KEGG   Suncus etruscus (white-toothed pygmy shrew): 126011052
Entry
126011052         CDS       T09902                                 
Symbol
WDTC1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1 isoform X1
  KO
K11807  WD and tetratricopeptide repeats protein 1
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:setr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:setr04121]
    126011052 (WDTC1)
Ubiquitin system [BR:setr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     126011052 (WDTC1)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML TPR_19 Beta-prop_WDR75_1st TPR_2 TPR_17 TPR_1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_RFWD3 TPR_11 Beta-prop_SPT8 Beta-prop_HPS5 ANAPC3 TPR_16 TPR_14 Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N TPR_6 NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_SCAP Barstar
Other DBs
NCBI-GeneID: 126011052
NCBI-ProteinID: XP_049630679
LinkDB
Position
6:complement(49890147..49961125)
AA seq 677 aa
MAKVNITRDLIHRQIKEQGALSFERRYHVTDPFIRRLGLEAELQGHSGCVNCLEWNEKGD
LLASGSDDQHTIVWDPLHHKKLLSMHTGHTANIFSVKFLPHAGDRILITGAADSKVHVHD
LTVKETIHMFGDHTNRVKRIATAPMWPNTFWSAAEDGLIRQYDLRENSKHSEVLIDLTEY
CGQLVEAKCLTVNPQDNNCLAVGASGPFVRLYDIRMIHNHRKSMKQSPSAGVHTFCDRQK
PLPDGAAQYYVAGHLPVKMPDYNNRLRVLVATYVTFSPNGTELLVNMGGEQVYLFDLTYK
QRPYTFLLPRKCHSSGEVQNGKMTTNGVSNGVSNGLHLHSNGFRLPETRGHVSPQIELPP
YLERVKQQANEAFACQQWTQAIQLYSKAVQKAPHNAMLYGNRAAAYMKRKWDGDHYDALR
DCLKAISLNPCHLKAHFRLARCLFELKYVAEALECLDDFKGKFPEQAHSSACDALGRDIT
AALFSKNDGEEKKGAGGGPVRLRSTSRKDSISEDEMVLRERSYDYQFRYCGHCNTTTDIK
EANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPHPSYCFLATSGID
PVVRLWNPRPESEDLTGRVVEDMEGASQANQRRMNADPLEVMLLNMGYQIAGLSSAGGAG
ASDDEDSSEGQVQCRPS
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggcaaaagtcaacataactcgagacctcatccataggcagatcaaggagcagggtgcc
ctgagctttgaacggcgctaccatgtcactgacccttttatccggcggctgggcctagaa
gcagagctgcagggtcactcaggatgtgtcaactgtctggagtggaatgaaaaaggagac
ttgctggcttctggctccgatgaccagcacacaattgtgtgggacccactgcaccataag
aagctgctctctatgcacacgggtcacactgcaaatatcttctctgttaagttcctgcct
catgctggggaccgaatcttgatcacgggagcagctgactccaaggtgcatgtccatgat
ctgacagtaaaggagaccatccacatgtttggagaccacacaaaccgagtgaagcgcatt
gccacggcgcccatgtggcctaatacattctggagtgctgctgaggatgggcttatccgc
cagtatgaccttcgggagaacagcaaacactcagaggtgctgattgacctgacggagtac
tgtggccagttggtggaagccaagtgtctcactgtcaacccccaagacaacaactgccta
gcagtgggggccagtgggcccttcgtgaggctgtacgacattcgtatgatccacaaccac
agaaagagcatgaagcagagtccttcagcaggtgtacacaccttctgtgaccgacagaag
ccccttccggatggtgcagcccagtattatgtagcaggacacttgccagtgaagatgcct
gactacaacaaccgtctgagggtgctggttgccacctatgtgaccttcagccccaacggc
acagagctgctggtcaacatgggtggagagcaggtctatttgtttgacctgacttacaag
cagcggccgtataccttcctcttgcctagaaaatgccattcctcaggggaagttcagaat
ggcaagatgaccaccaatggtgtatccaatggcgtttcgaatggcctacacctccacagc
aatggttttcgactgccggagactagggggcatgtcagcccccagatagaactgccccca
tacctggagcgtgtgaaacagcaggccaatgaggcttttgcctgccagcagtggacccag
gccattcagctttacagtaaagctgtgcagaaggcccctcacaacgccatgctctatgga
aaccgagcagctgcctacatgaaacgcaagtgggatggtgaccactacgatgctctgaga
gactgcctcaaggccatctccttaaatccatgccacctgaaggcacacttccgcctggcc
cgctgcctttttgagctcaagtatgttgctgaggctctggagtgtctggatgacttcaaa
gggaagttcccagagcaggcccacagcagcgcttgtgatgccttgggccgtgacatcacc
gctgccctcttctccaaaaatgatggtgaggagaagaagggagctggtggaggcccagtc
cgcctgcgcagcacgagccgcaaggactccatctcagaggatgagatggtgctgcgggag
cgaagctatgactatcagttccgctactgtggccactgcaacaccaccacggatatcaag
gaagccaatttctttggcagcaatgctcagtacatcgtcagtggctctgatgatggctcc
ttcttcatttgggaaaaggaaaccaccaacctagtccgtgtgctccaaggggatgagtcc
attgttaactgcctgcagccacatcccagctactgtttcctggccaccagtggcatcgat
cctgttgtgcggctctggaacccccggccagagagtgaagacctcacgggccgagttgtg
gaggacatggagggggcttcccaggccaaccagcggcgcatgaacgcagaccccctggag
gtgatgctgctcaacatgggctaccagattgcaggcctgagcagcgcgggtggcgctggg
gcctctgacgacgaggacagctctgagggccaggttcagtgccggcccagctag

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