREAEEKAAA
QERERREAEERKRREEEERRAAEERQRIQAEEAEKAKREEQKFQQQLEEKKQDRKEEING
GKVGMKIEGKWVNEKKAPEDKLQTAVPKKQEEEKGSKVPAKRQQSQEDKSSFKKEVKEEK
MKKDKEPKEEGKSFLDGKKGLTEVKSQNGEFMTHKLRPTENTFSRPGARASEAKEAEEAG
KRLEELRRRRGETESEEFEKLKQKQQEAALELEELKKKREERRKVLEEEEQRRKQEEAER
KVREEEEKRRLKEEIGRRRAEAAEKRQKMPEDNSSDDKKPFKCFTPKGSSLKIEERAEFL
NKSVQKSSGIKSTHQAAVVSKIDSRLEQYTSAIEGTKSAKPTKPAASDLPVPAEGVRNIK
SMWEKGNVFSSPSASGTPNKETAGLKVGVSSRINEWLTKTPDGNKSPAPKPSDLRPGDVS
GKRNLWEKQSVDKVTSPTKV
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggatgactttgaacgacgcagggagctgagaaggcaaaagcgagaagaaatgcgcctg
gaagctgaaagaatcgcttaccagaggaatgatgatgatgaggaagaggctgcccgggaa
cggcgtcgccgggcccgccaggaaaggcttaggcagaaacaagaagaagattccttgggg
caggtgaccaccgaccagatggaagttaatgcccagaacagtgtgtctaatgaggaggtc
aaggcacccagcacacacacccaggtggaagacgatgatgaggctgcattccaggagcgc
ttggctcggcgggaggagagacgtcagaagcgcctgcaggaagctctggagcggcagaag
gagttcgaccccacaataacagatgcaggcatgtcactgccaagccgcagaacaatcaat
agtacagaagacaacgaaaatgctgagaaagaagaaaagcatgaaagtcgccaagagaga
tatgtgctagaagaaagcatcaccaaatcctatcagaagaatgactggagagaggctgaa
gttccaaagaaagaagaaaaagcaaaggaggaagaggaggagaagccaaaaccagggagc
atggaagataatcaggtagaagtgatagtagatgaaaaaccagcagaaccccaggaggaa
acggtggtaatggcattgaataatgggcaggtaaatgaggaagagatgagggcaaagaca
ggggaacaggattttgatgaggttattcacaatgaaaggatggaagaagaagaaagggag
aaagctgaggcagaaaggatcaggttggaagcagaagaaagagaaagaattcaagttgag
caagagcaaaaactagcagaggagaaagccagaagggaagcagaggaaaaagcagctgca
caagaaagagaaaggagggaagcagaagagaggaagaggagggaggaggaggagcgaagg
gcagcagaagagaggcagagaattcaggcagaggaagcagagaaagctaagagggaggag
cagaaattccagcagcagctagaagagaaaaaacaggacaggaaagaggagatcaatggg
ggaaaggtgggcatgaaaatagaagggaaatgggtcaatgaaaagaaagctccagaagat
aaactgcagacagctgtcccaaagaaacaggaagaagagaaagggtctaaagtgccagct
aaaagacaacagtcccaggaagacaagtcttccttcaaaaaagaggtcaaagaggagaag
atgaaaaaggacaaagagcccaaggaagaggggaagagtttcttggatgggaagaaggga
ttaacagaagtcaagtcccagaatggagagttcatgacccacaaactcagacccactgag
aatactttcagccgacctggagcaagagccagcgaggccaaggaggcagaggaggctggg
aagcggctggaggaacttcgccgccgccggggagaaaccgagagcgaagagtttgagaaa
ctcaagcagaaacagcaggaggcggccctggagctggaggagctgaagaagaagagggag
gagcgaaggaaggtcctggaggaggaagagcagcggaggaagcaggaggaggccgagcga
aaagtcagggaggaggaagagaagaggagactaaaggaagaaattggaagacgaagagca
gaagcagctgagaagcgtcagaaaatgccagaagacaactcatcagatgacaagaaacca
ttcaaatgtttcactcctaaaggttcatctctcaagatagaagagcgagcagaatttttg
aataagtctgttcagaaaagcagtggtatcaagtcaactcatcaagcagctgttgtctcc
aagattgacagccgacttgagcagtacaccagtgcaattgaggggacaaaatctgccaaa
cctacaaagccagcagcctcagatcttcccgttcctgccgaaggagttcgtaatatcaag
agcatgtgggaaaaaggaaatgtgttctcatccccttctgcctcaggcacacccaacaag
gaaactgcaggcctgaaggtgggtgtttccagccgtatcaatgaatggctcactaaaact
ccagatggaaataagtcacctgctcccaaaccttctgatttgcggccaggagatgtatct
ggcaagaggaacctctgggaaaaacagtctgtggataaggtcacttctcccacaaaggtt
tga
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