Suncus etruscus (white-toothed pygmy shrew): 126011002
Help
Entry
126011002 CDS
T09902
Symbol
ZBTB40
Name
(RefSeq) zinc finger and BTB domain-containing protein 40
KO
K10512
zinc finger and BTB domain-containing protein 40
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
126011002 (ZBTB40)
04121 Ubiquitin system [BR:
setr04121
]
126011002 (ZBTB40)
Transcription factors [BR:
setr03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
126011002 (ZBTB40)
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
126011002 (ZBTB40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
BTB
Zf-C2H2_ZNF451_C
XAF1_C
zf-C2H2_PRDM15
zf-met
zf-C2HC_2
BTB_KLHL33
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
126011002
NCBI-ProteinID:
XP_049630588
LinkDB
All DBs
Position
6:complement(54641951..54720774)
Genome browser
AA seq
1237 aa
AA seq
DB search
MELPNYSRQLLQQLYTLCKEQQFCDCTISIGTIYFRAHKLVLAAASLLFKTLLDNTDTIS
IDASVVSPEEFALLLEMMYTGRLPVGKHNFSKIISLADSLQMFDVAVSCKNLLTSLVNCS
VQGQVVRDNPMPSSESLQKETERLEAESLSCDGAREPCASLELSAQAGTPGRVGMEESVP
PVVQDMSMDPSTFQELQGNASAPVKVPRTTGVCSPPPVAIACKKAKEASLEPEHERKHYQ
LTFLLENEAIFSDALLTTQNVLKRLDCSEIKSAQKEAIMGCLEGEDGHSIFQRLLAKVKD
ESLDPEALVSLLRLYQDSNPAVKAAFSDRKSEDVAVATKGGTEEGKTLSVLLLQHKEDLV
QCVTQLRPIVEFLETTKEGFLTDSEKQVILNCCEGRTPKETIENLLHRMSEEKTLTAESL
VKLFQAVKMAFPKLGLLLGNLQKSATLPSTTVHASPDDYGTELLRRYHENLSEIFTDNQV
LVKMIQRVKDLTPEEKEVMEMLVRCETGAGAFNALMSAAMEKQTLSATTVWQLLLAAQEM
EPCPWRLLLEEIQKEPGAQAFFRTVRPLESTALEAILRHHRRILEALRQRTEQKSFTPEE
EQLAEAVTEILSISLETVSPEVSLKAVLSKATEKSISAIEICHLLCVTHTSVPDLQPVMQ
ELASAGFLTQEIGEERWKVRTKFHPEANNVDEKAAELTDVACQAGNQNDQAEPGSLPGQD
KDTSASPDSAKKSFICKACDKSFHFYCRLKVHMKRCRVAKSKQIQCKECNETKESKKELE
KHQLEAHSIGGEPGAPKKKKKRLPVTCDLCGREFAHASGMQYHKLTEHFDEKPFSCEECG
AKFAANSTLKNHLRLHTGDRPFMCKHCLMTFTQASALAYHTKKKHSEGKMYACQYCDAVF
AQSIELSRHVRTHTGDKPYVCRDCGKGFRQANGLSIHLHTFHNIEDPYDCKKCRMSFPTL
QDHRKHIHEVHSKEYHPCPTCGKIFSAPSMLERHMVTHVGGKPFSCGICNKAYQQLSGLW
YHNRTHHPDVFAAQNHRSSKFSSLQCSSCDKTFSNTIEHKKHIKAEHADLKFHECDHCKE
LFPTPALLQVHIKCQHSGSQPFRCLYCSATFRFPGALQHHVTTEHFKQSENTFPCELCGE
LFTSQAQLHSHLDSEHPRATSMETPATTSQMVQVIQSPEPAAPTEQVITLEETQLAGSQV
FVTLPDSQTPQSSSELVAVTVEELLDGTVTLICGEAK
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggagctccccaattacagtcgacagctgctgcagcagctgtacaccctgtgcaaggag
cagcagttttgtgactgcaccatctccattggtaccatctacttccgggcccacaagctg
gtcttggcggctgccagcctcctgttcaaaaccctgctggacaacactgacaccatctcc
atcgatgcatcggtggtgagcccggaggagtttgccctcctgttggaaatgatgtacacc
ggcagactcccagtgggcaagcacaatttctccaagatcatctcattggccgatagcctt
caaatgtttgatgtggctgttagttgtaaaaatcttctgaccagcctcgtaaattgctct
gtgcaggggcaggtggtgagggacaaccccatgccatcctcagagtccttgcagaaagaa
actgaaagactagaagcagaaagcctcagctgtgatggcgccagagagccttgtgcatcc
ctcgagctctctgcccaggcagggacccctgggagagtgggaatggaggaatcggttcct
cctgttgtacaggacatgagtatggatccttccaccttccaggagctccagggcaatgcc
agcgctccagtgaaggttcctcggaccacaggagtttgttccccaccccctgttgctata
gcatgtaagaaggcaaaggaggcaagtctggaaccagagcatgagaggaaacactaccag
ctgacctttcttctagaaaatgaagctatcttctcagatgcactgctgaccacccagaat
gtcttaaaaagactagactgctcagaaatcaaaagtgcccagaaggaggccataatgggg
