Suncus etruscus (white-toothed pygmy shrew): 126011589
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Entry
126011589 CDS
T09902
Symbol
NPHP4
Name
(RefSeq) LOW QUALITY PROTEIN: nephrocystin-4
KO
K16478
nephrocystin-4
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
setr03037
]
126011589 (NPHP4)
Cilium and associated proteins [BR:
setr03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
126011589 (NPHP4)
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NCBI-GeneID:
126011589
NCBI-ProteinID:
XP_049631365
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Position
6:complement(2851482..2877994)
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AA seq
1410 aa
AA seq
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MGEWQQALEQSVVVPPHPQRLRQPPKESRAFQCILKSLDGAPVTQGVLESPSESRCHLRV
TLFDITYRHFFGKTWRTPSRPVQFLAGSPPRVVFNEPLYFHTSLDHPHIVAVVEAVTESR
KRDGSPQALACGFGLLRLFSGKPESPSSAASQDKRLKLYHGTPRALLHPLLLDPIEHNKH
LHSVEGCSLRYSLQPHPPLESAFPLVPENLLLSGHQPVPGLLPGPRNLGDALRKPRLQKT
VTWYLDDVSFTLYPSLEKFEEELLELLTSDHLHEGGTASAGGTLQVLERRLHVGVHSGLG
FVHRPQVLVLVPEREVALTRSASCRRRLEATAKASPGNQALVSRSRLRLPEVAPHPTFTI
VFQLEYVLSSPAAADGHGAAPSLSIMHMVRWAAWSPPPGPDCRTVTVPLQGGTRPNPSRC
LAFKVPSASRSSEEVQQVESGTIRFRASMDPETRPNMPTSPRPEPEPEQRVTKKPSSPST
PPPQRLAAPYDSPMGPGLSLSQLAASPAQQHCDGSPRPSSETAPAPQELPWAGAVSHLEA
ELSPAQLLPGVTPPFVPLLHAPIAAGTPSRGLGRKPSRAALLRLQASGCSPILDAEQLPA
EDVDPVGPVSFSPRKEEADPLQGNDILLCFLAFSRVPQTPQGTPWPSTIYLTFQFYRFPP
ATTPRLQLVELEGSGDGSSGSVSHILVPVAKDPSCHPGAPGFQLQYRVDHGFLRPGELGR
FAHYLATHSLQIDVWDGDSLLLVGSTAAPMKHLPRQGRPAVQVSLELDVLATEYMQDTTV
LSGDLIGRGGIKPLGVHTELRGRLHLTMANVGRLCERSARADSAGPSPQTRVISSDAAAS
FSGSGLLLAGGSRSLKNVVRAQRLADVASDLAALLVTPRPQERAGPRAAEAEALRRRKLD
RMRAVRLREAGQAGARGTSMLARQRALAQHARDLQVVAAYRERTKAQSIADALSRAVTAR
HTLHATMGTAEFFEFALRNPHHAPHTVTIEIDDPRAQVRVVVDSREWRHLKAAAGLHTPL
EENMFPPTNGRAPQLYLRPRETAHVPFKYQSFSLGRAHSQSPGIPSTEKDADVGSPVPSP
TSGDTSRQVQVVFRAAGRPLAVLNLTVAPQPHAVDQVFRFYQPELTFLKKAIRLPPWHTL
PGAPVGMPGEEPPVHVRCSDPNVICETQSVGPGEPRDVFLKVASGPSPETRDFFVAVYTD
PWLATPAQIWEVHVHSLQRVDVSCVTGQRTRLSLVLRGTQAARNVRAFTSNPQELTTDPQ
GVFVLPPLGVLDLHVAVWPRRPGSRFLLLHVVDVDWHQLVASWLVGLSCHPPVISKAFEI
RLAVGDRQGVQKRITYTNPYPGPRAYNLLSDRPDRLRFREDAFQVGAGETYTIGLCFLPA
TSPGEEEILIYINDHEDKTEETFCVKVISK
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagtggcagcaggcgttggagcagagtgtggtggtgcccccccacccccagagg
ctgcgccagccccccaaagaatccagggccttccagtgcatcctcaagtcactcgatggt
gcccccgtcactcagggcgtgctggagtcaccttccgagtcccgctgccacctgcgtgtg
acgctcttcgacatcacgtaccggcacttcttcgggaagacgtggaggacaccatcgagg
cctgtccagttccttgcagggtctccacccagggtggtcttcaatgagcccctgtatttc
cacacgtccttggaccacccccacatcgtggccgtggtggaagcagtcaccgagtcccgg
aagcgggacggcagcccccaggctctggcatgtggctttgggcttcttcggctcttcagt
ggcaaacctgagtctccgagctcagccgcctcgcaggacaaacggctgaagttgtaccac
ggcacccccagagctctgctgcacccactcctgctggatcccatcgaacataacaagcac
ctgcactccgtggagggctgctctctgcgctacagcctgcagccacacccgccgctcgaa
tccgccttcccacttgttcccgaaaacctgctgctgtcgggtcaccagcctgtccccggc
ctgctccccggccccagaaacctgggggacgccctccggaagcctcgccttcagaagacg
gtcacctggtacctagatgacgtgtccttcaccctgtacccttctttggagaagtttgag
gaggagctgctggagctgctgaccagcgaccacctccatgaggggggcaccgcgtcggcc
ggtggcactctgcaggtcctggagcggcggctgcacgtgggtgtccacagcgggctgggc
ttcgtgcacaggccccaggtgctggttctggtgccagagcgtgaggtggccctgacgcgc
tctgccagctgcaggaggaggttggaagccactgccaaggccagccctggcaaccaggct
