Suncus etruscus (white-toothed pygmy shrew): 126011735
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Entry
126011735 CDS
T09902
Symbol
SDC3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04514
Cell adhesion molecules
setr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
126011735 (SDC3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
126011735 (SDC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
setr00535
]
126011735 (SDC3)
Proteoglycans [BR:
setr00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
126011735 (SDC3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
126011735
NCBI-ProteinID:
XP_049631500
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Position
6:46607651..46643300
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AA seq
635 aa
AA seq
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MVPTRITQMPPEPPPVQVGTLPWPQPPRNHWRPVLGGSGWTRDVLGDLRGAGCECLARQG
VRGRGGRGSGYGGRGSGAAPARVEAWGAGLGVRGGAPTPAPPRAPPPRSARAGGGRRRRR
RTLPAGAAAGRGAARRGEARRGEARRSRAAEPEPRAEPPRAAPRRAAPRRASAPAAEQPP
RARARSGTKGAAAMKPGPPHRAGAAHRAGAGARSAAGPGARGLLLPPLLLLLLAGRAAGT
QRWLSENFERPVDLEGSGDDDAFPDDELDDLYSGSGSGYFEQESGIETAIRFSPDVALAV
STTPAVLPTVDIQPMGTPFEEVSSEQPTPEPATSPPIVTTVPEEPSQSATTISIPTATPA
ATTPEVPTVAVVPATVATTTPSIPAAPPSTATTSVIRTTGIQRLLPLPLTTAATARATTP
EAPSPPTTVVILDTEAPTPRLVSTATSRPRALPRPATTPEPAIPEETTLPLRATVPEPTE
PAQTPTPEFFLTTVQEEPEVPVSGGPSGDFELAEEETTQPDTANEVVAVGGAAARPSPPT
GTLPKGARPGPGLLDNAIDSGSSAAQLPQKSILERKEVLVAVIVGGVVGALFAAFLVTLL
IYRMKKKDEGSYTLEEPKQASVTYQKPDKQEEFYA
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggtgccaacaaggataacacaaatgccccctgaacccccacctgtccaggtggggacc
ctgccgtggccccaaccacccaggaaccattggaggcctgttttggggggctccgggtgg
acccgggatgtgctgggggatttgaggggcgcggggtgcgaatgcctggcaaggcagggg
gtgcggggccggggagggcgggggtcagggtatgggggtcggggctcgggggcggcgccg
gcgcgggtggaggcgtggggcgcggggctcggggtgcgggggggggcgcccacaccagcc
ccgccccgcgcccctcctccccgctccgcccgcgctgggggcggccggcggcggcggcgg
cgcacgcttcctgcgggcgcggctgctgggcgcggagctgcgaggcgaggcgaggcgagg
cgaggcgaggcgaggcggagccgggccgcggagccggagccccgagccgagccgccccgc
gctgcgccgcgccgcgccgcgccgcgccgcgcgtccgctcccgccgccgagcagccgccc
cgcgcccgcgctcggtcgggaacaaaaggcgctgccgccatgaagccggggccgccgcac
cgagccggggccgcgcaccgggctggcgcgggggcccgatcggcggccgggcccggggcc
cgcgggctgctcctgccgccgctgctgctgctgctgctggcgggccgcgccgcggggact
cagcgctggctcagtgagaactttgagagaccagtggacctcgaaggctccggggatgat
gacgccttccccgatgatgagctggatgacttgtactcggggtctggctcaggctacttc
gagcaggagtcgggcatagagacagccatacggttcagcccagatgtggccctggcagta
tccaccacccctgctgtgctgcccactgtggacatccagcccatgggcaccccattcgaa
gaggtctcctctgagcaacccacaccggaaccagccaccagccctcctatagtgacgacg
gtcccagaggagcccagccagagcgccaccactatctccatacccacagctactcctgct
gccaccacacccgaggtcccaactgtggctgtagtgcctgccacagtggccaccactacc
cccagcatccctgcggcacccccttccacggccaccacctccgtcataaggaccaccggc
attcagaggctcctgcctcttccactgaccacagcagccacagcccgggccaccacgcca
gaggcaccctcaccgcccaccacagtggtcatcttggacacagaggccccaacacccagg
ctggtcagcacagctacctccaggcccagggcccttcccaggccagctaccaccccggag
cctgccatccctgaggagaccaccctgccactgcgcgccacggtcccagagcccacagag
ccagctcagactccaactccagagttcttcctcaccacagtccaggaggaaccagaggtg
ccagtgagtggggggcccagcggggactttgagctggcagaggaagagaccacgcagcca
gacacggccaatgaggtggtggctgtgggaggagctgcagccaggccgtcacctcctact
gggacgctacccaagggtgctcgcccaggccctggcctcctggacaatgccattgactcg
ggcagctcagcggctcagctgcctcagaagagcatcttggagcggaaggaggtgctcgta
gccgtgattgtgggcggggtggtaggtgccctcttcgccgccttcctcgtcacgctgctc
atctaccgcatgaagaagaaggacgagggcagctacacgctggaggaacccaagcaggcg
agcgtcacgtaccagaagcctgacaagcaggaggagttctacgcttag
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