Suncus etruscus (white-toothed pygmy shrew): 126011208
Help
Entry
126011208 CDS
T09902
Symbol
HMGCL
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr00280
Valine, leucine and isoleucine degradation
setr00650
Butanoate metabolism
setr01100
Metabolic pathways
setr04146
Peroxisome
Module
setr_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
126011208 (HMGCL)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
126011208 (HMGCL)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
126011208 (HMGCL)
Enzymes [BR:
setr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
126011208 (HMGCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
126011208
NCBI-ProteinID:
XP_049630899
LinkDB
All DBs
Position
6:53308661..53329444
Genome browser
AA seq
325 aa
AA seq
DB search
MATVRKALPRRLPGLTPFRAVSTSSMSDLPARVKIVEVGPRDGLQNEKNIVPTAVKIKLI
DMLSEAGLPVIEATSFVSPKWVPQMADHTEVLKGIQKFPGISYPVLTPNFKGFQAAVAAG
AKEVSIFGAASELFTKKNVNCSIDESFQRFDEVLKAARAASIPVRGYVSCVLGCPYEGKI
SPAKVAEVSKKLYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLTALAVHCHDTYGQ
ALANTLMALQMGVSVVDSSVSGLGGCPYAQGASGNLATEDLVYMLTGLGIQTGVNLQKLQ
DAGAFICQALNRKTSSKVTQATCKL
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagtgaggaaggcgctgccgcggagactaccgggcttgacgcccttccgggct
gtcagcacttcatctatgagtgatttacccgctcgggtgaaaattgtggaagttggtccc
cgagatggactacaaaatgaaaagaatattgtgccaactgcagtgaaaatcaagcttata
gacatgctttctgaagctggacttcccgttatagaagccactagcttcgtgtctcccaag
tgggtacctcagatggctgaccacactgaagtcttgaagggcatccagaaatttcctggc
atcagttacccagtcctgaccccaaatttcaaaggcttccaggctgcggttgctgctgga
gccaaagaagtgagcatttttggagctgcctcagagctcttcaccaagaagaatgttaac
tgctccatcgatgagagttttcagcggtttgatgaagttttgaaggcagctcgggcagcc
agtatccctgtgcgagggtatgtctcctgtgtgcttggatgcccctacgaagggaagatc
tccccggctaaagtagctgaggtctctaagaagttgtactcaatgggctgctatgagatc
tccctgggtgacaccatcggcgtaggcacacctggcatcatgaaggacatgctgtctgca
gtcatgcaggaggtgccattgactgcccttgctgtccactgccatgatacctatggccag
gccctggccaacaccttgatggccctgcagatgggtgtgagtgttgtggattcttctgtg
tctggacttggaggctgtccatatgcacaaggggcttcaggaaacttggccacggaggac
cttgtctacatgctaactggcttaggcattcaaacgggtgtcaacctccagaagctccaa
gatgctggtgcctttatttgccaagccctaaatagaaaaaccagctccaaagtgactcaa
gctacttgtaaactgtaa
DBGET
integrated database retrieval system