ctggtgtcgaggagccgcctgcgactgcccgaggtggccccgcaccccaccttcaccatc
gtcttccagctggagtatgtgctgagcagccctgcagcggctgatggccacggtgctgct
ccctcactgtccattatgcacatggtccgctgggccgcctggagcccgccgccggggccc
gactgcaggacagtgaccgtgcctctccaaggtggcacccggcccaacccttctcgctgc
ctcgcattcaaggtgccctcggccagcaggagctctgaggaggtgcagcaggtagagtca
ggcaccatccggttccgggcctcgatggaccccgaaacacgccctaacatgcccacgagc
cctcggccagagccagagccggagcagcgggttaccaagaagccatccagcccgtccacg
cctccaccccagaggcttgccgccccctacgactccccgatggggcctgggctgtccctc
tcccaactggctgcgtccccagctcagcagcactgcgatgggtccccccgccccagctct
gagaccgccccggccccgcaggagctgccatgggccggggccgtgtcgcacctggaggcc
gagctcagccccgcccagctgctccctggggtgacgccacccttcgtcccgctgctgcac
gcccccattgctgcagggaccccgagccgcggcctggggcggaagccctctcgggcagcc
ttgctccggctccaggcctcaggctgctccccaatcctggatgccgagcagctgccggct
gaggacgtggatcccgtgggccccgtgagcttcagcccccgaaaggaggaggcggatcca
ctccagggcaacgacatcctcctgtgcttcctggccttcagccgggtgccccagacgccc
caggggactccgtggccctcgaccatctacctcactttccagttctaccgcttccccccg
gccaccaccccacggctgcagctggtggagctcgaagggtccggggatgggagctcgggc
tctgtgtcccacatcctggtcccagttgccaaagacccctcctgccacccaggggctccg
ggcttccagctgcagtacagggtggaccatggcttcctgcgacctggggagctgggccgc
ttcgcccactacctggccacgcacagcctgcagatcgacgtgtgggacggggactctctg
ctccttgtgggatccaccgcggcacccatgaagcacctgccccgccagggccgcccggcc
gtgcaggtctcactggagctggacgtcctggctaccgagtacatgcaagacaccacggtg
ctgagtggtgacttgattggccgtgggggcatcaagcccctcggtgtccacacggagttg
aggggccgactgcacctgaccatggccaatgtgggccgcctgtgtgagcgaagcgccagg
gccgacagtgccgggccatcgccccagacccgtgtcatctccagcgatgcggctgccagc
ttctcgggcagcggcctcctcttggctgggggctccagatccctgaaaaatgtggtccgg
gcccagaggctggcagacgtggcctctgacctggctgccctgctggtcactccccggccg
caggagcgcgctgggccacgggcagctgaggctgaagcccttcgccggcgcaagctggac
cggatgcgggcggtgcggctgcgagaggccgggcaggctggcgcccgggggaccagcatg
ctggcccggcagcgcgctctggcccagcacgcccgcgacctgcaggtggtggcggcctac
cgcgagcgcaccaaggcccagagcatcgccgatgccctcagccgggctgtgaccgcccgc
cacacactccacgccacgatgggcaccgccgagttcttcgagtttgcgctccggaacccg
caccacgcgccgcacacggtgaccatcgagattgatgaccccagagctcaggtgcgcgtg
gtcgtggacagccgggagtggcgccatctgaaggccgcggctgggctgcacacaccactg
gaggagaacatgttccccccgacgaacggccgagccccacagctctaccttcgcccccgg
gagacagcccatgtccccttcaagtaccagagcttctcgctgggccgggcccactcgcag
agcccaggcatacccagcaccgagaaggatgcagatgtggggtcccctgtaccatccccc
acatccggtgacacgtctaggcaagtccaggtggtgttccgcgcggctggcagacccctg
gctgtgctgaacctgacggtggccccccagccgcatgccgtggaccaggtgttccgcttc
taccagcccgagcttaccttcctgaagaaggccatccgcctgccaccctggcacacgctg
ccaggggctcctgtgggaatgccgggggaggagcccccagtccacgtccgatgcagtgac
cccaacgtcatctgtgagacgcagagtgtgggtcccggtgagcctcgggatgtgtttctg
aaggtggccagtggccccagccctgagaccagagacttctttgtcgctgtttacacggac
ccctggctggccactcctgcacagatctgggaagtccacgtacactccctgcagcgtgtc
gatgtctcctgcgtcaccggccagcggacccgcctgtccctggtcctgcgggggacacag
gccgccaggaacgtgagggccttcacctcgaacccccaggagctgacgacggacccccag
ggcgtgtttgtgctgccgcctctcggggtgctggacctgcacgtggctgtgtggccccgg
cggccgggcagccgcttcctgctcctgcacgtggtcgacgttgactggcaccagctcgtg
gcctcatggctcgtgggcctgtcctgccacccaccggtcatctccaaggcctttgagatc
cggctggccgtgggggacaggcagggggtgcagaagcgcatcacctacaccaacccgtac
cccggcccaagggcctataacctgctcagtgaccggcctgaccgcctgcgcttccgggag
gatgctttccaggtgggggcaggggagacctacaccatcggattgtgcttcctgccggcc
accagcccgggagaggaggaaattctcatctacatcaatgaccacgaggacaagactgag
gagactttttgtgtcaaggtcatctcaaaatga
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