KEGG   Suncus etruscus (white-toothed pygmy shrew): 126011519
Entry
126011519         CDS       T09902                                 
Symbol
PLOD1
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 1
  KO
K00473  procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [EC:1.14.11.4]
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr00310  Lysine degradation
setr01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:setr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    126011519 (PLOD1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:setr04147]
    126011519 (PLOD1)
Enzymes [BR:setr01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.4  procollagen-lysine 5-dioxygenase
     126011519 (PLOD1)
Exosome [BR:setr04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   126011519 (PLOD1)
SSDB
Motif
Pfam: GT_PLOD 2OG-FeII_Oxy OGFOD2-like Anp1 2OG-FeII_Oxy_3
Other DBs
NCBI-GeneID: 126011519
NCBI-ProteinID: XP_049631274
LinkDB
Position
6:6997321..7028631
AA seq 726 aa
MRALLLLGPLGCLLLARAEGDARPEDNLLVLTVATKETEGFRRFKRSAQFFNYKVQSLGL
GQDWPGKEVAAGGGLKVRLLRKALEKLEDQENLVVLVTDSYDVVFAAGPRELLKKFRQAK
SRVVFSAEELIHPDRRLEAKYPAVPDGKRFLGAGGFIGYAPNLSKMVAEWDGQDSDSDQL
FYTKIFLDPEKREQLNITLDHRCRIFQNLDGALDEVVLKFEKGHVRARNLVYDTLPVLIH
GNGPTKLQLNYLANYVPRFWTFETGCVVCEEGLRSLKGIADEALPIVLVGVFIEQPTPFL
SLFFQRLLRLQYPRKQMRLFIHNNEQHHKAQVEDFLAEHGSDFRSVKLVGPEMRLHNAEA
RNMGADLCRQDRGCTYYFSLDADVALTEPKALRLLMEQNKNVIAPLMSRPGRLWSNFWGA
LSADGYYARSEDYVDIVQGRRVGVWNVPYISSVYLIKGSILRAELQHPALFQHSRLDADM
SFCANVREQDVFLFLTNRHAFGHLLSLDSYQTTHLHNDLWEVFSNPEDWKEKYIHENYTR
ALEGKLVETPCPDVYWFPIFTETACDELVEEMEHYGQWSVGDNKDNRIQGGYENVPTIDI
HMNQISFEREWHKFLVEYIAPMTEKLYPGYYTRAQFDLAFVVRYKPDEQPSLMPHHDAST
FTINIALNRVGIDYEGGGCRFLRYNCSVRAPRKGWTLMHPGRLTHYHEGLPTTKGTRYIA
VSFVDP
NT seq 2181 nt   +upstreamnt  +downstreamnt
atgcgggccctgctgctcctgggcccgttgggctgcctgctgctggcccgggccgagggc
gatgcgcggccggaggacaaccttctagtcctcacggtggccaccaaagagaccgagggt
ttccggcgcttcaaacgctctgcccagttcttcaactacaaggtccagtcactgggcctg
ggacaggactggccagggaaggaggtggcagcaggtggaggcctaaaagtacggttgcta
cggaaagctcttgaaaagcttgaggaccaggagaacctagtggtgctggtcacagacagc
tatgacgtggtgtttgctgcggggcctcgggagctcttgaagaagtttcggcaggccaaa
agccgggtggtcttctcggcggaggagctcatccaccccgaccgcaggctggaggccaag
tacccggctgtgcctgatggcaagaggttcctgggcgctggaggtttcattggttatgct
cccaacctcagcaagatggtggccgagtgggacggccaggacagcgacagtgaccagctc
ttctacaccaagatcttcctggatccggagaaaagggagcagctcaatatcaccctggac
caccgctgccgaatcttccagaacctggatggagccttggatgaggtcgtgctcaagttc
gagaagggccatgtgagggcgaggaacctggtctatgacaccctcccggtcctaattcat
ggcaatgggcccaccaagttgcagctaaactatttggctaactatgtgccgcgcttctgg
accttcgagacaggctgcgtggtgtgtgaagagggcctgcgcagtctcaaaggcattgcg
gatgaagctctgcccatagtgctggttggcgtgttcatcgagcagcccacaccgtttctc
tccctgttcttccagcggctcctgcgccttcaatacccccggaaacagatgcggcttttc
attcacaacaatgagcagcaccacaaggcccaggtggaggacttcctggctgaacatggc
agcgatttccggtctgtgaaactggtggggcctgagatgcggctgcacaatgcagaggcc
aggaacatgggcgcagacctgtgccgacaggaccgaggctgcacctactacttcagcttg
gacgctgatgtggccctgacagagcccaaagccctgcggctgctgatggagcagaacaag
aatgtcatcgcccccttgatgagccgcccagggaggctgtggtccaacttttggggggca
ctgagtgcagatggctactatgcccgctctgaagactacgttgatattgtgcagggccgc
cgagtgggtgtctggaacgtgccctacatctccagcgtctacctgatcaagggcagcatc
ctgagggccgagctgcagcacccagccttgttccagcacagccggctggatgccgacatg
tccttctgtgccaacgtccgggagcaggatgtgttcctcttcctgaccaaccgccatgcc
tttggccacctgctctccctggacagttaccagaccacccacctgcacaatgacctctgg
gaggtgttcagtaacccagaggactggaaggaaaagtacattcacgagaactacaccagg
gccctggagggaaaactggtagagacaccttgccccgatgtctactggttccccatcttc
acggagactgcctgtgacgagctggtggaggagatggagcactatggccagtggtctgtg
ggtgataacaaggataatcgcatccagggtggttatgaaaacgtgccaaccatcgacatc
cacatgaaccagatcagcttcgagcgggagtggcacaagttcctggtggagtacatcgcc
cccatgactgagaagctctaccccggctactacaccagggcccagttcgacctggccttt
gttgtccgctacaagcctgacgagcagccatcactgatgccgcaccacgatgcctccacc
tttaccatcaacatcgccctgaaccgggtggggatagattatgagggtgggggctgtcgg
ttcctacgctacaactgctccgtccgagccccacgaaagggctggaccctcatgcacccc
gggagactcacgcactaccacgaagggctccccaccaccaagggcacccgctacatcgct
gtctccttcgttgatccctaa

DBGET integrated database retrieval system