tgtcttgagggcgaagatggacattccattttccagaggcttctggctaaagtaaaggat
gagagcttggatcctgaggcccttgtgtccctgctgaggctgtaccaagattctaatcct
gcagtcaaggcagcattttcagacagaaaatcagaagatgtagcagtggcaacaaaaggg
ggcacagaggagggaaagaccttgtctgtcctgttactccaacacaaagaggacctggtc
cagtgtgtgacacagctgaggccgatcgtggagttcctggaaaccaccaaggagggattt
ctgacagactctgagaagcaggtgattctgaattgctgtgagggcagaacacccaaggag
accatagaaaatttgttgcacagaatgtctgaagagaagactctgactgctgagagtttg
gtaaaactctttcaagctgtgaagatggcattcccaaagttaggtcttctgctgggaaat
ttgcagaaatccgccactttgccgagcaccacagttcatgcaagccctgatgattacggg
accgagctattgagacgatatcacgaaaacctctccgagattttcacagacaaccaggtg
ttagtgaaaatgatccaacgtgtgaaggacttaacccctgaagaaaaggaggtcatggag
atgctggtaagatgtgagacgggtgcaggggccttcaatgctctgatgtcagcagccatg
gagaagcagaccctctctgccaccactgtgtggcagctgctgctggcagctcaggagatg
gagccctgcccatggcgcctgctcttggaggagatccagaaggagcctggtgcccaggct
ttcttccggacagtgaggccgctggaaagcacagccttagaagccatcctgaggcatcac
agacggatcctagaagctctccgacaaaggactgaacagaagtccttcacaccagaggag
gagcagctggcagaggcagtgacagagattctgagcatttccttggagacagtcagccct
gaagtttccctgaaagcggtgctgagcaaagccacagagaaatccatctcggccattgaa
atatgtcacctcctgtgcgtcacccacacatctgtcccagacctgcagcctgtcatgcag
gaattagcatctgctggtttccttactcaggagattggggaggagcggtggaaggtgagg
actaaatttcatcctgaagccaacaatgtggatgaaaaggcagctgagctcactgacgta
gcatgccaagctgggaaccagaatgaccaggcggagcctggttccttgccaggacaagac
aaagacacttctgcctccccagactctgccaagaagagcttcatctgcaaggcctgtgac
aaaagcttccatttctactgccgcctcaaggttcacatgaagcgctgccgggtggccaag
agcaagcagatccagtgtaaggagtgcaatgagaccaaggagtcgaaaaaagagctggag
aagcatcagctggaggcccacagtatagggggtgagcctggggctcccaagaagaagaag
aagagacttcctgtgacctgtgacctctgtggaagggagttcgctcatgcctcaggcatg
cagtatcataaactgacagaacactttgatgagaagcctttctcctgtgaagagtgtggt
gccaagtttgcagccaactcaactctgaagaaccaccttcgccttcacactggggaccgt
ccgttcatgtgcaagcactgcctcatgaccttcacccaggcctcagctctggcctaccac
acaaagaaaaagcactcagaagggaagatgtacgcatgccagtactgcgatgctgtattt
gcccagtccattgagctgtcccgtcacgtgaggacacacactggggacaagccctatgtc
tgcagggactgtggcaagggcttccggcaagccaacggcctctccatccatctgcatacc
tttcacaacatagaagacccctatgactgtaagaagtgcaggatgagcttccccacactg
caggaccaccgcaaacacatccatgaggtgcactccaaggagtatcacccctgccccaca
tgcgggaagatcttcagtgctccctccatgctggagagacacatggtcacccatgtcggg
gggaagcccttcagctgtgggatctgtaacaaggcctaccagcaattgtctggtttatgg
tatcacaatcggacccaccaccctgatgtgtttgctgctcagaaccatcgatcctccaag
ttctcctcactccagtgcagctcctgtgacaaaaccttctccaacaccattgagcacaag
aagcacatcaaagctgagcatgcagacctgaagttccatgaatgtgatcactgcaaggag
ctcttccctacaccagcactgctccaggtccacatcaagtgccagcactcagggtctcag
cctttccgctgcctgtactgttcagccacatttcgcttccctggggcactgcagcaccat
gtgactacagagcacttcaagcagtctgaaaataccttcccctgcgagctctgtggggag
ctcttcacctctcaggcccagctgcacagccacctggactccgagcacccaagggccacc
agcatggagactccagccaccacctcccagatggtgcaggtgatccagagtccagagcca
gcggcccccacagagcaggtgatcacgctggaggagacccagctggctggctcgcaggtg
tttgtcaccttgccagactcacagacaccccagagcagctctgagctggtggctgtgact
gtggaggaactgctggacggtactgtgaccctgatttgcggggaggccaagtga
DBGET
integrated database retrieval system
