Suncus etruscus (white-toothed pygmy shrew): 126011027
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Entry
126011027 CDS
T09902
Name
(RefSeq) protein argonaute-1 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126011027
03036 Chromosome and associated proteins [BR:
setr03036
]
126011027
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
126011027
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
126011027
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
126011027
microRNA pathway
RISC loading complex
126011027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
126011027
NCBI-ProteinID:
XP_049630636
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All DBs
Position
6:complement(41449723..41503222)
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AA seq
870 aa
AA seq
DB search
MEAGPSGAAAGTYLPPLQQVFQAPRRPGIGTVGKPIKLLANYFEVDIPKIDVYHYEVDIK
PDKCPRRVNREVVEYMVQHFKPQIFGDRKPVYDGKKNIYTVTALPIGNERVDFEVTIPGE
GKDRIFKVSIKWLAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMRYTPVGRSFF
SPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRN
IDEQPKPLTDSQRVRFTKEIKGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLESGQ
TVECTVAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS
TMIKATARSAPDRQEEISRLMKNASYNLDPYIQEFGIKVKDDMTEVTGRVLPAPILQYGG
RNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKNFTDQLRKISKDAG
MPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVYAEVKRVGDTLLGM
ATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRSAVFQQPVIFLGADVTHPP
AGDGKKPSITAVVGSMDAHPSRYCATVRVQRPRQEIIEDLSYMVRELLIQFYKSTRFKPT
RIIFYRDGVPEGQLPQILHYELLAIRDACIKLEKDYQPGITYIVVQKRHHTRLFCADKNE
RTFYKASSSQQPCEIGKSGNIPAGTTVDTNITHPFEFDFYLCSHAGIQGTSRPSHYYVLW
DDNRFTADELQILTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKEHDSGEGSH
ISGQSNGRDPQALAKAVQVHQDTLRTMYFA
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgggaccctcgggagcagctgcgggcacctacctgccccccctgcagcaagtg
ttccaggcacctcgccggcctggcattggcactgtgggaaaaccaatcaaactcctggcc
aattactttgaggtggacatccctaagattgacgtctaccactacgaagtggatatcaag
ccggataagtgtcctcgcagagttaaccgggaagtggtggaatacatggttcagcatttc
aagcctcagatctttggtgatcgcaagcccgtatatgatggaaagaagaatatctacact
gttacagcactgcctattggaaatgagcgggttgactttgaggtgactatccctggggaa
gggaaggatcgaatcttcaaggtgtccatcaagtggctagccattgtgagttggcgaatg
ctgcatgaggccctggtcagtggccagatccctgttcccttggagtctgtgcaagccctg
gatgtggccatgaggcacctggcatccatgaggtacacccctgtgggccgctccttcttc
tcaccgcctgagggctactaccacccgctggggggtgggcgcgaggtctggttcggcttt
caccagtctgtgcgccctgccatgtggaagatgatgctcaacattgacgtctcagccact
gccttctataaggcacagccagtgattgaattcatgtgtgaggtgctggacatcaggaac
atagatgagcagcccaaacccctcactgactctcagcgtgtgcgtttcaccaaggagatc
aagggtttgaaggtggaagtgacccactgtgggcagatgaagaggaaataccgagtgtgt
aatgtcacccgccgccctgctagccatcaaacgtttcccttgcagctggagagtggacaa
accgtggagtgcacagtagcacagtacttcaagcagaaatacaaccttcagctcaagtat
ccccacttgccctgcctgcaagttggtcaggaacaaaagcatacctacctacccctagag
gtctgtaacattgtggctggtcagcggtgcattaagaagctgactgataaccagacttct
accatgataaaggctacagctaggtcggctccagacagacaagaggaaatcagccgcctg
atgaagaatgccagctacaacctagatccttacatccaggaatttgggatcaaagtgaag
gatgatatgacggaggtgacagggagagtgctgccggcgccgatcttgcagtacggcggc
cggaaccgggccattgctacacccaatcagggagtctgggacatgcgggggaaacagttc
tacaatgggattgagatcaaagtctgggccatcgcctgcttcgcaccccaaaagcagtgt
cgagaagaggtgctcaagaacttcacagatcagcttcggaagatttccaaggatgcagga
atgcctatccagggccaaccttgcttctgcaaatatgcacaaggagcagacagcgtggag
cctatgttccggcatctgaagaatacttactcagggttgcagctcattatcgtcattcta
ccagggaagacgccagtgtatgctgaggtgaaacgtgttggagacacgctcttgggaatg
gctacacagtgtgtccaagtgaagaacgtggtcaagacctcacctcagactctgtccaat
ctctgcctcaagataaatgtcaaacttggtggcattaacaatatcttagtcccacaccag
cgctctgccgtctttcaacagccagtgatattcttaggagcggatgttacacacccccca
gcaggagatgggaaaaaaccttctatcacagcagtggtaggaagtatggatgctcacccc
agccgttactgtgctactgtgcgagttcagcgaccacggcaggagatcattgaagactta
tcctacatggtgcgtgaattgctcatccagttctacaagtccactcgattcaagcccacc
cgcatcatcttctaccgagatggggttcctgaaggccagctgccccagatcctccactat
gagctgttggccatccgtgatgcctgcatcaaactggagaaggactaccaacctgggatc
acatatattgttgtgcagaaacgccaccatacccgtcttttttgtgctgacaagaatgag
cgtactttttacaaggcatcttcctcacagcagccctgtgagattggaaagagtggtaac
attcccgctgggaccactgtggacaccaacatcacccatccttttgagtttgacttctat
ctctgcagccacgcaggcatccagggcaccagtcgaccatcccattactatgttctttgg
gatgacaaccgtttcacagcagatgagctccaaatcttgacataccagttgtgccacact
tacgtacgatgcacacgctccgtttctatcccagcacctgcctactatgcccgtctggtg
gcttttcgggcacgataccacctagtggacaaggagcatgacagtggagaggggagccac
atatcggggcaaagcaatgggcgggacccccaggccctggccaaagccgtgcaagttcat
caggatactctgcgcaccatgtacttcgcttga
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