Suncus etruscus (white-toothed pygmy shrew): 126011080
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Entry
126011080 CDS
T09902
Symbol
ZC3H12A
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126011080 (ZC3H12A)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
126011080 (ZC3H12A)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_2
zf-CCCH_4
zf_CCCH_4
UBA_N4BP1
Motif
Other DBs
NCBI-GeneID:
126011080
NCBI-ProteinID:
XP_049630731
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Position
6:complement(40051220..40059283)
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AA seq
571 aa
AA seq
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MSLWELEDHHSCQGSARPARVPTPEEAWAAELQMKVDFFRKLGYSSAEIHSVLQKLGVQA
DTNTVLGELVKHGSAAERERQASPDHSPQPPLVPRGGGPPKAPTLEPSPPKEDKDGSDLR
PVVIDGSNVAMSHGNKEVFSCRGILLAVNWFLERGHTDITVFVPSWRKEQPRADVPITDQ
HILRDLEKKKILVFTPSRRVGGKRVVCYDDRFIVKLAYESDGVVVSNDTYRDLQGERQEW
KRFIEERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPLPAEHRKPCPYGKKCTYGTK
CRFFHPERPSRPQRSVADELRANALLVPPRASSKDKSGRGPSPSSRPGSLPAEREDGKKV
GAHHEGMTHSFPPASRSLPAPASGGSFGPTDWVPQTPDSLPYMSQDCLDSGIGSLESQMS
ELWVGHRGSSGESGPPRGSYPGYSPYGAEPPAPSAFPAFRRPIGTGHFSVPADYAPPPAA
YPPREYWSEPYQLPPPTPVLQEPLPPVSGADRSSWAGADSLAKKRANVYTKLCGVFPQHL
VEAVMERFPQLLDPQQLAAEIISYKCPHLAD
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgagtctctgggaactggaagaccaccacagctgccaaggctctgcccggccagcccgg
gtgcccaccccagaggaggcatgggctgcggaactgcagatgaaggtggattttttccgg
aagctgggctattcctctgctgagatccacagtgtcctgcagaaattgggggtccaggca
gacaccaacacggtgctgggagagctggtgaagcatgggtcagcggccgagcgagagcgc
caggcctcaccggaccacagcccacagccccctctggttcctcggggagggggtcccccc
aaggcacccaccctggagccctctccccccaaggaggacaaggacggcagtgacctgaga
cctgtggtcatcgacggaagcaacgtggccatgagccatgggaacaaggaggtcttctcc
tgccggggcatcctgttggcagtgaactggttcctggagcgaggccatacagacatcaca
gtgttcgtcccatcctggagaaaggagcagccgagggccgatgtgcccatcacagaccag
cacatcctgcgggatctggagaagaagaagatcctggtattcacaccgtcgaggcgtgtg
ggaggcaagcgggtagtctgctatgatgaccgcttcattgtcaagctggcctatgagtct
gacggggtggtggtctccaatgacacctaccgcgacctgcagggtgagcggcaggagtgg
aaacgcttcatcgaggagcggctgctcatgtactccttcgttaacgacaagttcatgccc
cccgatgaccctttgggccgccacggaccaagcctggacaacttcttgcgaaagaagccc
ctcccagcagaacatcggaagccctgtccctatgggaagaaatgcacctacgggaccaag
tgccgattcttccaccccgagcggcccagccgtccccagcgctccgtggccgatgagctg
cgtgccaacgccctcctcgtacccccgagggcctcgagcaaggacaagagtggccgcggg
ccttccccttcttcccggccaggctctctgcccgcagagcgtgaggatgggaagaaggtg
ggggcccaccatgagggcatgacccacagctttccaccggccagcaggagcctcccagcc
ccagccagtgggggcagctttgggcccacagactgggtcccgcagaccccagactccctc
ccatacatgtcccaggactgcttggactcaggcattgggtccctagagagccagatgtca
gaactgtgggtggggcacaggggcagctctggggagtctggcccaccacggggctcgtac
ccagggtacagcccctatggggctgaacccccagccccctcagctttccctgcctttaga
cggccgataggcactggccacttcagtgtccctgctgactatgcgcccccaccagccgcc
tatccacctcgagaatactggtctgagccctaccagctgcctccccccacccctgtgctg
caggagcccctgcccccagtctcaggagctgacaggagctcctgggccggggcagacagt
ctggccaagaagcgagccaatgtgtacaccaaactatgtggcgtcttcccccagcacctg
gtggaggctgtcatggagcgcttcccgcagctcctggacccccagcagttggctgctgag
attatatcatacaagtgcccacaccttgctgactaa
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