Suncus etruscus (white-toothed pygmy shrew): 126011510
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Entry
126011510 CDS
T09902
Symbol
EXOSC10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126011510 (EXOSC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126011510 (EXOSC10)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
126011510 (EXOSC10)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
126011510
NCBI-ProteinID:
XP_049631257
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All DBs
Position
6:complement(6201040..6223728)
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AA seq
894 aa
AA seq
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MAPPSPREPKAPPAAIATKPETEMMLPGFPDADSFVKFALGSVVAVTKASGGLPQFGDEY
DFYRSFPGFQAFCETQGDRLLQCMSRVMQYHGCRSSLKDRSKVTELEDKFDLVVDTNDVI
LERVGILLDEASGVNKNQQPVLPTGLQVPKTIVSSWNRKAGEYSSKKSKSETFRLLHAKN
IVRPQLKFREKIDNSNTPFVPKIFIKPNAQKPLPLGLSKERREHPKDRPEDLDVPPALAD
FLHQQRTQQVEQDMFAHPYQYELDHFTPPDSALQKPQPQDYKPVEDTPCHFVTSLEKLVE
LNEKLLACQEFAVDLEHHSYRSFLGMTCLMQISTRTEDFVVDTLELRSDMYILNESFTDP
AIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLRLYCNVESNKQF
QLADWRIRPLPEEMLRYAREDTHYLLYIYDRMRMELWARGNEQPVQQQLVWQRSRDICLK
KFTKPIFTDESYLDLYKKQKKHLNTQQLTAFQLLFAWRDKTARREDESYGYVLPNHMMLK
ISEELPKEPQGIVACCSPIPPLVRQQLNELHVLIQQAREMPLLKSEVPTGGRKSGPQPNP
ERLENVLFGPHDCSHAPSDGSLVMPANGPVPVRKQASLFQDQQDQEPPEAPSYLLTTATL
SLFNEPSAEEDANVPLTTAQKKARSILESFENPFRMFLPVLEHHAHISQAAKFDPSSKIY
EISNRWKLASQAQAQKDARDATKKKAAEPTAAQDKALDVLPKTEEEPEAAAQALSVRQQI
ALENAKKRERTTSDPRATEQKQEKKRPKTSKKPKDPEEAPEKDFTPFDYSKSDFKAFAGN
NRSSPASQFDPNKQTLTGKKCLSAKKLKQTTGNKSMSFPTGKSDRGFRHNWPKR
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcccagtccccgagaacccaaggccccgccggctgcgatcgcgaccaagcct
gagacggagatgatgctgccgggcttcccggacgccgacagcttcgtgaaatttgctctc
ggatcagtggtagctgtgaccaaggcatctgggggcctgcctcagtttggtgacgagtat
gacttttaccgaagttttcccggcttccaggcattctgtgagacacagggagacaggctg
ctgcagtgcatgagcagagtcatgcagtaccacgggtgtcggagcagcctcaaggaccga
agcaaagtgacggagctggaagacaagtttgacttagtggtggacaccaacgatgtcatt
ctggaacgagtgggcatcctcctggatgaagcttcaggcgtgaataagaaccagcagcct
gtcctccccacgggactgcaggtccccaaaaccatcgtgtctagctggaaccgtaaggca
ggagaatacagcagcaagaaaagcaagtcagaaacattccggctgcttcatgccaagaac
atcgtccggccccagcttaagttccgcgagaagattgacaattccaacaccccgtttgtc
cccaagatcttcatcaagcccaatgcccagaaaccactccctctggggctgtctaaggag
cggcgagagcaccccaaggaccggcccgaggacctggatgtgcctcctgccctggccgac
ttcctccaccagcagaggactcagcaggtggagcaggacatgtttgcacatccgtatcag
tatgagctcgaccacttcactcccccggactcggcacttcagaagccgcaaccccaggac
tataagcccgtggaggatacaccttgtcactttgtgacctcgctggagaaactcgtggag
ctcaatgagaaactcctggcctgtcaggagttcgctgtggacttggagcatcactcgtat
cggagcttcctgggcatgacctgcctgatgcagatctccactcgcaccgaggactttgtc
gttgacactctggagcttcgcagtgacatgtacatcctgaacgagagcttcaccgaccct
gccatcgtcaaggtcttccacggagctgactctgacatcgagtggctccagaaggacttc
ggcttgtacgtagtgaacatgttcgacacccaccaggcggcgcgtctgctcaacctgggc
cgccactccctggaccacctgctgcggctttactgcaatgtggagtccaacaagcagttc
cagctggcagactggagaatacggcctctgcccgaggagatgctcaggtatgcccgcgag
gacacccactacctgctctacatctacgaccgcatgaggatggagctctgggcccgcggc
aatgagcagccagtgcagcagcagttggtgtggcagcggagccgggacatctgtctcaag
aaattcaccaagcccatcttcacggacgagtcctaccttgatctgtacaagaagcagaag
aagcatctcaatacacagcagctcacggccttccagctgctatttgcctggagggacaag
actgcgcggagggaggacgagagttatggatatgttctgccgaaccacatgatgctgaag
atctctgaggagctgcccaaggaaccccagggcatcgttgcctgctgcagccctatccca
ccgctcgttcggcagcagctcaacgaactgcacgtgctcatccagcaagcccgggaaatg
cccctgctcaagtcagaagtccccaccggagggaggaagagcggcccgcagcccaatccc
gagagactggagaacgttctctttgggcctcacgactgctctcatgccccatctgatggc
tctctggtcatgcctgccaatgggcctgtgccagtgaggaaacaggccagtctcttccag
gaccagcaggaccaggagcccccagaggcccccagctacctcctcaccaccgccaccctc
tccttatttaacgagcccagtgctgaggaagatgccaacgtccccttaactacagcccag
aagaaagcccggagcatcctggagtcctttgagaacccctttcgaatgtttctgcccgtg
ctggagcaccacgctcacatctcgcaggcagccaagttcgacccgtcctccaagatctac
gaaatcagcaaccggtggaagctggctagtcaggcccaggctcagaaggatgccagagat
gccaccaagaagaaagcagccgagcccacagctgcccaggacaaggccctggacgtcctg
cccaagacggaggaggagccagaagccgctgcacaagccctgtccgtgcgccagcagatt
gctctggaaaatgccaagaagagagagcgaaccaccagtgaccccagagccaccgaacag
aaacaagagaagaagcggccgaaaacctccaagaagcccaaggaccctgaggaggcgcct
gagaaagactttacccctttcgactacagcaagtccgacttcaaagcctttgccggaaac
aacagatcctcgcccgcctcccagttcgaccccaataagcagaccctgactggcaagaaa
tgcctctcagccaagaaactcaaacagaccacagggaacaagagcatgtccttcccgacg
ggcaagtcggacagagggttcaggcacaactggccgaagagatag
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